FC925389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.981e-20 Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 +L W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+TV ++L+ I LL PNP DP + ++ D +Y R R+ ++Y Sbjct: 29 DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQ--WSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 +L W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R+ ++Y Sbjct: 29 DLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 +L W SI G + + + GG F L++HF DYP KPPK F +HPN+ SG +CL IL + W PA+T+ ++L+ I LL NP DP E ++ D A+Y+ ++ K+Y Sbjct: 30 DLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINSSGNICLDILKDQ--WSPALTLSKVLLSICSLLTDANPDDPLVPEIAQIYKTDKAKYEATAKEWTKKY 146
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.413e-20 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.764e-20 Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 +L W SI G + + GG F L++HF DYP KPPK +HPN+ +G +CL IL + W PA+T+ ++L+ I LL NP DP E H++ QD +Y+ ++ K+Y Sbjct: 29 DLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPKIALTTKIYHPNINSNGNICLDILKDQ--WSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYEATAKEWTKKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.528e-20 Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 +L W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D Y + R+ ++Y Sbjct: 29 DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQKY 145 The following BLAST results are available for this feature:
BLAST of FC925389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 210
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925389 ID=FC925389; Name=FC925389; organism=Citrus clementina; type=EST; length=604bpback to top |