FC925383

Overview
NameFC925383
Unique NameFC925383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length644
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: ERDL1_ARATH (Sugar transporter ERD6-like 1 OS=Arabidopsis thaliana GN=SUGTL4 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.138e-48
Identity = 92/178 (51.69%), Postives = 129/178 (72.47%), Query Frame = 1
Query:  109 NSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLF 642
            +SS T  ++LST VA+ GSF +GC++ YSSPA+S +  +LGLSV  YS F SV+T GG+I +  +GKIA V GRR  MW++++FCI GWLA+AF+ D   L +GR  LG G+ +I+YV+PVY+AEITPK  RG F+ +NQ L   G+S+M+  G    WR LAL++A+PC +Q++ LF
Sbjct:   20 SSSITCGLLLSTSVAVTGSFVYGCAMSYSSPAQSKIMEELGLSVADYSFFTSVMTLGGMITAAFSGKIAAVIGRRQTMWIADVFCIFGWLAVAFAHDKMLLNIGRGFLGFGVGLISYVVPVYIAEITPKAFRGGFSFSNQLLQSFGISLMFFTGNFFHWRTLALLSAIPCGIQMICLF 197          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: ERDL9_ARATH (Sugar transporter ERD6-like 9 OS=Arabidopsis thaliana GN=At3g05155 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.323e-48
Identity = 86/179 (48.04%), Postives = 133/179 (74.30%), Query Frame = 1
Query:  106 DNSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLF 642
            ++++ TP +V +T + +  SF+ G ++G+++   + +  DL LS+TQ+SVFGS+LTFGG+IG+L +  IAD  G +  +W++E+FCI GWLAIA +K++  L LGRF +GIG+ +++YV+PVY+AEITPK +RG FT +NQ L   G++  Y +G  +SWR +ALI  +PCL+Q+VGLF
Sbjct:   19 ESANTTPFLVFTTFIIVSASFSFGVALGHTAGTMASIMEDLDLSITQFSVFGSLLTFGGMIGALFSATIADSFGCKMTLWITEVFCISGWLAIALAKNIIWLDLGRFFVGIGVGLLSYVVPVYIAEITPKTVRGTFTFSNQLLQNCGVATAYYLGNFMSWRIIALIGILPCLIQLVGLF 197          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: ERDL2_ARATH (Sugar transporter ERD6-like 2 OS=Arabidopsis thaliana GN=SUGTL3 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.643e-47
Identity = 89/177 (50.28%), Postives = 125/177 (70.62%), Query Frame = 1
Query:  112 SSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLF 642
            SS T  ++LST V + GSF +GC++ YSSPA+S +  +LGLSV  YS F SV+T GG+I ++ +GKI+ + GRR  MW+S++ CI GWLA+AF+ D+  L  GR  LG G+ +I+YV+PVY+AEITPK  RG F+ +NQ L   G+S+M+  G    WR LAL++A+P   QV+ LF
Sbjct:   19 SSFTSGLLLSTSVVVAGSFCYGCAMSYSSPAQSKIMEELGLSVADYSFFTSVMTLGGMITAVFSGKISALVGRRQTMWISDVCCIFGWLAVAFAHDIIMLNTGRLFLGFGVGLISYVVPVYIAEITPKTFRGGFSYSNQLLQCLGISLMFFTGNFFHWRTLALLSAIPSAFQVICLF 195          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: ERD6_ARATH (Sugar transporter ERD6 OS=Arabidopsis thaliana GN=ERD6 PE=1 SV=3)

HSP 1 Score: 188.348 bits (477), Expect = 2.802e-47
Identity = 100/226 (44.25%), Postives = 141/226 (62.39%), Query Frame = 1
Query:    4 ESLEEGLIAKSSLAQPNPIKITNEVGE-RSGL----------PGSDNSSA--TPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLF 642
            +S+E+GL+ KS   +    K  NE     SGL          P +D+     T  V LST VA+ GSF  GC VG+SS A++G+  DL LSV +YS+FGS+LT GG+IG++ +GK+ADV GR+  M   E FCI GWL +A +++   L  GR  LGIG+ I +YVIPVY+AEI PK++RG+F   NQ +   G+S+ +++G  + WR L ++  VPC+  V  LF
Sbjct:    5 KSMEKGLLRKSLSIRER--KFPNEDAFLESGLSRKSPREVKKPQNDDGECRVTASVFLSTFVAVSGSFCTGCGVGFSSGAQAGITKDLSLSVAEYSMFGSILTLGGLIGAVFSGKVADVLGRKRTMLFCEFFCITGWLCVALAQNAMWLDCGRLLLGIGVGIFSYVIPVYIAEIAPKHVRGSFVFANQLMQNCGISLFFIIGNFIPWRLLTVVGLVPCVFHVFCLF 228          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: EDL15_ARATH (Sugar transporter ERD6-like 15 OS=Arabidopsis thaliana GN=At4g04760 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.218e-42
