FC925389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.992e-21 Identity = 48/119 (40.34%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 +L W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+TV ++L+ I LL PNP DP E H + D +Y R R+ ++Y Sbjct: 29 DLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQ--WSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAREWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.213e-21 Identity = 46/115 (40.00%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + + + GG F +T+HF DYP KPPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL PNP DP E H++ D +Y+ R ++Y Sbjct: 33 WQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.809e-21 Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 ++ W +I G A + + GG F +T+HF DYP KPPK F +HPN+ +G++CL IL E W PA+TV ++L+ I LL PNP DP E H++ D +Y+ + ++Y Sbjct: 29 DMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQ--WSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.809e-21 Identity = 46/115 (40.00%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + + + GG F +T+HF DYP KPPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL PNP DP E H++ D +Y+ R ++Y Sbjct: 33 WQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.893e-21 Identity = 47/119 (39.50%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 +L W SI G A + + GG F L++HF DYP KPPK F +HPN+ +G +CL IL + W PA+T+ ++L+ I LL NP DP E H++ D +Y+ R+ K+Y Sbjct: 30 DLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQ--WSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATAREWTKKY 146
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.161e-20 Identity = 44/119 (36.97%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 +L W +I G + + GG F L +HF DYP KPPK F +HPN+ +G++CL IL + W PA+T+ ++L+ I +L PNP +P E H++ D A Y+ R+ ++Y Sbjct: 29 DLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQ--WSPALTISKVLLSICSMLTDPNPDEPLVPEIAHVYKTDRARYEATAREWTRKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.981e-20 Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 +L W +I G + + + GG F L +HF DYP KPPK F +HPN+ +G++CL IL + W PA+T+ ++L+ I +L PNP DP E H++ A+Y+ R+ ++Y Sbjct: 29 DLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQ--WSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQYESTAREWTRKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 1.981e-20 Identity = 44/115 (38.26%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + + GG F +++HF DYP KPPK F +HPN+ +G++CL IL E W PA+T+ ++L+ I LL PNP DP E H++ D ++Y+ R ++Y Sbjct: 33 WQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.981e-20 Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 +L W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+TV ++L+ I LL PNP DP + ++ D +Y R R+ ++Y Sbjct: 29 DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQ--WSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.981e-20 Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 +L W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+TV ++L+ I LL PNP DP + ++ D +Y R R+ ++Y Sbjct: 29 DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQ--WSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKY 145 The following BLAST results are available for this feature:
BLAST of FC925389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 210
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925389 ID=FC925389; Name=FC925389; organism=Citrus clementina; type=EST; length=604bpback to top |