FC925389
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.046e-18 Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 N+ W +I G G+ +EGG F L + F+ +YP KPPK F +H N+ G +CL IL ++ W PA+T+ ++L+ I LL NPADP ++ + AE+ R RQ K+Y Sbjct: 75 NIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDN--WSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRY 191
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.202e-17 Identity = 46/123 (37.40%), Postives = 67/123 (54.47%), Query Frame = 1 Query: 52 PDGSVNLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQ 420 PD NL+ W +I G + T +EG F +++ F +YP PP F +HPNV SG +CL IL + W V+ IL+ +Q LL +PN A P + L+ +D EYKR + Q+ K+ Sbjct: 52 PDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDK--WSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYKRLLMQRYKE 172
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.497e-17 Identity = 42/129 (32.56%), Postives = 65/129 (50.39%), Query Frame = 1 Query: 52 PDGSVNLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVR 405 P N+ +W C I G T + G F L F +DYP PPK F HPN+YP+G VC+SIL+ + W P +V++IL+ + +L +PN A + L+ + E++R+V+ Sbjct: 28 PKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVK 156
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC20_ARATH (Ubiquitin carrier protein E2 20 OS=Arabidopsis thaliana GN=UBC20 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.965e-17 Identity = 48/117 (41.03%), Postives = 65/117 (55.56%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAK 417 N+ W +I G T +EG + L+L FS DYP KPPK KF FHPNV G +CL IL + W A V+ IL+ IQ LL +PN + P T+ L+ + EY++ V + K Sbjct: 63 NIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDK--WSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLW-SNQEEYRKMVEKLYK 176
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.017e-16 Identity = 43/129 (33.33%), Postives = 66/129 (51.16%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNG------WRPAITVKQILVGIQDLLDQPNPADPAQTEG-----YHLFIQDAAEYKRRVRQQAKQ 420 N+ W + G T +EGG F + F +YP PPK F +HPN+YP G +C+SIL+ DN W PA + IL+ + LL++PNP PA + +++ +D Y V++ K+ Sbjct: 29 NITEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPKLTFTSEMWHPNIYPDGRLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKYVYKEDLESYPMEVKKTVKK 157
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.329e-16 Identity = 45/125 (36.00%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 49 LPDGSVNLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 423 +PD + N +H + G + +EGG F L L EDYP PK +F +HPN+ G +CL +L + W PA+ ++ IL+ IQ LL PNP DP + L+ + AE R R+ ++Y Sbjct: 26 IPDEN-NARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDK--WSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQKY 147
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.329e-16 Identity = 44/133 (33.08%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSIL---NEDNG-------WRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQYPALL 435 N+ W +I G T ++GG+F + F ++YP+ PP +F +HPNVYP G VC+SI ++ NG W P TV+ I++ I +L PN PA E + + E+K++VR+ ++ +L Sbjct: 36 NVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISIHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKQDEFKKKVRRAVRKSQEML 168
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.329e-16 Identity = 44/121 (36.36%), Postives = 63/121 (52.07%), Query Frame = 1 Query: 79 WHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNE-----------DNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQ 408 W + G T +EGGFF L F DYP KPPK KF +HPN+ G VC+SIL++ + W P TV+ IL+ + +L PN PA + + ++ AE+K++V Q Sbjct: 36 WEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQ 156
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.736e-16 Identity = 43/123 (34.96%), Postives = 63/123 (51.22%), Query Frame = 1 Query: 67 NLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILN-----------EDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRV 402 N+ W +I G T +EGGFF + F ++YP+ PP +F +HPNVYP G VC+SIL+ W P TV+ I++ I +L PN PA E + + E+K++V Sbjct: 33 NIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKV 155
BLAST of FC925389 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.267e-16 Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 52 PDGSVNLMVWHCSIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAK 417 PDG NL W ++ G T +E + LTL F DYP KPP KF +HPNV SG +CL IL E+ W + V+ IL+ +Q LL +PN A P + ++ + EYK+ + ++ K Sbjct: 54 PDGD-NLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKEN--WTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYK 171 The following BLAST results are available for this feature:
BLAST of FC925389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 210
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925389 ID=FC925389; Name=FC925389; organism=Citrus clementina; type=EST; length=604bpback to top |