FC925387

Overview
NameFC925387
Unique NameFC925387
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length753
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC925387 vs. ExPASy Swiss-Prot
Match: ERG1_CANGA (Squalene monooxygenase OS=Candida glabrata GN=ERG1 PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11
Identity = 31/72 (43.06%), Postives = 47/72 (65.28%), Query Frame = 3 
Query:  462 LAHTLGKDGRRVHVIERDVTEPDRIVGELLQPGGYLKLVELGLEDCVEEIDAQQVLGYALFKDGKSTRLSYP 677
            +A  L + G++V ++ER+ ++PDRIVGEL+QPGG   L  LG+   +  IDA  V GY +F +G+   + YP
Sbjct:   26 VATALARKGKKVLIVEREWSQPDRIVGELMQPGGLRALRSLGMIQSINNIDAYPVTGYTVFYNGEHVDIPYP 97
The following BLAST results are available for this feature:
BLAST of FC925387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ERG1_CANGA5.588e-1143.06Squalene monooxygenase OS=Candida glabrata GN=ERG1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YH05FM1 TF Citrus clementina cDNA clone KN0AAP3YH05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925387 ID=FC925387; Name=FC925387; organism=Citrus clementina; type=EST; length=753bp
TCTAACTGTAACTTTTGTTTATAATAAGAAGCGGCCTCTCCCTCCGAGTT
TCTCTCTCCTCACCGATCTGTCTTCACCACCACAAAACCCCACGAAAAAA
CAAACAAAAACAGAAGGAGCCAGCTGGCAGCTGCTGCTACTGCTGTTCCC
AAAACAGAAACGAAATCTTGATCAAACAACGACCATCCATCTTTCTTGCA
TCATCAACCTCGGGTTCTCACCGTTTCTTCAATCTTTCTACCGAGAACAA
GGCTTCGATGGATCACTACATTGCGGGCACTCTCATTGCCGCTGTGTTTC
TCCTTCTCTTCGTTGTCCGCCGCAACGACAGTAAGAAGCCAAGGAAGGTT
TCCACGACGTACAAGACGCAGAACGACGTTTTTCGGAGCTCTGTTAACGC
CGGAAAGAATGGCTCCCCTACCGACGTCATCATTGTTGGTGCCGGTGTTG
CCGGTGCTGCCTTGGCTCATACTCTTGGCAAGGATGGAAGACGAGTTCAT
GTGATAGAAAGAGACGTGACTGAGCCTGACAGAATTGTTGGTGAACTGCT
TCAGCCTGGAGGATACCTGAAATTAGTTGAATTAGGTCTTGAGGATTGTG
TGGAAGAAATCGATGCCCAGCAAGTACTTGGTTATGCTCTTTTCAAGGAT
GGAAAAAGTACAAGACTGTCATATCCATTGGAGAAATTTCATGCAGATGT
TTCTGGAAGGAGCTTCTACAATGGGCGTTTCCATCAACGGATGAGAAAAA
AAA
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