FC925389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBE2H_BOVIN (Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.867e-11 Identity = 35/111 (31.53%), Postives = 57/111 (51.35%), Query Frame = 1 Query: 97 GKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLSILNEDNGWRPAITVKQILVG-IQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 G GT +EGG + + + + YP K P F FHPN+ SGTVCL ++N+ W + I + LL PNP DP + +++ EYK+++++ ++Y Sbjct: 40 GPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQT--WTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKY 148
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.745e-11 Identity = 39/131 (29.77%), Postives = 68/131 (51.91%), Query Frame = 1 Query: 37 KPETLPDGSVNLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLSILNEDNGWRPAITVKQILVG-IQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 K +T+ D +L +++ + G + ++GG + + + E YP K P F +HPNV SG VCL ++N+ W P + + + LL PNP+DP E L ++D A Y+ +V++ ++Y Sbjct: 21 KVDTVND---DLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQT--WSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKY 146
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2L6_HUMAN (Ubiquitin/ISG15-conjugating enzyme E2 L6 OS=Homo sapiens GN=UBE2L6 PE=1 SV=4) HSP 1 Score: 67.781 bits (164), Expect = 4.891e-11 Identity = 39/125 (31.20%), Postives = 64/125 (51.20%), Query Frame = 1 Query: 49 LPDGSVNLMVWHCSI-PGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQ-------TEGYHLFIQDAAEYKRR 399 L N++VWH + P + + F L + F +YP KPP KF +HPNV +G +CL I++ +N W+P Q+L + L+++PN +P + T+ LF ++A E+ R Sbjct: 25 LSSDDANVLVWHALLLPDQPPYHLKA--FNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIISSEN-WKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFTLR 146
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.388e-11 Identity = 38/138 (27.54%), Postives = 63/138 (45.65%), Query Frame = 1 Query: 52 PDGSV---NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNED------------NGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQ 420 P GS+ + VW + + G + F YP +PP KF FHPN+Y G +C+SIL ED + W P ++ I++ I +L+ PN + PA + ++ + EY + V + A++ Sbjct: 56 PRGSMENRDYKVWDIYFTLGGDSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEYIKEVIRIARE 193
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UE2NL_HUMAN (Putative ubiquitin-conjugating enzyme E2 N-like OS=Homo sapiens GN=UBE2NL PE=5 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.388e-11 Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 1 Query: 52 PDGSVNLMVWHCSIPGKA-GTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADP 342 PD S N +H I G++ + +EGG F L +E+YP PK +F +HPNV + L IL + W PA+ ++ +L+ IQ LL+ PNP DP Sbjct: 27 PDES-NARYFHVVIAGESKDSPFEGGTFKRELLLAEEYPMAAPKVRFMTKIYHPNVDKLERISLDILKDK--WSPALQIRTVLLSIQALLNAPNPDDP 121
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBE2K_MOUSE (Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=2 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 6.388e-11 Identity = 37/112 (33.04%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 91 IPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 I G T +EGG + L + E YP PPK +F +HPN+ +G +CL IL + W A+T++ +L+ +Q LL P DP + + Q+ +K+ R A Y Sbjct: 43 IAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQ--WAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVY 152
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBE2K_HUMAN (Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 6.388e-11 Identity = 37/112 (33.04%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 91 IPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 I G T +EGG + L + E YP PPK +F +HPN+ +G +CL IL + W A+T++ +L+ +Q LL P DP + + Q+ +K+ R A Y Sbjct: 43 IAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQ--WAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVY 152
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBE2K_BOVIN (Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 6.388e-11 Identity = 37/112 (33.04%), Postives = 57/112 (50.89%), Query Frame = 1 Query: 91 IPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 I G T +EGG + L + E YP PPK +F +HPN+ +G +CL IL + W A+T++ +L+ +Q LL P DP + + Q+ +K+ R A Y Sbjct: 43 IAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQ--WAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVY 152
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 6.388e-11 Identity = 39/131 (29.77%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 37 KPETLPDGSVNLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYP-SGTVCLSILNEDNGWRPAITVKQIL-VGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 K ET+ DG + ++ G + ++GG + + + + YP K P F +HPNV SG+VCL ++N+ W P + + + LL PNP+DP E L ++D Y++RV++ ++Y Sbjct: 21 KVETINDG---MQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQT--WSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKY 146
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.388e-11 Identity = 37/121 (30.58%), Postives = 59/121 (48.76%), Query Frame = 1 Query: 46 TLPDGSVNLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQ 408 + P+G +LM + SI G + G F T S YP + PK K +HPN+ G VCL+IL ED W+P + + ++ G+ L +PN DP + + + ++ VR+ Sbjct: 51 SFPNGKDDLMNFEVSIKPDDGY-YHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED--WKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRR 168 The following BLAST results are available for this feature:
BLAST of FC925389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 210
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925389 ID=FC925389; Name=FC925389; organism=Citrus clementina; type=EST; length=604bpback to top |