FC925383

Overview
NameFC925383
Unique NameFC925383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length644
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.241e-12
Identity = 50/176 (28.41%), Postives = 80/176 (45.45%), Query Frame = 1
Query:  109 NSSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYL-------VGTIVSWRALALIAAVP 615
            NS     V+     A   +   G  VG  S A   ++ DL ++  Q  V    L+   + GSL  G+ +D  GR+  M L+ L    G   +A +     L +GR   GIG+ +   + PVY+AEI+P   RG FT+  +  I  G+ + Y+       +   +SWR +  +  +P
Sbjct:   48 NSRTRKYVMACAFFASLNNVLLGYDVGVMSGAVLFIQQDLKITEVQTEVLIGSLSIISLFGSLAGGRTSDSIGRKWTMALAALVFQTGAAVMAVAPSFEVLMIGRTLAGIGIGLGVMIAPVYIAEISPTVARGFFTSFPEIFINLGILLGYVSNYAFSGLSVHISWRIMLAVGILP 223          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR10_MOUSE (Solute carrier family 2, facilitated glucose transporter member 10 OS=Mus musculus GN=Slc2a10 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.241e-12
Identity = 50/177 (28.25%), Postives = 82/177 (46.33%), Query Frame = 1
Query:  127 VVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMY-----LVGTIVSWRALALIAAVPCLLQVVGLF 642
            V++L   V++ G    G  +   S A   ++ + GLS  +  +    L  G ++ SLV G + D  GRR A+  S    + G L +  +  +  L LGR S+G  +++ +    +YV+E+     RG   +  +  I  G+   Y     L G+   WR +   AA P LLQ + LF
Sbjct:    7 VLLLCASVSLLGGLTFGYELAVISGALLPLQLNFGLSCLEQELLVGSLLLGALLASLVGGFLIDCYGRRRAILGSNAVLLAGSLILGLASSLPWLLLGRLSVGFAISLSSMACCIYVSELVGPRQRGVLVSLYEVGITVGILFSYGLNYVLAGSPWGWRHMFGWAAAPALLQSLSLF 183          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: STP10_ARATH (Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12
Identity = 60/215 (27.91%), Postives = 90/215 (41.86%), Query Frame = 1
Query:   76 VGERSGLPGSDNSSATPVVVLSTLVAICGSFAHGCSVGYSS--------------PAESGMR------ADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVS------WRALALIAAVPCLLQVVGLF 642
            V E  G   S     T  V+++ +VA  G    G  +G S                 ES M+      A          +F S L    ++ S +   I    GR+ +M++  L  ++G L  AF+ +V  L +GR  LG+G+       PVY++E+ P  IRGA     Q  I  G+ V  L+    S      WR    +AAVP ++ V+G F
Sbjct:    7 VSEGGGGGRSYEGGVTAFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLTKFFPQVESQMKKAKHDTAYCKFDNQMLQLFTSSLYLAALVASFMASVITRKHGRKVSMFIGGLAFLIGALFNAFAVNVSMLIIGRLLLGVGVGFANQSTPVYLSEMAPAKIRGALNIGFQMAITIGILVANLINYGTSKMAQHGWRVSLGLAAVPAVVMVIGSF 221          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR3_SHEEP (Solute carrier family 2, facilitated glucose transporter member 3 OS=Ovis aries GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12
Identity = 52/199 (26.13%), Postives = 90/199 (45.23%), Query Frame = 1
Query:  112 SSATPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQ--------------YSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSK---DVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSV------MYLVGTIVSWRALALIAAVPCLLQVVGL 639
            +  T  ++ +  +A  GSF  G + G  +  E+ ++  L  ++ +              +S+  ++ + GG+IGS   G   +  GRR +M +  L  I G   + F K    V  L LGR  +G+   +    +P+Y+ EI+P  +RGAF   NQ  I+ G+ V        ++GT   W  L     +P ++Q   L
Sbjct:    4 TKVTTPLIFAISIATIGSFQFGYNTGVINAPEAIIKDFLNYTLEERSETPPSSVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAIAGGCLMGFCKIAESVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQIFGLKVILGTEDLWPLLLGFTILPAIIQCAAL 202          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR3_CANFA (Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12
