FC925389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.832e-20 Identity = 44/115 (38.26%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + + GG F + +HF DYP KPPK F FHPN+ +G +CL IL + W PA+T+ ++L+ I LL PNP DP E H++ D +Y+ R ++Y Sbjct: 33 WQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D3_RAT (Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.832e-20 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D3_PONAB (Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.832e-20 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D3_MOUSE (Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.832e-20 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D3_MACFA (Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis GN=UBE2D3 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.832e-20 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D3_HUMAN (Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.832e-20 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2D2_PIG (Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.832e-20 Identity = 45/115 (39.13%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQ--WSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKY 145
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.677e-19 Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 46 TLPDGSVNLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQ 408 ++ S N+ W I G GT +EGG F L++ F DYP KPPK F +HPN+ G++C++IL + W PA+ V+++L+ I LL++PNP DP E LF + ++ +R R+ Sbjct: 28 SIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDK--WTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRARE 146
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.861e-19 Identity = 45/124 (36.29%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 52 PDGSVNLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 P ++ W +I G + + GG F +++ FS DYP KPPK F +HPN+ G++CL IL E W PA T ++L+ I LL PNP DP E HL+ D ++Y+ ++ ++Y Sbjct: 25 PVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNFKTKVYHPNIDSKGSICLDILKEQ--WSPAPTTSKVLLSICSLLTDPNPNDPLVPEIAHLYKVDKSKYESTAQKWTQKY 146
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.861e-19 Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 W +I G + ++GG F LT+ F +YP KPPK +F +HPNV +G++CL IL W PA+T+ ++L+ I LL PNP DP E ++ D +Y R R+ ++Y Sbjct: 33 WQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILRSQ--WSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNRTAREWTQKY 145 The following BLAST results are available for this feature:
BLAST of FC925389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 210
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925389 ID=FC925389; Name=FC925389; organism=Citrus clementina; type=EST; length=604bpback to top |