FC925307

Overview
NameFC925307
Unique NameFC925307
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925307 vs. ExPASy Swiss-Prot
Match: KAD_NAUPA (Adenylate kinase OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=adk PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.267e-26
Identity = 71/183 (38.80%), Postives = 100/183 (54.64%), Query Frame = 1
Query:  208 LGGPGSGKGTQCANIVEHFG--YTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTK----IEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYETKGKVRKIDAAKPVAEVFDAVKAVFTPK 738
            +G PGSGK T    I E       H S GDLLRAE+ SGSE G  I++ I  G +VP E+ I  ++ A+E++  D  LIDGFPR+ E   A + + K    IE   V+  + SE+    R+L R +G  DDNVE    R KVF E    +  +Y  +GK+ KI+  + + E+ D ++ V   K
Sbjct:    8 IGAPGSGKTTDAELIAERNSDKIVHYSTGDLLRAEVASGSELGQTIKSYIDNGNLVPLEIVINTIKSAIEKAPKDIVLIDGFPRSVEQMKALDEMLKNTDDIELVSVIEVEVSEDVARERVLGRARG-ADDNVEVFNNRMKVFTEPLKDIQDFYSAQGKLIKINGERTIEEIVDEMEQVIKEK 189          
BLAST of FC925307 vs. ExPASy Swiss-Prot
Match: KAD_XANCP (Adenylate kinase OS=Xanthomonas campestris pv. campestris GN=adk PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.685e-26
Identity = 65/176 (36.93%), Postives = 110/176 (62.50%), Query Frame = 1
Query:  208 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEA-VTKI-EP-EFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYETKGKVRKIDAAKPVAEVFDAV 717
            LG PGSGKGTQ A + + F   H+S GDLLRAE+ +GS  G   + ++  G +V  E+ + +L+  + ++   + F++DG+PRN     A ++ ++KI +P + V+  D + E +  RI  R   +GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + +
Sbjct:    6 LGPPGSGKGTQAARLKDTFQIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDEILLGMLEARLGQADVANGFILDGYPRNVAQANALDSLLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLERI 181          
BLAST of FC925307 vs. ExPASy Swiss-Prot
Match: KAD_XANC8 (Adenylate kinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=adk PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.685e-26
Identity = 65/176 (36.93%), Postives = 110/176 (62.50%), Query Frame = 1
Query:  208 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEA-VTKI-EP-EFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYETKGKVRKIDAAKPVAEVFDAV 717
            LG PGSGKGTQ A + + F   H+S GDLLRAE+ +GS  G   + ++  G +V  E+ + +L+  + ++   + F++DG+PRN     A ++ ++KI +P + V+  D + E +  RI  R   +GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + +
Sbjct:    6 LGPPGSGKGTQAARLKDTFQIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDEILLGMLEARLGQADVANGFILDGYPRNVAQANALDSLLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLERI 181          
BLAST of FC925307 vs. ExPASy Swiss-Prot
Match: KAD_XANCB (Adenylate kinase OS=Xanthomonas campestris pv. campestris (strain B100) GN=adk PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.286e-26
Identity = 65/176 (36.93%), Postives = 109/176 (61.93%), Query Frame = 1
Query:  208 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEA-VTKI-EP-EFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYETKGKVRKIDAAKPVAEVFDAV 717
            LG PGSGKGTQ A + + F   H+S GDLLRAE+ +GS  G   + ++  G +V  E+ + +L+  + ++   + F++DG+PRN     A ++ ++KI +P + V+  D + E +  RI  R   +GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV   +
Sbjct:    6 LGPPGSGKGTQAARLKDTFQIPHISTGDLLRAEVAAGSPLGVKAKEVMARGDLVSDEILLGMLEARLGQADVANGFILDGYPRNVAQANALDSLLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLKRI 181          
BLAST of FC925307 vs. ExPASy Swiss-Prot
