FC925394

Overview
NameFC925394
Unique NameFC925394
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length648
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC925394 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.013e-13
Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 1 
Query:  490 NRCITCRRRVGLTGFKCKCGSVFCGTHRYPEQHACSFDFKKMGKELIAKANP 645
            NRC  CR++VGLTGF C+CG++FCG HRY ++H C +D+K      I K NP
Sbjct:  152 NRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENP 203
[Close]
BLAST of FC925394 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.013e-13
Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 1 
Query:  490 NRCITCRRRVGLTGFKCKCGSVFCGTHRYPEQHACSFDFKKMGKELIAKANP 645
            NRC  CR++VGLTGF C+CG++FCG HRY ++H C +D+K      I K NP
Sbjct:  152 NRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENP 203
The following BLAST results are available for this feature:
BLAST of FC925394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
ZFAN5_MOUSE6.013e-1353.85AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
ZFAN5_HUMAN6.013e-1353.85AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI20FM1 TF Citrus clementina cDNA clone KN0AAP8YI20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925394 ID=FC925394; Name=FC925394; organism=Citrus clementina; type=EST; length=648bp
TTACAGGTAACGTTAAATTTTTGTATTAGTTTCTCATAAATAGTTTTTTT
TTTTTTTTGGGTTAATCCATTAACTTGATTTCAAATAGGAATAATATGGA
TAGAATCGAAGTCTTATAAATTTTTATATTAGCTTGCAAGATTTCAATCA
ACTGATTTGGAATGGAAAATTTTGCTGTAAAGGTTGAAGATGGCGGAAGA
GCACAGATGTCAAGCACCCCGTTTGTGCGTGAACAACTGCGGATTTTTCG
GGAGCCCAACAACTCAAAATCTCTGCTCCAAATGTTTTCGCGATCTTCAG
TTGAAAGCACAACAATCTTCCTCGGCCAAACACGCCCTTAACCAAACCCT
GATTTCTTCGTCGTCGTCGTCGCCGTCGCCGTCGGTTGATTTGTCTCTGC
GCGAGAGACCGGCGACGGATGTGGAGGTAGCGGCAGAGGCGGAGAAGCCG
CCGGCTGAAGTGGCCGCTCCGGTGCAGTCGACGGCGGCGAACAGGTGCAT
AACTTGCAGGAGGCGCGTGGGGCTCACGGGGTTCAAGTGCAAGTGCGGGT
CGGTGTTCTGCGGGACCCACAGGTACCCGGAGCAGCACGCGTGCTCGTTC
GATTTCAAAAAGATGGGCAAAGAACTGATTGCGAAGGCAAATCCCTGT
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