FC925383

Overview
NameFC925383
Unique NameFC925383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length644
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR4_MOUSE (Solute carrier family 2, facilitated glucose transporter member 4 OS=Mus musculus GN=Slc2a4 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.027e-13
Identity = 54/214 (25.23%), Postives = 97/214 (45.33%), Query Frame = 1
Query:   73 EVGERSGLPGSDNSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADL------------------GLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWS---LYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMY------LVGTIVSWRALALIAAVPCLLQVV 633
            ++G   G P     + T  +VL+   A+ GS   G ++G  +  +  +                      G   T +++  ++ + GG+I S + G I+   GR+ AM  + +  ++G   +  +  V S   L LGRF +G    + + ++P+YV EI P ++RGA    NQ  I+ G+ V        ++GT   W  L  +  +P LLQ++
Sbjct:    7 QIGSDDGEPPRQRVTGT--LVLAVFSAVLGSLQFGYNIGVINAPQKVIEQSYNATWLGRQGPGGPDSIPQGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLANNVLAVLGGALMGLANAVASYEILILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGILVAQVLGLESMLGTATLWPLLLALTVLPALLQLI 218          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: INT1_ARATH (Probable inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.647e-13
Identity = 48/173 (27.75%), Postives = 83/173 (47.98%), Query Frame = 1
Query:  142 TLVAICGSFAHGCSVGYSSPAESGMRADLGL----SVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIV-----SWRALALIAAVPCLLQVV 633
            T+ A  G    G   G  S A   ++ D  +    S  Q ++    L  G +IG+   G I D  GR+ A   +++    G + +A + D + L  GR  +G+G+ + +   PVY+AE +P  +RG   +TN  +I  G  + YLV +       +WR +  ++ VP ++Q +
Sbjct:   35 TVTAGIGGLLFGYDTGVISGALLYIKDDFEVVKQSSFLQETIVSMALV-GAMIGAAAGGWINDYYGRKKATLFADVVFAAGAIVMAAAPDPYVLISGRLLVGLGVGVASVTAPVYIAEASPSEVRGGLVSTNVLMITGGQFLSYLVNSAFTQVPGTWRWMLGVSGVPAVIQFI 206          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR4_RAT (Solute carrier family 2, facilitated glucose transporter member 4 OS=Rattus norvegicus GN=Slc2a4 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.647e-13
Identity = 54/214 (25.23%), Postives = 96/214 (44.86%), Query Frame = 1
Query:   73 EVGERSGLPGSDNSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADL------------------GLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWS---LYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMY------LVGTIVSWRALALIAAVPCLLQVV 633
            ++G   G P     + T  +VL+   A+ GS   G ++G  +  +  +                      G   T +++  ++ + GG+I S + G I+   GR+ AM  + +  ++G   +  +    S   L LGRF +G    + + ++P+YV EI P ++RGA    NQ  I+ G+ V        ++GT   W  L  I  +P LLQ++
Sbjct:    7 QIGSEDGEPPQQRVTGT--LVLAVFSAVLGSLQFGYNIGVINAPQKVIEQSYNATWLGRQGPGGPDSIPQGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLANNVLAVLGGALMGLANAAASYEILILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGILVAQVLGLESMLGTATLWPLLLAITVLPALLQLL 218          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR3_CHICK (Solute carrier family 2, facilitated glucose transporter member 3 OS=Gallus gallus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.647e-13
Identity = 55/202 (27.23%), Postives = 93/202 (46.04%), Query Frame = 1
Query:  103 SDNSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQ--------------YSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSK---DVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMY------LVGTIVSWRALALIAAVPCLLQVVGL 639
            +D    T  ++ +  VA  GS   G + G  +  E  ++A    +++Q              +S+  ++ + GG+IGS       +  GRR +M L  +    G   +A SK    V  L +GRF +G+   +    +P+Y++E++P ++RGAF   NQ  I+ G+ V        ++GT   W  L     VP +LQ V L