Match: KAD_XANC5 (Adenylate kinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=adk PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.072e-25
Identity = 65/176 (36.93%), Postives = 108/176 (61.36%), Query Frame = 1
Query:  208 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKI-EP-EFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYETKGKVRKIDAAKPVAEVFDAV 717
            LG PGSGKGTQ   + + F   H+S GDLLRAE+ +GS  G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN  +  A  E + KI +P + V+  D + E +  RI  R   +GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + +
Sbjct:    6 LGPPGSGKGTQATRLKDTFDIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALDELLGKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLERI 181          
BLAST of FC925307 vs. ExPASy Swiss-Prot
Match: KAD_XANAC (Adenylate kinase OS=Xanthomonas axonopodis pv. citri GN=adk PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.072e-25
Identity = 65/176 (36.93%), Postives = 108/176 (61.36%), Query Frame = 1
Query:  208 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKI-EP-EFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYETKGKVRKIDAAKPVAEVFDAV 717
            LG PGSGKGTQ   + + F   H+S GDLLRAE+ +GS  G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN  +  A  E + KI +P + V+  D + E +  RI  R   +GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + +
Sbjct:    6 LGPPGSGKGTQATRLKDTFDIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALDELLGKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLERI 181          
BLAST of FC925307 vs. ExPASy Swiss-Prot
Match: KAD_CORU7 (Adenylate kinase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=adk PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.072e-25
Identity = 66/173 (38.15%), Postives = 102/173 (58.96%), Query Frame = 1
Query:  208 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYETKGKVRKIDAAKPVAEVFDA 714
            LG PG+GKGTQ   + +     H+S GDL RA I  G+E G   Q  +  GK+VP+EVT  +++  +EE+   + FL+DGFPR  E     E + K   ++ + V+ +  SE+ +  R+L+R  GR DDN  TIR R +V+ E + P++ YY+  G++  IDA   V ++ +A
Sbjct:    6 LGPPGAGKGTQAQLLSDALNIPHISTGDLFRANISQGTELGKQAQEYMDAGKLVPTEVTANMVRARLEEADAANGFLLDGFPRTIEQADLLEEMLKEKDLKLDAVINYQVSEDVVVERMLSR--GRNDDNESTIRTRLQVYREETAPLIDYYQ--GRILNIDAEGSVEDISEA 174          
BLAST of FC925307 vs. ExPASy Swiss-Prot
Match: KAD_XANOR (Adenylate kinase OS=Xanthomonas oryzae pv. oryzae GN=adk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.400e-25
Identity = 64/177 (36.16%), Postives = 109/177 (61.58%), Query Frame = 1
Query:  208 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKI-EP-EFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYETKGKVRKIDAAKPVAEVFDAVK 720
            LG PGSGKGTQ   + + F   H+S GDLLRAE+ +GS  G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN  +  A    ++KI +P + V+  D + E +  RI  R   +GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + ++
Sbjct:    6 LGPPGSGKGTQATRLKDTFEIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALCALLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLTRVDGVGSLDEVLERIR 182          
BLAST of FC925307 vs. ExPASy Swiss-Prot
Match: KAD_XANOM (Adenylate kinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=adk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.400e-25
Identity = 64/177 (36.16%), Postives = 109/177 (61.58%), Query Frame = 1
Query:  208 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKI-EP-EFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYETKGKVRKIDAAKPVAEVFDAVK 720
