FC925383

Overview
NameFC925383
Unique NameFC925383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length644
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR12_MACFA (Solute carrier family 2, facilitated glucose transporter member 12 OS=Macaca fascicularis GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.478e-11
Identity = 42/143 (29.37%), Postives = 72/143 (50.35%), Query Frame = 1
Query:  136 LSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYL 564
            LS++ A       G  +G  S A   ++  L LS  +  +  S L  G ++ SL  G + D  GRR A+ LS     +G L +  S     L +GR ++G+ +++ +    VY+AEI P++ RG   + N+ +I+ G+   Y+
Sbjct:   46 LSSVTAAVSGLLVGYELGIISGALLQIKTLLTLSCHEQEMVVSSLLIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYI 188          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: STP4_ARATH (Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11
Identity = 40/136 (29.41%), Postives = 68/136 (50.00%), Query Frame = 1
Query:  250 SVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTI-------VSWRALALIAAVPCLLQVVG 636
            ++F S L    ++ SL    I  V GR+ +M+L      +G     F++++  L +GR  LG G+      +PVY++E+ P N+RGAF    Q  II G+ V  ++          + WR    +A VP ++ ++G
Sbjct:   82 TLFTSSLYVAALVSSLFASTITRVFGRKWSMFLGGFTFFIGSAFNGFAQNIAMLLIGRILLGFGVGFANQSVPVYLSEMAPPNLRGAFNNGFQVAIIFGIVVATIINYFTAQMKGNIGWRISLGLACVPAVMIMIG 217          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR12_MOUSE (Solute carrier family 2, facilitated glucose transporter member 12 OS=Mus musculus GN=Slc2a12 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11
Identity = 41/143 (28.67%), Postives = 72/143 (50.35%), Query Frame = 1
Query:  136 LSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYL 564
            L+++ A       G  +G  S A   +R  L L+  +  +  S L  G  + SL  G + D  GRR A+ LS     +G L +  S     L +GR ++G+ +++ +    VY+AEI P++ RG   + N+ +I++G+   Y+
Sbjct:   46 LTSVTAAISGLLVGYELGLISGALLQIRTLLALTCHEQEMVVSSLLIGAFLASLTGGVLIDRYGRRLAIILSSCLLGLGSLVLIMSLSYTLLIMGRVAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVTGILFAYI 188          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR10_XENLA (Solute carrier family 2, facilitated glucose transporter member 10 OS=Xenopus laevis GN=slc2a10 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11
Identity = 42/173 (24.28%), Postives = 82/173 (47.40%), Query Frame = 1
Query:  130 VVLSTLVAICGSFAHGCSVGYSSPAESGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVS-----WRALALIAAVPCLLQVV 633
            +VL+   ++ G    G  +G  S A   ++    L+  +     S + FG ++ SL+ G I D +GRR ++  S L  + G + +  +   W L +GR ++G  ++I +    +YV+EI   + RG   +  +  I  G+ + Y +   +S     W+ +  +A +P   Q +
Sbjct:    8 LVLAATSSLLGGLIFGYELGIISGALLMLKTVFQLTCFEQEALVSAVLFGALLASLIGGFIIDRSGRRTSIMGSNLVVLAGSIILIATSSFWWLVVGRVTVGFAISISSMACCIYVSEIVRPHQRGTLVSLYETGITVGILISYAMNYFLSAVNDGWKYMFGLAIIPAAFQFI 180          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: STP2_ARATH (Sugar transport protein 2 OS=Arabidopsis thaliana GN=STP2 PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 5.520e-11
Identity = 42/135 (31.11%), Postives = 69/135 (51.11%), Query Frame = 1
Query:  253 VFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGM----SVMYLVGTIVS-WRALALIAAVPCLLQVVGLF 642
            +F S L   GI  S ++  ++   GR+  + L+ +F +VG +    ++++  L  GR  LG G+      +P++++EI P   RG      QFLI  G+     V YL  T+ + WR     AAVP L+ ++G F
Sbjct:   83 LFTSSLYLAGIFASFISSYVSRAFGRKPTIMLASIFFLVGAILNLSAQELGMLIGGRILLGFGIGFGNQTVPLFISEIAPARYRGGLNVMFQFLITIGILAASYVNYLTSTLKNGWRYSLGGAAVPALILLIGSF 217          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR1_RABIT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Oryctolagus cuniculus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.520e-11
Identity = 44/142 (30.99%), Postives = 71/142 (50.00%), Query Frame = 1
Query:  241 TQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWS---LYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMY------LVGTIVSWRALALIAAVPCLLQVVGL 639
            T +S+  ++ + GG+IGS   G   +  GRR +M +  L   V  + + FSK   S   L LGRF +G+   +    +P+YV E++P  +RGA    +Q  I+ G+ +        ++G    W  L  +  VP LLQ + L
Sbjct:   63 TLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLAKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNEDLWPLLLSVIFVPALLQCIVL 204          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR1_BOVIN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Bos taurus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.209e-11
Identity = 41/140 (29.29%), Postives = 69/140 (49.29%), Query Frame = 1
Query:  241 TQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSK---DVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMY------LVGTIVSWRALALIAAVPCLLQVV 633