Sbjct:    2 ADKKKITASLIYAVSVAAIGSLQFGYNTGVINAPEKIIQAFYNRTLSQRSGETISPELLTSLWSLSVAIFSVGGMIGSFSVSLFFNRFGRRNSMLLVNVLAFAGGALMALSKIAKAVEMLIIGRFIIGLFCGLCTGFVPMYISEVSPTSLRGAFGTLNQLGIVVGILVAQIFGLEGIMGTEALWPLLLGFTIVPAVLQCVAL 203          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR7_MOUSE (Solute carrier family 2, facilitated glucose transporter member 7 OS=Mus musculus GN=Slc2a7 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.458e-13
Identity = 56/213 (26.29%), Postives = 99/213 (46.48%), Query Frame = 1
Query:   73 EVGERSGLPGSDNSSATPVVVLSTLVAICGS-FAHGCSVGYSSPAES--------------GMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWS---LYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGM------SVMYLVGTIVSWRALALIAAVPCLLQVVGL 639
            E+G    LP S+ +   P +VL+TL A  GS F +G ++   +                  G   D    +  +S   S+   GG++GSLV G + +  GR+G + ++ +F I   + +  SK   +   + L R  +GI   I    +P+Y+ E+ P+N+RGA     +  +I G+      S+  ++G    W  L  +  VP ++Q++ L
Sbjct:    5 EIGTPLPLPHSE-ARLQPTLVLTTLSAAFGSVFQYGYNIAVINTPHKVFKSFYNDTHFERHGTFMDESTLLLLWSCTVSMFPLGGLLGSLVVGLMVNKWGRKGTLLINNVFAITSAVLMGVSKVARAFELIILSRVLVGICAGIAYSTLPMYLGELAPQNLRGALGTMTEVFVIIGVLLAQIFSLQAILGNATGWPILLALTGVPAVIQLLSL 216          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR3_HUMAN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Homo sapiens GN=SLC2A3 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.458e-13
Identity = 52/196 (26.53%), Postives = 90/196 (45.92%), Query Frame = 1
Query:  121 TPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQ--------------YSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAF---SKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVM------YLVGTIVSWRALALIAAVPCLLQVVGL 639
            TP ++ +  VA  GSF  G + G  +  E  ++  +  ++T               +S+  ++ + GG+IGS   G   +  GRR +M +  L  + G   +     +K V  L LGR  +G+   +    +P+Y+ EI+P  +RGAF   NQ  I+ G+ V       +++G+   W  L     +P +LQ   L
Sbjct:    7 TPALIFAITVATIGSFQFGYNTGVINAPEKIIKEFINKTLTDKGNAPPSEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKVAKSVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLEFILGSEELWPLLLGFTILPAILQSAAL 202          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR12_XENLA (Solute carrier family 2, facilitated glucose transporter member 12 OS=Xenopus laevis GN=slc2a12 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.458e-13
Identity = 44/176 (25.00%), Postives = 87/176 (49.43%), Query Frame = 1
Query:  130 VVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVS-----WRALALIAAVPCLLQVVGLF 642
            ++LS+++A       G  +G  S A   +++ L L+  Q  +  S L  G ++ SLV G + D+ GRR  +  + +  +   L         SL  GR  +G+ +++ A    VY+AE++P++ RG   + N+ +I++G+ + Y+   + +     W+ +  +      LQ V +F
Sbjct:   34 IILSSVIAAISGLLVGYELGIISGALLQLQSLLELTCQQQEIVVSALLIGALVASLVGGCLIDLYGRRTTIIFTSILLVFANLLPVVVVSYGSLIAGRIFIGVSISLSAIATCVYIAELSPQDKRGMLVSLNELMIVAGILLAYICNYLFASVNNGWKYMFGLITPLAALQAVAMF 209          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR4_HUMAN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Homo sapiens GN=SLC2A4 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13
Identity = 54/214 (25.23%), Postives = 97/214 (45.33%), Query Frame = 1
Query:   73 EVGERSGLPGSDNSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADL------------------GLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWS---LYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMY------LVGTIVSWRALALIAAVPCLLQVV 633
            ++G   G P     + T  +VL+   A+ GS   G ++G  +  +  +                      G   T +++  ++ + GG+I S + G I+   GR+ AM ++ +  ++G   +  +    S   L LGRF +G    + + ++P+YV EI P ++RGA    NQ  I+ G+ +        L+GT   W  L  +  +P LLQ+V
