FC925354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_STAAB (Thioredoxin OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=trxA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.607e-13 Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELA-NILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK-KEELQQTIAKHL 259 VDF A+WCGPC+ IAP L ELA + LK+DVDE S A + V ++PT + K+G+ VDKVVG + KE L + + KHL Sbjct: 22 VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_STAA8 (Thioredoxin OS=Staphylococcus aureus (strain NCTC 8325) GN=trxA PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.607e-13 Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELA-NILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK-KEELQQTIAKHL 259 VDF A+WCGPC+ IAP L ELA + LK+DVDE S A + V ++PT + K+G+ VDKVVG + KE L + + KHL Sbjct: 22 VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_STAA3 (Thioredoxin OS=Staphylococcus aureus (strain USA300) GN=trxA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.607e-13 Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELA-NILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK-KEELQQTIAKHL 259 VDF A+WCGPC+ IAP L ELA + LK+DVDE S A + V ++PT + K+G+ VDKVVG + KE L + + KHL Sbjct: 22 VDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 104
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEEL (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis elegans GN=F56G4.5 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.607e-13 Identity = 34/90 (37.78%), Postives = 53/90 (58.89%), Query Frame = 2 Query: 5 QLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 274 +L +DF A+WCGPCR I+P + + N FLKV+ D + + + + AMPTF+FLK + VD V GA ++ + + I +H + A Sbjct: 23 RLIIIDFFANWCGPCRMISPIFEQFSAEYGNATFLKVNCDVARDIVQRYNISAMPTFIFLKNRQQVDMVRGANQQAIAEKIRQHYSPTPA 112
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_CHLMU (Thioredoxin OS=Chlamydia muridarum GN=trxA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.741e-13 Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 2 Query: 8 LPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK-KEELQQTIAKH 256 L VDF A WCGPC+ + P L LA LP V LK+D+D A + V ++PT + K+GK V++ VG K K+ L + I+KH Sbjct: 18 LVLVDFFAEWCGPCKMLTPVLEALAAELPYVTILKLDIDASPRPAEQFGVSSIPTLILFKDGKEVERSVGLKDKDSLVKLISKH 101
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO1_SYNE7 (Thioredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=trxA PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 2.741e-13 Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELANILPN-VLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA-KKEELQQTIAKHL 259 VDF A WCGPCR +AP + E+A + V +KV+ DE SVA+ + + ++PT M K+G+ VD VVGA K L T+ KHL Sbjct: 25 VDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDENPSVASQYGIRSIPTLMIFKDGQRVDTVVGAVPKTTLANTLDKHL 107
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_PENCH (Thioredoxin OS=Penicillium chrysogenum GN=TRXA PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13 Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQ 238 VDF A+WCGPC+ IAP L +L+ + F KVDVDEL VA V AMPTF F K G+ ++V GA +Q Sbjct: 25 VDFHATWCGPCKAIAPALEKLSETHTGIQFYKVDVDELSEVAASNGVSAMPTFHFYKGGERNEEVKGANPAAIQ 98
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_EMENI (Thioredoxin OS=Emericella nidulans GN=TRX1 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13 Identity = 36/82 (43.90%), Postives = 49/82 (59.76%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLA 262 VD A+WCGPC+ IAP + + A + F ++DVDEL VA + + AMPTF+ K+G+ V VVGA L+ I LA Sbjct: 29 VDCFATWCGPCKAIAPTVEKFAQTYTDASFYQIDVDELSEVAAELGIRAMPTFLLFKDGQKVSDVVGANPGALEAGIKALLA 110
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_CYACA (Thioredoxin OS=Cyanidium caldarium GN=trxA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13 Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 2 Query: 2 KQLPFVDFTASWCGPCRFIAPFLAELAN-ILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA-KKEELQQTIAKHL 259 ++L VDF A WCGPCR I+P + ELA + V +K++ DE S++ ++ + ++PT M K+GK VD V+GA K L + K+L Sbjct: 20 EKLVLVDFWAPWCGPCRMISPVIDELAQEYVEQVKIVKINTDENPSISAEYGIRSIPTLMLFKDGKRVDTVIGAVPKSTLTNALKKYL 107
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_BACSU (Thioredoxin OS=Bacillus subtilis GN=trxA PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13 Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 2 Query: 20 DFTASWCGPCRFIAPFLAELANILPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK-KEELQQTIAKHL 259 DF A WCGPC+ IAP L EL + + L +K+DVDE + A + V ++PT + LK+G++V+ VG K KE LQ+ + KHL Sbjct: 23 DFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHL 104 The following BLAST results are available for this feature:
BLAST of FC925354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925354 ID=FC925354; Name=FC925354; organism=Citrus clementina; type=EST; length=308bpback to top |