            T +S+  ++ + GG+IGS   G   +  GRR +M +  L   V  + + FSK       L LGRF +G+   +    +P+YV E++P  +RGA    +Q  I+ G+ +        ++G    W  L  +  +P LLQ +
Sbjct:   63 TLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTELRGALGTLHQLGIVVGILIAQVFGLDSIMGNQELWPLLLSVIFIPALLQCI 202          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: STP1_ARATH (Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11
Identity = 54/199 (27.14%), Postives = 79/199 (39.70%), Query Frame = 1
Query:  121 TPVVVLSTLVAICGSFAHGCSVGYSSPAESG------------MRADLGLSVTQY--------SVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVGTIVS-------WRALALIAAVPCLLQVVG 636
            TP V+ + +VA  G    G  +G S    S              +     S  QY        ++F S L    +I SLV   +    GRR +M    +    G L   F+K VW L +GR  LG G+      +P+Y++E+ P   RGA     Q  I  G+ V  ++    +       WR     A VP L+  +G
Sbjct:   20 TPFVLFTCVVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQEDASTNQYCQYDSPTLTMFTSSLYLAALISSLVASTVTRKFGRRLSMLFGGILFCAGALINGFAKHVWMLIVGRILLGFGIGFANQAVPLYLSEMAPYKYRGALNIGFQLSITIGILVAEVLNYFFAKIKGGWGWRLSLGGAVVPALIITIG 218          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR5_MOUSE (Solute carrier family 2, facilitated glucose transporter member 5 OS=Mus musculus GN=Slc2a5 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11
Identity = 56/200 (28.00%), Postives = 93/200 (46.50%), Query Frame = 1
Query:  106 DNSSATPVVVLSTLVAICGS-FAHGCSVG-YSSPAE-------------SGMRADLGLSVTQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSKDVWS---LYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMYLVG------TIVSWRALALIAAVPCLLQVV 633
            +    T V+ L+TL+A  GS F +G +V   +SP+E             +    +       +S+  S+  FGG I SLV G + +  G++ A+  + +F I+  + +  S+   S   + + R  +GI   I + V+P+Y+ E+ PKN+RGA     Q  I  G+ V  L G          W  L  +  VP  LQ++
Sbjct:    8 ETGELTLVLALATLIAAFGSSFQYGYNVAAVNSPSEFMQQFYNDTYYDRNEENIESFTLTLLWSLTVSMFPFGGFISSLVVGNLVNKLGKKRALLFNNIFSILPAIFMGCSQIAQSFELIIISRLLVGICAGISSNVVPMYLGELAPKNLRGALGVVPQLFITVGILVAQLFGLRSLLANEDGWPVLLGLTGVPAGLQLL 207          
BLAST of FC925383 vs. ExPASy Swiss-Prot
Match: GTR1_RAT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus GN=Slc2a1 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11
Identity = 41/140 (29.29%), Postives = 69/140 (49.29%), Query Frame = 1
Query:  241 TQYSVFGSVLTFGGIIGSLVNGKIADVTGRRGAMWLSELFCIVGWLAIAFSK---DVWSLYLGRFSLGIGLAIIAYVIPVYVAEITPKNIRGAFTATNQFLIISGMSVMY------LVGTIVSWRALALIAAVPCLLQVV 633
            T +S+  ++ + GG+IGS   G   +  GRR +M +  L   V  + + FSK       L LGRF +G+   +    +P+YV E++P  +RGA    +Q  I+ G+ +        ++G    W  L  +  +P LLQ +
Sbjct:   63 TLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNADLWPLLLSVIFIPALLQCI 202          
The following BLAST results are available for this feature:
BLAST of FC925383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
GTR12_MACFA2.478e-1129.37Solute carrier family 2, facilitated glucose trans... [more]
STP4_ARATH3.236e-1129.41Sugar transport protein 4 OS=Arabidopsis thaliana ... [more]
GTR12_MOUSE3.236e-1128.67Solute carrier family 2, facilitated glucose trans... [more]
GTR10_XENLA3.236e-1124.28Solute carrier family 2, facilitated glucose trans... [more]
STP2_ARATH5.520e-1131.11Sugar transport protein 2 OS=Arabidopsis thaliana ... [more]
GTR1_RABIT5.520e-1130.99Solute carrier family 2, facilitated glucose trans... [more]
GTR1_BOVIN7.209e-1129.29Solute carrier family 2, facilitated glucose trans... [more]
STP1_ARATH9.416e-1127.14Sugar transport protein 1 OS=Arabidopsis thaliana ... [more]
GTR5_MOUSE9.416e-1128.00Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RAT9.416e-1129.29Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI14FM1 TF Citrus clementina cDNA clone KN0AAP8YI14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925383 ID=FC925383; Name=FC925383; organism=Citrus clementina; type=EST; length=644bp
CCAGAAAGCTTGGAGGAGGGACTAATAGCAAAGTCTTCACTTGCTCAGCC
AAATCCTATAAAAATTACAAATGAAGTTGGTGAGCGCAGTGGCTTGCCAG
GGAGTGACAATTCTTCAGCTACACCCGTTGTTGTTCTTAGCACCTTGGTA
GCCATATGTGGTTCATTTGCTCATGGCTGTTCTGTTGGATATTCATCACC
TGCTGAGTCTGGAATGAGGGCAGACCTGGGACTCTCAGTGACACAATACT
CAGTTTTTGGTTCAGTATTGACATTTGGAGGAATAATAGGTTCATTAGTA
AATGGGAAAATAGCAGACGTCACTGGTCGAAGAGGTGCAATGTGGCTTTC
TGAGTTATTCTGTATTGTTGGGTGGCTGGCAATAGCATTCTCAAAGGATG
TTTGGTCACTATATCTTGGACGATTTTCTCTTGGGATTGGACTTGCAATT
ATTGCTTATGTGATACCAGTATATGTCGCAGAAATAACACCCAAGAACAT
CCGGGGAGCATTTACAGCTACTAATCAGTTCTTGATTATATCTGGTATGT
CAGTAATGTATTTGGTGGGTACTATTGTTTCCTGGCGAGCCCTGGCTCTA
ATTGCTGCTGTTCCATGTCTGTTGCAAGTTGTTGGTTTGTTCTT
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