Sbjct:    7 QIGSEDGEPPQQRVTGT--LVLAVFSAVLGSLQFGYNIGVINAPQKVIEQSYNETWLGRQGPEGPSSIPPGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLVNNVLAVLGGSLMGLANAAASYEMLILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGILIAQVLGLESLLGTASLWPLLLGLTVLPALLQLV 218          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR3_PONAB (Solute carrier family 2, facilitated glucose transporter member 3 OS=Pongo abelii GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.516e-13
Identity = 52/196 (26.53%), Postives = 90/196 (45.92%), Query Frame = 1
Query:  121 TPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQ--------------YSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAF---SKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVM------YLVGTIVSWRALALIAAVPCLLQVVGL 639
            TP ++ +  VA  GSF  G + G  +  E  ++  +  ++T               +S+  ++ + GG+IGS   G   +  GRR +M +  L  + G   +     +K V  L LGR  +G+   +    +P+Y+ EI+P  +RGAF   NQ  I+ G+ V       +++G+   W  L     +P +LQ   L
Sbjct:    7 TPALIFAITVATIGSFQFGYNTGVINAPEKIIKEFINKTLTDKGNAPPSEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKVAKSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLEFILGSEELWPLLLGFTILPTILQSAAL 202          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: PLT6_ARATH (Probable polyol transporter 6 OS=Arabidopsis thaliana GN=PLT6 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 5.898e-13
Identity = 51/188 (27.13%), Postives = 87/188 (46.28%), Query Frame = 1
Query:   97 PGSDNSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTI-------VSWRALALIAAVPCLLQVVGL 639
            P   N  A    +++++V+I      G   G  S A   +  DL  +  Q  V   +L    ++GSL+ G+ +D+ GRR  + L+ +  ++G + + +  +   L  GR + G+G+     V PVY AEI   + RG   +     I  G+ + Y+V          + WR +  IAAVP L+   G+
Sbjct:   10 PAGVNRFALQCAIVASIVSII----FGYDTGVMSGAMVFIEEDLKTNDVQIEVLTGILNLCALVGSLLAGRTSDIIGRRYTIVLASILFMLGSILMGWGPNYPVLLSGRCTAGLGVGFALMVAPVYSAEIATASHRGLLASLPHLCISIGILLGYIVNYFFSKLPMHIGWRLMLGIAAVPSLVLAFGI 193          
The following BLAST results are available for this feature:
BLAST of FC925383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
GTR4_MOUSE2.027e-1325.23Solute carrier family 2, facilitated glucose trans... [more]
INT1_ARATH2.647e-1327.75Probable inositol transporter 1 OS=Arabidopsis tha... [more]
GTR4_RAT2.647e-1325.23Solute carrier family 2, facilitated glucose trans... [more]
GTR3_CHICK2.647e-1327.23Solute carrier family 2, facilitated glucose trans... [more]
GTR7_MOUSE3.458e-1326.29Solute carrier family 2, facilitated glucose trans... [more]
GTR3_HUMAN3.458e-1326.53Solute carrier family 2, facilitated glucose trans... [more]
GTR12_XENLA3.458e-1325.00Solute carrier family 2, facilitated glucose trans... [more]
GTR4_HUMAN4.516e-1325.23Solute carrier family 2, facilitated glucose trans... [more]
GTR3_PONAB4.516e-1326.53Solute carrier family 2, facilitated glucose trans... [more]
PLT6_ARATH5.898e-1327.13Probable polyol transporter 6 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI14FM1 TF Citrus clementina cDNA clone KN0AAP8YI14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925383 ID=FC925383; Name=FC925383; organism=Citrus clementina; type=EST; length=644bp
CCAGAAAGCTTGGAGGAGGGACTAATAGCAAAGTCTTCACTTGCTCAGCC
AAATCCTATAAAAATTACAAATGAAGTTGGTGAGCGCAGTGGCTTGCCAG
GGAGTGACAATTCTTCAGCTACACCCGTTGTTGTTCTTAGCACCTTGGTA
GCCATATGTGGTTCATTTGCTCATGGCTGTTCTGTTGGATATTCATCACC
TGCTGAGTCTGGAATGAGGGCAGACCTGGGACTCTCAGTGACACAATACT
CAGTTTTTGGTTCAGTATTGACATTTGGAGGAATAATAGGTTCATTAGTA
AATGGGAAAATAGCAGACGTCACTGGTCGAAGAGGTGCAATGTGGCTTTC
TGAGTTATTCTGTATTGTTGGGTGGCTGGCAATAGCATTCTCAAAGGATG
TTTGGTCACTATATCTTGGACGATTTTCTCTTGGGATTGGACTTGCAATT
ATTGCTTATGTGATACCAGTATATGTCGCAGAAATAACACCCAAGAACAT
CCGGGGAGCATTTACAGCTACTAATCAGTTCTTGATTATATCTGGTATGT
CAGTAATGTATTTGGTGGGTACTATTGTTTCCTGGCGAGCCCTGGCTCTA
ATTGCTGCTGTTCCATGTCTGTTGCAAGTTGTTGGTTTGTTCTT
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