Identity = 52/196 (26.53%), Postives = 89/196 (45.41%), Query Frame = 1
Query:  121 TPVVVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQ--------------YSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSK---DVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSV------MYLVGTIVSWRALALIAAVPCLLQVVGL 639
            T  ++ +  +A  GSF  G + G  +  E+ ++  L  ++ +              +S+  ++ + GG+IGS   G   +  GRR +M +  L  + G   + F K    V  L LGR  +G+   +    +P+Y+ EI+P  +RGAF   NQ  I+ G+ V        ++GT   W  L     +P +LQ   L
Sbjct:    7 TVSLIFALSIATIGSFQFGYNTGVINAPETIIKDFLNYTLEEKSENLPTEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMVNLLAVAGGCLMGFCKIAQSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQIFGLKVIMGTEELWPLLLGFTIIPAVLQSAAL 202          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR2_BOVIN (Solute carrier family 2, facilitated glucose transporter member 2 OS=Bos taurus GN=SLC2A2 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12
Identity = 52/166 (31.33%), Postives = 83/166 (50.00%), Query Frame = 1
Query:  181 SVGYSSP---AESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYL---GRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVM------YLVGTIVSWRALALIAAVPCLLQVVGLF 642
            S+G  +P   AE        L    +S+  S    GG+I S   G + D  GR  A+ ++ +  +VG L + FSK   S  L   GR   G+   +I+ +IP+Y+ EI P  +RGA  A +Q  I++G+ +       +++G    W  L  ++AVP +LQ + LF
Sbjct:   70 SLGDPTPVSWAEEETMTSASLITMFWSLSVSSFAVGGMIASFFGGLLGDKLGRIKALLVANILSLVGALLMGFSKLGPSHILIISGRGISGLYCGLISGLIPMYIGEIAPTTLRGAIGALHQLAIVTGILISQIVGLDFILGNHELWHILLGLSAVPAILQCLLLF 235          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GALP_ECOLI (Galactose-proton symporter OS=Escherichia coli (strain K12) GN=galP PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12
Identity = 42/140 (30.00%), Postives = 77/140 (55.00%), Query Frame = 1
Query:  235 SVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVS----WRALALIAAVPCLLQVVGLF 642
            S TQ  V  S++ FG  +G++ +G ++   GR+ ++ +  +  + G L  A + +V  L L R  LG+ + + +Y  P+Y++EI P+ IRG+  +  Q +I  G+   YL  T  S    WR +  +  +P +L ++G+F
Sbjct:   51 SHTQEWVVSSMM-FGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYTGAWRWMLGVIIIPAILLLIGVF 189          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GALP_ECOL6 (Galactose-proton symporter OS=Escherichia coli O6 GN=galP PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12
Identity = 42/140 (30.00%), Postives = 77/140 (55.00%), Query Frame = 1
Query:  235 SVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVS----WRALALIAAVPCLLQVVGLF 642
            S TQ  V  S++ FG  +G++ +G ++   GR+ ++ +  +  + G L  A + +V  L L R  LG+ + + +Y  P+Y++EI P+ IRG+  +  Q +I  G+   YL  T  S    WR +  +  +P +L ++G+F
Sbjct:   51 SHTQEWVVSSMM-FGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAAPNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLSDTAFSYTGAWRWMLGVIIIPAILLLIGVF 189          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR5_RABIT (Solute carrier family 2, facilitated glucose transporter member 5 OS=Oryctolagus cuniculus GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.993e-12
Identity = 61/204 (29.90%), Postives = 95/204 (46.57%), Query Frame = 1