Identity = 86/210 (40.95%), Postives = 129/210 (61.43%), Query Frame = 1
Query:   13 EEGLIAKSSLAQPNPIKITNEVGERSGLPGSDNSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLF 642
            EEGL+  +S                S L    +++ T   VL+ +V  CG+FA GC +GYS+P ++ +  DL LS+  YS+FGS+LT G I+G+L+ GK+ D+ GR   +W++ +  ++GW AIAF+K VW L LGR   GI + I  Y+ PVY+ EI P+N+RGA ++  Q     G+SV Y +GTIV+WR LA++  +P L+ +  LF
Sbjct:    3 EEGLLLPAS-----------STSSSSSLLSEISNACTRPFVLAFIVGSCGAFAFGCIIGYSAPTQTSIMKDLNLSIADYSLFGSILTVGLILGALICGKLTDLVGRVKTIWITNILFVIGWFAIAFAKGVWLLDLGRLLQGISIGISVYLGPVYITEIAPRNLRGAASSFAQLFAGVGISVFYALGTIVAWRNLAILGCIPSLMVLPLLF 201          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: ERDL8_ARATH (Sugar transporter ERD6-like 8 OS=Arabidopsis thaliana GN=At3g05150 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.078e-42
Identity = 84/192 (43.75%), Postives = 126/192 (65.62%), Query Frame = 1
Query:   70 NEVGERSGLP--GSDNSS-ATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVG 636
            N+  E   LP  GSD S  A+ +V LST++A+CGS+  G  VGYS+P + G+  +L LS +Q+SVFGS+L  G ++G++ +GKI+D  GR+GAM LS +   +GWL I  +K    L  GRF  G G   +++V+PV++AEI+P+ +RGA    NQ  I+ G++ M+L+G +V+WR LAL    PC++   G
Sbjct:   12 NDKSEPLLLPENGSDVSEEASWMVYLSTIIAVCGSYEFGTCVGYSAPTQFGIMEELNLSYSQFSVFGSILNMGAVLGAITSGKISDFIGRKGAMRLSSVISAIGWLIIYLAKGDVPLDFGRFLTGYGCGTLSFVVPVFIAEISPRKLRGALATLNQLFIVIGLASMFLIGAVVNWRTLALTGVAPCVVLFFG 203          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: EDL14_ARATH (Sugar transporter ERD6-like 14 OS=Arabidopsis thaliana GN=At4g04750 PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 3.919e-41
Identity = 80/206 (38.83%), Postives = 134/206 (65.05%), Query Frame = 1
Query:   25 IAKSSLAQPNPIKITNEVGERSGLPGSDNSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLF 642
            +A+ SL   +   ++    + S L    ++++T   VL+  V  CG+ + GC VGY++P +S +  DL LS+  +S FGS+LT G I+G+L+ GK+AD+ GR   +W++ +  ++GWLAIAF+KDV  L LGR   GI + I +Y+ P+Y++E+ P+N+RGA ++  Q  +  G+S  Y +GT V+WR+LA++ ++P L+ +  LF
Sbjct:    1 MAEESLLPSHTEDVSASPNKSSSLLSEISNASTRPFVLAFTVGSCGALSFGCIVGYTAPTQSSIMKDLNLSIADFSFFGSILTVGLILGALICGKLADLVGRVYTIWITNILVLIGWLAIAFAKDVRLLDLGRLLQGISVGISSYLGPIYISELAPRNLRGAASSLMQLFVGVGLSAFYALGTAVAWRSLAILGSIPSLVVLPLLF 206          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.668e-39
Identity = 72/171 (42.11%), Postives = 115/171 (67.25%), Query Frame = 1
Query:  130 VVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLF 642
            V+   L+   G    G + GYSSP ++ +  DLGL+V++YSVFGS+   G ++G++ +G+IA+  GR+G++ ++ +  I+GWL+I+F+KD   LY+GR   G G+ II+Y +PVY+AEI P+ +RGA  + NQ  +  G+ + YL+G  V WR LA++  +PC L + GLF
Sbjct:   49 VLACVLIVALGPIQFGFTCGYSSPTQAAITKDLGLTVSEYSVFGSLSNVGAMVGAIASGQIAEYVGRKGSLMIAAIPNIIGWLSISFAKDTSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQTMRGALGSVNQLSVTIGIMLAYLLGLFVPWRILAVLGVLPCTLLIPGLF 219          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.791e-39
Identity = 72/171 (42.11%), Postives = 114/171 (66.67%), Query Frame = 1