            LG PGSGKGTQ   + + F   H+S GDLLRAE+ +GS  G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN  +  A    ++KI +P + V+  D + E +  RI  R   +GREDDN E++RKR +V+ +S+ PV+ +YE +GK+ ++D    + EV + ++
Sbjct:    6 LGPPGSGKGTQATRLKDTFEIPHISTGDLLRAEVAAGSPLGLKAKEVMARGDLVSDDILLGMLEARLGQADVAKGFILDGYPRNVAQANALCALLSKIGQPLDAVVQLDVASELLVERIAGRAKAEGREDDNPESVRKRLQVYTDSTAPVIGFYEQRGKLTRVDGVGSLDEVLERIR 182          
BLAST of FC925307 vs. ExPASy Swiss-Prot
Match: KAD_THEEB (Adenylate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=adk PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.389e-25
Identity = 66/181 (36.46%), Postives = 101/181 (55.80%), Query Frame = 1
Query:  211 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKI---EPEFVLFFDCSEEEMERRILNR------NQGREDDNVETIRKRFKVFLESSLPVVQYYETKGKVRKIDAAKPVAEVFDAVKA 723
            GGPGSGKGTQ A +    G  H+S GD+LRAE  +G+  G   Q+ +  G++VP +V + ++   +++      +L+DGFPRN    A FE + K    + +++LF D     ++ R LNR       Q R DD  ETI KR +V+   +LP++Q Y +  K   ID  + + EV  A++A
Sbjct:    7 GGPGSGKGTQAAILTTLLGIPHISTGDILRAERAAGTLLGQQAQSYMDRGELVPDQVIVDMVANRLQQPDTAAGWLLDGFPRNGAQAAVFEEMLKSIHQDYDYLLFLDVPAAILQERALNRAKQAVNGQQRSDDTPETILKRLQVYERETLPMIQQYMSHPKFVPIDGTRTIEEVTAAIQA 187          
The following BLAST results are available for this feature:
BLAST of FC925307 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_NAUPA1.267e-2638.80Adenylate kinase OS=Nautilia profundicola (strain ... [more]
KAD_XANCP3.685e-2636.93Adenylate kinase OS=Xanthomonas campestris pv. cam... [more]
KAD_XANC83.685e-2636.93Adenylate kinase OS=Xanthomonas campestris pv. cam... [more]
KAD_XANCB6.286e-2636.93Adenylate kinase OS=Xanthomonas campestris pv. cam... [more]
KAD_XANC51.072e-2536.93Adenylate kinase OS=Xanthomonas campestris pv. ves... [more]
KAD_XANAC1.072e-2536.93Adenylate kinase OS=Xanthomonas axonopodis pv. cit... [more]
KAD_CORU71.072e-2538.15Adenylate kinase OS=Corynebacterium urealyticum (s... [more]
KAD_XANOR1.400e-2536.16Adenylate kinase OS=Xanthomonas oryzae pv. oryzae ... [more]
KAD_XANOM1.400e-2536.16Adenylate kinase OS=Xanthomonas oryzae pv. oryzae ... [more]
KAD_THEEB2.389e-2536.46Adenylate kinase OS=Thermosynechococcus elongatus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YH05FM1 TF Citrus clementina cDNA clone KN0AAP8YH05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925307 ID=FC925307; Name=FC925307; organism=Citrus clementina; type=EST; length=761bp
AAACTAACATTGGCTATTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCAT
ATTCTTCTCTCTCTCTCCAAACAAAACAACGCTCGCAATTCGCTAAGATC
GGTTATTCAGACTGAGTTAGTTGGCGCTGATGGGAACTGTGGTTGAAACT
CCTGTCAAGGAAGCAGATGCTACCGTAACTGTGAAGAAGCCCACTGTTGT
TTTTGTTTTGGGTGGACCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACA
TTGTTGAACACTTTGGATACACCCATCTCAGTGCTGGTGATCTTCTCAGA
GCCGAAATCAAATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGAT
TAAAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAA
AAGCAATGGAGGAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCC
AGAAACGAGGAAAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCC
AGAATTCGTTCTGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCA
TTTTGAATAGGAATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGG
AAGCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTA
TGAAACTAAGGGTAAAGTTCGGAAGATTGATGCTGCAAAGCCTGTTGCAG
AGGTTTTTGATGCTGTTAAAGCTGTTTTTACCCCAAAAGATGAAAAAGCT
GCTGGTTAGGT
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