FC925389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBCB_DICDI (Ubiquitin conjugating enzyme E2 B OS=Dictyostelium discoideum GN=ubcB PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.624e-14 Identity = 37/120 (30.83%), Postives = 60/120 (50.00%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPS-GTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 NL W ++ G G+ +E G F + + DYP KPP KF +HPN+ S G +C + + W P + + +L I+ +L PNP +P +TE F D + + ++ K+Y Sbjct: 30 NLQKWKATVQGPEGSPFEKGVFSMDIDIPADYPFKPPTLKFTTKIYHPNIKTSDGAICAEVFST---WSPQLKILDVLTTIRSILTDPNPDNPLETEIAQQFKTDRNAFNKTAKEWTKKY 146
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2SA_XENLA (Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus laevis GN=ube2s-A PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.624e-14 Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 88 SIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVR 405 +I G GT + GG F + L +D+P+ PPK F FHPNV P+G +C+++L D W + ++ +L+ I+ LL PNP E L +++ EY R R Sbjct: 46 TIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRD--WTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARAR 149
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.122e-14 Identity = 40/106 (37.74%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 91 IPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILN--EDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRV 402 I G +G+ +EGG F L + E YP +PPK +F +HPN+ +G +CL IL WRPA+ + +L IQ L+ +PNP DP + I +Y R V Sbjct: 38 IIGGSGSPYEGGIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPLMAD-----ISSEFKYNRAV 138
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.122e-14 Identity = 38/106 (35.85%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 88 SIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVR 405 SI G GT + GG F + L +D+P+ PPK F FHPNV +G +C+++L +D W+ + ++ +L+ I+ LL PNP E L +++ EY R R Sbjct: 46 SIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKD--WKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRAR 149
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 3.619e-14 Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDA-AEYKRRV 402 +L W I G T +EGG F L F +DYP +PPK KF +HPNV +G VC+SIL+E + W P TV+ I++ + +L PN PA + + +D E+KR+V Sbjct: 34 DLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKV 157
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 3.619e-14 Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDA-AEYKRRV 402 +L W I G T +EGG F L F +DYP +PPK KF +HPNV +G VC+SIL+E + W P TV+ I++ + +L PN PA + + +D E+KR+V Sbjct: 34 DLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKV 157
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.619e-14 Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDA-AEYKRRV 402 +L W I G T +EGG F L F +DYP +PPK KF +HPNV +G VC+SIL+E + W P TV+ I++ + +L PN PA + + +D E+KR+V Sbjct: 34 DLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKV 157
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 3.619e-14 Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDA-AEYKRRV 402 +L W I G T +EGG F L F +DYP +PPK KF +HPNV +G VC+SIL+E + W P TV+ I++ + +L PN PA + + +D E+KR+V Sbjct: 34 DLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKV 157
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis GN=ube2s PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.726e-14 Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 88 SIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVR 405 +I G GT + GG F + L +D+P+ PPK F FHPNV +G +C+++L +D W+ + ++ +L+ I+ LL PNP E L +++ EY R R Sbjct: 46 NIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSTNGEICVNVLKKD--WKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRAR 149
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBE2S_DROMO (Ubiquitin-conjugating enzyme E2 S OS=Drosophila mojavensis GN=GI11085 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.726e-14 Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 91 IPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAK 417 I G AGT + G F + L S+D+P PPK F FHPNV +G +C++ L +D W+P + +K IL+ I+ LL PNP E + ++ +Y +R R + Sbjct: 50 IDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKD--WKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156 The following BLAST results are available for this feature:
BLAST of FC925389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 210
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925389 ID=FC925389; Name=FC925389; organism=Citrus clementina; type=EST; length=604bpback to top |