FC925386

Overview
NameFC925386
Unique NameFC925386
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925386 vs. ExPASy Swiss-Prot
Match: ADT1_MOUSE (ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 PE=1 SV=4)

HSP 1 Score: 147.517 bits (371), Expect = 6.529e-35
Identity = 81/139 (58.27%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  263 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLAND 676
            SFL DFL GG++AAVSKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGN             FVY LD+ARTRLA D
Sbjct:    7 SFLKDFLAGGIAAAVSKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD 144          
BLAST of FC925386 vs. ExPASy Swiss-Prot
Match: ADT1_BOVIN (ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=1 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 6.529e-35
Identity = 81/139 (58.27%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  263 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLAND 676
            SFL DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G LS WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGN             FVY LD+ARTRLA D
Sbjct:    7 SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD 144          
BLAST of FC925386 vs. ExPASy Swiss-Prot
Match: ADT2_TACAC (ADP/ATP translocase 2 OS=Tachyglossus aculeatus aculeatus GN=SLC25A5 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.528e-35
Identity = 80/139 (57.55%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  263 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLAND 676
            SF  DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+ARTRLA D
Sbjct:    7 SFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIMDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD 144          
BLAST of FC925386 vs. ExPASy Swiss-Prot
Match: ADT3_BOVIN (ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 79/139 (56.83%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  263 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLAND 676
            SF  DFL GG++AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+ARTRLA D
Sbjct:    7 SFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHAS-KQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD 144          
BLAST of FC925386 vs. ExPASy Swiss-Prot
Match: ADT2_RAT (ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 80/139 (57.55%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  263 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLAND 676
            SF  DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+ARTRLA D
Sbjct:    7 SFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD 144          
BLAST of FC925386 vs. ExPASy Swiss-Prot
Match: ADT2_MOUSE (ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 80/139 (57.55%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  263 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLAND 676
            SF  DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+ARTRLA D
Sbjct:    7 SFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD 144          
BLAST of FC925386 vs. ExPASy Swiss-Prot
Match: ADT2_HUMAN (ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 PE=1 SV=6)

HSP 1 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 80/139 (57.55%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  263 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLAND 676
            SF  DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+ARTRLA D
Sbjct:    7 SFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD 144          
BLAST of FC925386 vs. ExPASy Swiss-Prot
Match: ADT2_BOVIN (ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 1.114e-34
Identity = 80/139 (57.55%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  263 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKD-RDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLAND 676
            SF  DFL GGV+AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D R  +W++FAGN             FVY LD+ARTRLA D
Sbjct:    7 SFAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQITADKQYKGIIDCVVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKRTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD 144          
BLAST of FC925386 vs. ExPASy Swiss-Prot
Match: ADT3_PIG (ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 2.481e-34
Identity = 78/139 (56.12%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  263 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLAND 676
            SF  DFL GG++AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D+   +W++FAGN             FVY LD+ARTRLA D
Sbjct:    7 SFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHAS-KQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD 144          
BLAST of FC925386 vs. ExPASy Swiss-Prot
Match: ADT3_HUMAN (ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 PE=1 SV=4)

HSP 1 Score: 145.591 bits (366), Expect = 2.481e-34
Identity = 78/139 (56.12%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  263 SFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSHPYKGISDCFGRTVKDEGILSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLAND 676
            SF  DFL GG++AA+SKTA APIERVKLL+Q Q    K       YKGI DC  R  K++G+LS WRGN ANVIRYFPTQALNFAFKD +K++F    D+   +W++FAGN             FVY LD+ARTRLA D
Sbjct:    7 SFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHAS-KQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD 144          
The following BLAST results are available for this feature:
BLAST of FC925386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
ADT1_MOUSE6.529e-3558.27ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 P... [more]
ADT1_BOVIN6.529e-3558.27ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=... [more]
ADT2_TACAC8.528e-3557.55ADP/ATP translocase 2 OS=Tachyglossus aculeatus ac... [more]
ADT3_BOVIN1.114e-3456.83ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=... [more]
ADT2_RAT1.114e-3457.55ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc2... [more]
ADT2_MOUSE1.114e-3457.55ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 P... [more]
ADT2_HUMAN1.114e-3457.55ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 P... [more]
ADT2_BOVIN1.114e-3457.55ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=... [more]
ADT3_PIG2.481e-3456.12ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=... [more]
ADT3_HUMAN2.481e-3456.12ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP8YI16FM1 TF Citrus clementina cDNA clone KN0AAP8YI16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925386 ID=FC925386; Name=FC925386; organism=Citrus clementina; type=EST; length=708bp
CGACCTTCTCAGGTCTCCATCTTCAGCTGCAAACATGGCAGATGGATCGT
ATCCATCCGTATTTCAGAAAATGCAAGGCCAGTCATACTTCATTTCTGGG
GTCTCCCCCAATTTGTATGCCCACAACTACAGTGTGGCAGGTTCCTTTGT
TAATAGAGGATCACAGAATTCTTTTTGGGCAGCAAGTCAGGGAACTGGCC
TGGCACTTGTGTCTCCTGTTTCTCCTATATTCGTACAAGCTCCATCAGAA
AAAAGTCTTTCTTCTTTTTTGGTGGATTTTCTCATGGGAGGAGTTTCAGC
AGCTGTTTCCAAGACTGCAGCTGCTCCTATTGAGCGGGTTAAGCTTTTGA
TTCAGAATCAAGATGAGATGATCAAGAGTGGTCGGCTCTCGCATCCGTAC
AAGGGGATTTCTGATTGCTTTGGTAGAACTGTTAAGGATGAAGGCATACT
ATCTCTTTGGAGAGGCAACACTGCCAATGTTATCAGATACTTCCCTACCC
AGGCCCTGAACTTTGCATTCAAGGATTACTTTAAGAGGCTGTTTAACTTC
AAGAAAGACAGAGATGGCTACTGGAAGTGGTTTGCTGGGAACTTGGCATC
TGGTGGGGCTGCTGGTGCTTCATCGCTTCTTTTTGTGTATTCGCTTGACT
ATGCAAGAACACGTTTGGCAAATGATGCTAAGGCAGCTAAAAAGGGTGGG
GGAAGGCA
back to top