Query:   82 ERSGLPGSDNSSATPVVVLSTLVAICGS---FAHGCSVGYSSPAE-------------SGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWS---LYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVSWRALALIAAVPCLLQVVG 636
            E+ G         T V+ L TL+A  GS   +A+  SV  +SP+E             +G   D       +SV  S+   GG  GSL+ G + +  GR+GA+  + +F IV  + +  SK   S   + + R  +GI   + + V+P+Y+ E+ PKN+RGA    +Q  I  G+    LV  I   R++      P LL + G
Sbjct:    2 EQEGQEKKKEGRLTLVLALRTLIAAFGSSFQYAYNVSV-CNSPSELMTEFYNDTYYDRTGELIDEFPLTLLWSVTVSMFPSGGFAGSLLVGPLVNKFGRKGALLFNNIFSIVPAILMGCSKVARSFELIIISRLLVGICAGVSSNVVPMYLGELAPKNLRGALGVESQLFITLGI----LVAQIFGLRSIRQQKGWPILLGLTG 200          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: MSSP1_ARATH (Monosaccharide-sensing protein 1 OS=Arabidopsis thaliana GN=MSSP1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11
Identity = 50/169 (29.59%), Postives = 79/169 (46.75%), Query Frame = 1
Query:  136 LSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMY-LVGTI-----VSWRALALIAAVPCLL 624
            L  L A  G+F  G      + A   +  DL L  +   +  ++   G  + +  +G I+D  GRR  + LS +   V  L + +S +V+ L   R   G G  +   ++PVY++E  P  IRG      QFL   GM + Y +V T+      SWRA+  + ++P LL
Sbjct:    6 LVALAATIGNFLQGWDNATIAGAMVYINKDLNLPTSVQGLVVAMSLIGATVITTCSGPISDWLGRRPMLILSSVMYFVCGLIMLWSPNVYVLCFARLLNGFGAGLAVTLVPVYISETAPPEIRGQLNTLPQFLGSGGMFLSYCMVFTMSLSDSPSWRAMLGVLSIPSLL 174          
The following BLAST results are available for this feature:
BLAST of FC925383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
PLT4_ARATH2.241e-1228.41Probable polyol transporter 4 OS=Arabidopsis thali... [more]
GTR10_MOUSE2.241e-1228.25Solute carrier family 2, facilitated glucose trans... [more]
STP10_ARATH2.927e-1227.91Sugar transport protein 10 OS=Arabidopsis thaliana... [more]
GTR3_SHEEP2.927e-1226.13Solute carrier family 2, facilitated glucose trans... [more]
GTR3_CANFA2.927e-1226.53Solute carrier family 2, facilitated glucose trans... [more]
GTR2_BOVIN2.927e-1231.33Solute carrier family 2, facilitated glucose trans... [more]
GALP_ECOLI2.927e-1230.00Galactose-proton symporter OS=Escherichia coli (st... [more]
GALP_ECOL62.927e-1230.00Galactose-proton symporter OS=Escherichia coli O6 ... [more]
GTR5_RABIT4.993e-1229.90Solute carrier family 2, facilitated glucose trans... [more]
MSSP1_ARATH1.112e-1129.59Monosaccharide-sensing protein 1 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI14FM1 TF Citrus clementina cDNA clone KN0AAP8YI14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925383 ID=FC925383; Name=FC925383; organism=Citrus clementina; type=EST; length=644bp
CCAGAAAGCTTGGAGGAGGGACTAATAGCAAAGTCTTCACTTGCTCAGCC
AAATCCTATAAAAATTACAAATGAAGTTGGTGAGCGCAGTGGCTTGCCAG
GGAGTGACAATTCTTCAGCTACACCCGTTGTTGTTCTTAGCACCTTGGTA
GCCATATGTGGTTCATTTGCTCATGGCTGTTCTGTTGGATATTCATCACC
TGCTGAGTCTGGAATGAGGGCAGACCTGGGACTCTCAGTGACACAATACT
CAGTTTTTGGTTCAGTATTGACATTTGGAGGAATAATAGGTTCATTAGTA
AATGGGAAAATAGCAGACGTCACTGGTCGAAGAGGTGCAATGTGGCTTTC
TGAGTTATTCTGTATTGTTGGGTGGCTGGCAATAGCATTCTCAAAGGATG
TTTGGTCACTATATCTTGGACGATTTTCTCTTGGGATTGGACTTGCAATT
ATTGCTTATGTGATACCAGTATATGTCGCAGAAATAACACCCAAGAACAT
CCGGGGAGCATTTACAGCTACTAATCAGTTCTTGATTATATCTGGTATGT
CAGTAATGTATTTGGTGGGTACTATTGTTTCCTGGCGAGCCCTGGCTCTA
ATTGCTGCTGTTCCATGTCTGTTGCAAGTTGTTGGTTTGTTCTT
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