Query:  130 VVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVGLF 642
            V+   L+   G    G + GYSSP ++ +  DLGL+V++YSVFGS+   G ++G++ +G+IA+  GR+G++ ++ +  I+GWL I+F+KD   LY+GR   G G+ II+Y +PVY+AEI P+N+RG   + NQ  +  G+ + YL+G  V WR LA++  +PC L + GLF
Sbjct:   48 VLACVLIVALGPIQFGFTCGYSSPTQAAITKDLGLTVSEYSVFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAIPNIIGWLCISFAKDTSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQNMRGGLGSVNQLSVTIGIMLAYLLGLFVPWRILAVLGILPCTLLIPGLF 218          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR6_HUMAN (Solute carrier family 2, facilitated glucose transporter member 6 OS=Homo sapiens GN=SLC2A6 PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 3.120e-22
Identity = 60/172 (34.88%), Postives = 93/172 (54.07%), Query Frame = 1
Query:  130 VVLSTLVAICGSFAHGCSVGYSSPA----ESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVV 633
            V L+T  A+ G+F+ G ++ Y+SP     E  +  DL L+ +Q S FGSV T G   G L    + D+ GR+ ++  S +    G+  +A +  +W L LGR   G    + A  IPVYV+EI P  +RGA  AT Q + + G   +Y +G ++ WR LA+    P L+ ++
Sbjct:   38 VFLATFAAVLGNFSFGYALVYTSPVIPALERSLDPDLHLTKSQASWFGSVFTLGAAAGGLSAMILNDLLGRKLSIMFSAVPSAAGYALMAGAHGLWMLLLGRTLTGFAGGLTAACIPVYVSEIAPPGVRGALGATPQLMAVFGSLSLYALGLLLPWRWLAVAGEAPVLIMIL 209          
The following BLAST results are available for this feature:
BLAST of FC925383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
ERDL1_ARATH1.138e-4851.69Sugar transporter ERD6-like 1 OS=Arabidopsis thali... [more]
ERDL9_ARATH4.323e-4848.04Sugar transporter ERD6-like 9 OS=Arabidopsis thali... [more]
ERDL2_ARATH1.643e-4750.28Sugar transporter ERD6-like 2 OS=Arabidopsis thali... [more]
ERD6_ARATH2.802e-4744.25Sugar transporter ERD6 OS=Arabidopsis thaliana GN=... [more]
EDL15_ARATH1.218e-4240.95Sugar transporter ERD6-like 15 OS=Arabidopsis thal... [more]
ERDL8_ARATH2.078e-4243.75Sugar transporter ERD6-like 8 OS=Arabidopsis thali... [more]
EDL14_ARATH3.919e-4138.83Sugar transporter ERD6-like 14 OS=Arabidopsis thal... [more]
ERDL4_ARATH3.668e-3942.11Sugar transporter ERD6-like 4 OS=Arabidopsis thali... [more]
ERDL6_ARATH4.791e-3942.11Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]
GTR6_HUMAN3.120e-2234.88Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI14FM1 TF Citrus clementina cDNA clone KN0AAP8YI14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925383 ID=FC925383; Name=FC925383; organism=Citrus clementina; type=EST; length=644bp
CCAGAAAGCTTGGAGGAGGGACTAATAGCAAAGTCTTCACTTGCTCAGCC
AAATCCTATAAAAATTACAAATGAAGTTGGTGAGCGCAGTGGCTTGCCAG
GGAGTGACAATTCTTCAGCTACACCCGTTGTTGTTCTTAGCACCTTGGTA
GCCATATGTGGTTCATTTGCTCATGGCTGTTCTGTTGGATATTCATCACC
TGCTGAGTCTGGAATGAGGGCAGACCTGGGACTCTCAGTGACACAATACT
CAGTTTTTGGTTCAGTATTGACATTTGGAGGAATAATAGGTTCATTAGTA
AATGGGAAAATAGCAGACGTCACTGGTCGAAGAGGTGCAATGTGGCTTTC
TGAGTTATTCTGTATTGTTGGGTGGCTGGCAATAGCATTCTCAAAGGATG
TTTGGTCACTATATCTTGGACGATTTTCTCTTGGGATTGGACTTGCAATT
ATTGCTTATGTGATACCAGTATATGTCGCAGAAATAACACCCAAGAACAT
CCGGGGAGCATTTACAGCTACTAATCAGTTCTTGATTATATCTGGTATGT
CAGTAATGTATTTGGTGGGTACTATTGTTTCCTGGCGAGCCCTGGCTCTA
ATTGCTGCTGTTCCATGTCTGTTGCAAGTTGTTGGTTTGTTCTT
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