FC925383

Overview
NameFC925383
Unique NameFC925383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length644
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR8_RAT (Solute carrier family 2, facilitated glucose transporter member 8 OS=Rattus norvegicus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.078e-22
Identity = 56/172 (32.56%), Postives = 94/172 (54.65%), Query Frame = 1
Query:  130 VVLSTLVAICGSFAHGCSVGYSSPAESGMRAD----LGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVV 633
            V L+T  A  G  + G ++GYSSPA   +R      L L  T  S FG+V+T G   G ++ G + D  GR+ ++ L  +  + G+  I  ++DVW L  GR   G+   + + V PVY++EI    +RG   +  Q ++++G+ + Y+ G ++ WR LA++  VP  L ++
Sbjct:   26 VFLATFAAALGPLSFGFALGYSSPAIPSLRRTAPPALRLGDTAASWFGAVVTLGAAAGGVLGGWLLDRAGRKLSLLLCTVPFVTGFAVITAARDVWMLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVTGILLAYVAGWVLEWRWLAVLGCVPPTLMLL 197          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR8_MOUSE (Solute carrier family 2, facilitated glucose transporter member 8 OS=Mus musculus GN=Slc2a8 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.884e-21
Identity = 54/172 (31.40%), Postives = 94/172 (54.65%), Query Frame = 1
Query:  130 VVLSTLVAICGSFAHGCSVGYSSPAESGMRAD----LGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVV 633
            V L++  A  G  + G ++GYSSPA   +R      L L     S FG+V+T G   G ++ G + D +GR+ ++ L  +  + G+  I  ++DVW L  GR   G+   + + V PVY++EI    +RG   +  Q ++++G+ + Y+ G ++ WR LA++  VP  L ++
Sbjct:   26 VFLASFAAALGPLSFGFALGYSSPAIPSLRRTAPPALRLGDNAASWFGAVVTLGAAAGGILGGWLLDRSGRKLSLLLCTVPFVTGFAVITAARDVWMLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVTGILLAYVAGWVLEWRWLAVLGCVPPTLMLL 197          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR8_HUMAN (Solute carrier family 2, facilitated glucose transporter member 8 OS=Homo sapiens GN=SLC2A8 PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 1.893e-19
Identity = 53/172 (30.81%), Postives = 90/172 (52.33%), Query Frame = 1
Query:  130 VVLSTLVAICGSFAHGCSVGYSSPAESGMRADLG----LSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVV 633
            V L+   A  G  + G ++GYSSPA   ++        L     S FG+V+T G   G ++ G + D  GR+ ++ L  +  + G+  I  ++DVW L  GR   G+   + + V PVY++EI    +RG   +  Q +++ G+ + YL G ++ WR LA++  VP  L ++
Sbjct:   26 VFLAAFAAALGPLSFGFALGYSSPAIPSLQRAAPPAPRLDDAAASWFGAVVTLGAAAGGVLGGWLVDRAGRKLSLLLCSVPFVAGFAVITAAQDVWMLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVVGILLAYLAGWVLEWRWLAVLGCVPPSLMLL 197          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR8_BOVIN (Solute carrier family 2, facilitated glucose transporter member 8 OS=Bos taurus GN=SLC2A8 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.893e-19
Identity = 52/166 (31.33%), Postives = 88/166 (53.01%), Query Frame = 1
Query:  130 VVLSTLVAICGSFAHGCSVGYSSPAESGMRADLG----LSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVP 615
            V L+   A  G  + G ++GYSSPA   +R        L     S FG+++T G   G ++ G + D  GR+ ++ L  L  + G+  I  ++++W L  GR   G+   I + V PVY++EI    +RG   +  Q ++++G+ + YL G ++ WR LA++  VP
Sbjct:   26 VFLAAFAAALGPLSFGFALGYSSPAIPSLRRAAPPAPHLDEDAASWFGAIVTLGAAAGGVLGGWLLDRAGRKLSLVLCALPFVAGFAVITAAQNLWMLLGGRLLTGLACGIASLVAPVYISEIAYPEVRGLLGSCVQLMVVTGILLAYLAGWVLEWRWLAVLGCVP 191          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: YWTG_BACSU (Putative metabolite transport protein ywtG OS=Bacillus subtilis GN=ywtG PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.662e-18
