FC925389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC3_YEAST (Ubiquitin-conjugating enzyme E2-34 kDa OS=Saccharomyces cerevisiae GN=CDC34 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.273e-15 Identity = 39/129 (30.23%), Postives = 67/129 (51.94%), Query Frame = 1 Query: 67 NLMVWHCSIPG-KAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNG----------WRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQ 420 N+ W+ + + + GGFF + F ED+P PP+ +F +HPNVY G +C+SIL++ W P TV+ +L+ I LL+ PN PA + + ++ +YK+RV+ + ++ Sbjct: 38 NIFTWNIGVMVLNEDSIYHGGFFKAQMRFPEDFPFSPPQFRFTPAIYHPNVYRDGRLCISILHQSGDPMTDEPDAETWSPVQTVESVLISIVSLLEDPNINSPANVDAAVDYRKNPEQYKQRVKMEVER 166
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.273e-15 Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAK 417 N+ W +I G T +EG + L+L FS DYP K PK KF FHPNV G +CL IL + W A V+ IL+ IQ LL +PN + P + L+ + EY++ V + K Sbjct: 64 NIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDK--WSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLW-SNQEEYRKMVEKLYK 177
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.275e-15 Identity = 40/119 (33.61%), Postives = 63/119 (52.94%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 NL + +I G + +E G F L L+ +DYP + PK +F +HPN+ G +CL +L W PA+ ++ +L+ IQ LL PNP DP + +I++ K + R+ K Y Sbjct: 31 NLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLK--TNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLY 147
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.583e-15 Identity = 42/130 (32.31%), Postives = 61/130 (46.92%), Query Frame = 1 Query: 52 PDGSVNLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNG-----------WRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQ 408 P N W I G T +E G FP L F DYP PPK +F FHPN+YP G VC+SIL+ W P +V++IL+ + +L +PN A + ++ D ++ + +Q Sbjct: 28 PMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQ 157
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.583e-15 Identity = 42/130 (32.31%), Postives = 61/130 (46.92%), Query Frame = 1 Query: 52 PDGSVNLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNG-----------WRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQ 408 P N W I G T +E G FP L F DYP PPK +F FHPN+YP G VC+SIL+ W P +V++IL+ + +L +PN A + ++ D ++ + +Q Sbjct: 28 PMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQ 157
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.583e-15 Identity = 42/130 (32.31%), Postives = 61/130 (46.92%), Query Frame = 1 Query: 52 PDGSVNLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNG-----------WRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQ 408 P N W I G T +E G FP L F DYP PPK +F FHPN+YP G VC+SIL+ W P +V++IL+ + +L +PN A + ++ D ++ + +Q Sbjct: 28 PMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQ 157
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.583e-15 Identity = 42/130 (32.31%), Postives = 61/130 (46.92%), Query Frame = 1 Query: 52 PDGSVNLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNG-----------WRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQ 408 P N W I G T +E G FP L F DYP PPK +F FHPN+YP G VC+SIL+ W P +V++IL+ + +L +PN A + ++ D ++ + +Q Sbjct: 28 PMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKVAKQ 157
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.292e-15 Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 88 SIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQT-------EGYHLFIQDA 381 +IPG GT +EGG F + + + YP +PPK +F +HPN+ SG +CL IL + W PA+T+K LV IQ LL P P DP + Y +F+ A Sbjct: 38 TIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQ--WSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTA 141
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.523e-15 Identity = 45/115 (39.13%), Postives = 61/115 (53.04%), Query Frame = 1 Query: 52 PDGSVNLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKR 396 PDG N+ W +I G T +E F ++L F DYP KPP KF FHPNV +G +CL IL + W P V+ +L+ IQ LL +PN P + L+ + EYK+ Sbjct: 30 PDGD-NIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDK--WSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLW-SNQDEYKK 140
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.244e-14 Identity = 39/110 (35.45%), Postives = 57/110 (51.82%), Query Frame = 1 Query: 97 GKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 G GT +EGG F + + +YP KPPK +F +HPN+ +G +CL IL N W P IT+K L+ +Q LL P P DP E +++D + + + Y Sbjct: 41 GPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILK--NAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLY 148 The following BLAST results are available for this feature:
BLAST of FC925389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 210
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925389 ID=FC925389; Name=FC925389; organism=Citrus clementina; type=EST; length=604bpback to top |