Identity = 53/164 (32.32%), Postives = 89/164 (54.27%), Query Frame = 1
Query:  160 GSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIV----SWRALALIAAVPCLLQVVGL 639
            G   +G   G  S A   M+ +LGL+     +  S L  G I+GS   GK+ D  GR+ A+  + L   +G L +A + +   + L R  LG+ +     ++P+Y++E+ PK+ RGA ++ NQ +I  G+ + Y+V  I     +WR +  +AAVP LL ++G+
Sbjct:   16 GGALYGYDTGVISGAILFMKKELGLNAFTEGLVVSSLLVGAILGSGAAGKLTDRFGRKKAIMAAALLFCIGGLGVALAPNTGVMVLFRIILGLAVGTSTTIVPLYLSELAPKHKRGALSSLNQLMITVGILLSYIVNYIFADAEAWRWMLGLAAVPSLLLLIGI 179          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: ITR2_YEAST (Myo-inositol transporter 2 OS=Saccharomyces cerevisiae GN=ITR2 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 7.953e-18
Identity = 54/181 (29.83%), Postives = 85/181 (46.96%), Query Frame = 1
Query:  109 NSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYS---VFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVS-----WRALALIAAVPCLLQ 627
            N S +P ++  T VA    F  G   GY S A   +  DL   V  Y    +  +  + G +I S+  G  ADV GRR  +  S L  ++G +    +   W +  GR  +G G+ I + + P++++EI PK IRG  T  N   +  G  + Y  G  ++     WR L  ++ +P +LQ
Sbjct:  102 NQSISPFIITLTFVASISGFMFGYDTGYISSALISINRDLDNKVLTYGEKELITAATSLGALITSVGAGTAADVFGRRPCLMFSNLMFLIGAILQITAHKFWQMAAGRLIMGFGVGIGSLISPLFISEIAPKMIRGRLTVINSLWLTGGQLIAYGCGAGLNHVKNGWRILVGLSLIPTVLQ 282          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: ITR1_YEAST (Myo-inositol transporter 1 OS=Saccharomyces cerevisiae GN=ITR1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.314e-17
Identity = 52/181 (28.73%), Postives = 85/181 (46.96%), Query Frame = 1
Query:  109 NSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYS---VFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVS-----WRALALIAAVPCLLQ 627
            N S +P ++  T VA    F  G   GY S A   +  DL   V  Y    +  +  + G +I S+  G  AD+ GR+  +  S L  ++G +    +   W + +GR  +G G+ I + + P++++EI PK IRG  T  N   +  G  V Y  G  ++     WR L  ++ +P  +Q
Sbjct:   79 NQSLSPFIITLTFVASISGFMFGYDTGYISSALISIGTDLDHKVLTYGEKEIVTAATSLGALITSIFAGTAADIFGRKRCLMGSNLMFVIGAILQVSAHTFWQMAVGRLIMGFGVGIGSLIAPLFISEIAPKMIRGRLTVINSLWLTGGQLVAYGCGAGLNYVNNGWRILVGLSLIPTAVQ 259          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: CSBC_BACSU (Probable metabolite transport protein csbC OS=Bacillus subtilis GN=csbC PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.314e-17
Identity = 50/164 (30.49%), Postives = 87/164 (53.05%), Query Frame = 1
Query:  160 GSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIV----SWRALALIAAVPCLLQVVGL 639
            G   +G   G  S A   +  D+ L+     +  S+L  G I GS ++G  +D  GRR  +++  +  I+G LA AFS+ +  L   R  LG+ +     ++PVY++E+ P  IRG     N  +I++G+ + Y+V  +     +WR +  +AAVP +L ++G+
Sbjct:   17 GGLLYGYDTGVISGALLFINNDIPLTTLTEGLVVSMLLLGAIFGSALSGTCSDRWGRRKVVFVLSIIFIIGALACAFSQTIGMLIASRVILGLAVGGSTALVPVYLSEMAPTKIRGTLGTMNNLMIVTGILLAYIVNYLFTPFEAWRWMVGLAAVPAVLLLIGI 180          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR5_HORSE (Solute carrier family 2, facilitated glucose transporter member 5 OS=Equus caballus GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.148e-16
Identity = 63/196 (32.14%), Postives = 102/196 (52.04%), Query Frame = 1
Query:  121 TPVVVLSTLVAICGS-FAHGCSVG-YSSPAE--------------SGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWS---LYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVG------TIVSWRALALIAAVPCLLQVV 633
            TPV+ L+TL+A  GS F +G +V   +SPAE              S   ++  L++  +S+  S+  FGG +GSL+ G + +  GR+G +  + +F IV  + +  SK   S   + L R  +GI   + + V+P+Y+ E++PKN+RGA     Q  I  G+ V  +VG      T   W  L  + A+P  LQ++
Sbjct:   14 TPVLALATLIAAFGSSFQYGYNVAAVNSPAELMKAFYNETHYSRFSEYISEFSLTLL-WSISVSMFPFGGFVGSLMVGPLVNRLGRKGTLLFNNIFSIVPAILMGTSKTARSYEMIILSRLLVGICAGLSSNVVPMYLGELSPKNLRGALGVVPQLFITVGILVAQIVGLRSLLATEEGWPILLGLTAIPAALQLL 208          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: INT4_ARATH (Inositol transporter 4 OS=Arabidopsis thaliana GN=INT4 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.500e-16
Identity = 53/179 (29.61%), Postives = 89/179 (49.72%), Query Frame = 1
Query:  121 TPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRAD---LGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVG-----TIVSWRALALIAAVPCLLQVV 633
            TP ++   L A  G    G   G  S A   ++ D   +       S   S+   G I+G+ V G I D  GRR ++ ++++  ++G + +AF+   W + +GR  +G G+ + +   P+Y++E +P  IRGA  +TN  LI  G    YL+      T  +WR +  +A VP ++Q V
Sbjct:   24 TPYIMRLALSAGIGGLLFGYDTGVISGALLFIKEDFDEVDKKTWLQSTIVSMAVAGAIVGAAVGGWINDKFGRRMSILIADVLFLIGAIVMAFAPAPWVIIVGRIFVGFGVGMASMTSPLYISEASPARIRGALVSTNGLLITGGQFFSYLINLAFVHTPGTWRWMLGVAGVPAIVQFV 202          
The following BLAST results are available for this feature:
BLAST of FC925383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
GTR8_RAT9.078e-2232.56Solute carrier family 2, facilitated glucose trans... [more]
GTR8_MOUSE5.884e-2131.40Solute carrier family 2, facilitated glucose trans... [more]
GTR8_HUMAN1.893e-1930.81Solute carrier family 2, facilitated glucose trans... [more]
GTR8_BOVIN1.893e-1931.33Solute carrier family 2, facilitated glucose trans... [more]
YWTG_BACSU4.662e-1832.32Putative metabolite transport protein ywtG OS=Baci... [more]
ITR2_YEAST7.953e-1829.83Myo-inositol transporter 2 OS=Saccharomyces cerevi... [more]
ITR1_YEAST2.314e-1728.73Myo-inositol transporter 1 OS=Saccharomyces cerevi... [more]
CSBC_BACSU2.314e-1730.49Probable metabolite transport protein csbC OS=Baci... [more]
GTR5_HORSE1.148e-1632.14Solute carrier family 2, facilitated glucose trans... [more]
INT4_ARATH1.500e-1629.61Inositol transporter 4 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI14FM1 TF Citrus clementina cDNA clone KN0AAP8YI14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925383 ID=FC925383; Name=FC925383; organism=Citrus clementina; type=EST; length=644bp
CCAGAAAGCTTGGAGGAGGGACTAATAGCAAAGTCTTCACTTGCTCAGCC
AAATCCTATAAAAATTACAAATGAAGTTGGTGAGCGCAGTGGCTTGCCAG
GGAGTGACAATTCTTCAGCTACACCCGTTGTTGTTCTTAGCACCTTGGTA
GCCATATGTGGTTCATTTGCTCATGGCTGTTCTGTTGGATATTCATCACC
TGCTGAGTCTGGAATGAGGGCAGACCTGGGACTCTCAGTGACACAATACT
CAGTTTTTGGTTCAGTATTGACATTTGGAGGAATAATAGGTTCATTAGTA
AATGGGAAAATAGCAGACGTCACTGGTCGAAGAGGTGCAATGTGGCTTTC
TGAGTTATTCTGTATTGTTGGGTGGCTGGCAATAGCATTCTCAAAGGATG
TTTGGTCACTATATCTTGGACGATTTTCTCTTGGGATTGGACTTGCAATT
ATTGCTTATGTGATACCAGTATATGTCGCAGAAATAACACCCAAGAACAT
CCGGGGAGCATTTACAGCTACTAATCAGTTCTTGATTATATCTGGTATGT
CAGTAATGTATTTGGTGGGTACTATTGTTTCCTGGCGAGCCCTGGCTCTA
ATTGCTGCTGTTCCATGTCTGTTGCAAGTTGTTGGTTTGTTCTT
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