FC925425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 192.586 bits (488), Expect = 1.229e-48 Identity = 94/174 (54.02%), Postives = 130/174 (74.71%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P V L + + + +L P+V++MK++K P +Y IGGL+ QI+EIKE +ELP+ PEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+R+ GSEL+QKY+G+G R+ R++F +A E+APSI+F+DEID+ G+ R S S G+ E+QRTMLELLNQL+G Sbjct: 143 PGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNS-GGEREIQRTMLELLNQLDG 315
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.229e-48 Identity = 99/190 (52.11%), Postives = 128/190 (67.37%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 +YVV P TRVAL + + LP +V PLV M E + +Y IGGL +QI+E++EVIELP+ PELF+ +GI PKG LLYGPPGTGKTLLARAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+ G R G+ + D E+QRT++ELLNQ++G Sbjct: 78 RYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDG 266
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.229e-48 Identity = 99/190 (52.11%), Postives = 128/190 (67.37%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 +YVV P TRVAL + + LP +V PLV M E + +Y IGGL +QI+E++EVIELP+ PELF+ +GI PKG LLYGPPGTGKTLLARAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+ G R G+ + D E+QRT++ELLNQ++G Sbjct: 78 RYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDG 266
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.229e-48 Identity = 99/190 (52.11%), Postives = 128/190 (67.37%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 +YVV P TRVAL + + LP +V PLV M E + +Y IGGL +QI+E++EVIELP+ PELF+ +GI PKG LLYGPPGTGKTLLARAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+ G R G+ + D E+QRT++ELLNQ++G Sbjct: 78 RYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDG 266
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS10_BOVIN (26S protease regulatory subunit S10B OS=Bos taurus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.229e-48 Identity = 99/190 (52.11%), Postives = 128/190 (67.37%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 +YVV P TRVAL + + LP +V PLV M E + +Y IGGL +QI+E++EVIELP+ PELF+ +GI PKG LLYGPPGTGKTLLARAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+ G R G+ + D E+QRT++ELLNQ++G Sbjct: 78 RYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDG 266
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.099e-48 Identity = 91/174 (52.30%), Postives = 129/174 (74.14%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P VAL + +LP K P+V M++ + P+ TY IGGL++QIKE++EV+ELP+K PE+F +G+ PKGVLLYGPPGTGKT+LA+AVA ++ FI V SE QK++GEG+R+VRELF MA+ APSIIF+DEID+ G+ R+ G+ +G+ E+QRT+++LL +L+G Sbjct: 95 PGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDG 267
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.099e-48 Identity = 91/174 (52.30%), Postives = 129/174 (74.14%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P VAL + +LP K P+V M++ + P+ TY IGGL++QIKE++EV+ELP+K PE+F +G+ PKGVLLYGPPGTGKT+LA+AVA ++ FI V SE QK++GEG+R+VRELF MA+ APSIIF+DEID+ G+ R+ G+ +G+ E+QRT+++LL +L+G Sbjct: 95 PGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDG 267
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.099e-48 Identity = 91/174 (52.30%), Postives = 129/174 (74.14%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P VAL + +LP K P+V M++ + P+ TY IGGL++QIKE++EV+ELP+K PE+F +G+ PKGVLLYGPPGTGKT+LA+AVA ++ FI V SE QK++GEG+R+VRELF MA+ APSIIF+DEID+ G+ R+ G+ +G+ E+QRT+++LL +L+G Sbjct: 95 PGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDG 267
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.099e-48 Identity = 91/174 (52.30%), Postives = 129/174 (74.14%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P VAL + +LP K P+V M++ + P+ TY IGGL++QIKE++EV+ELP+K PE+F +G+ PKGVLLYGPPGTGKT+LA+AVA ++ FI V SE QK++GEG+R+VRELF MA+ APSIIF+DEID+ G+ R+ G+ +G+ E+QRT+++LL +L+G Sbjct: 95 PGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDG 267
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.099e-48 Identity = 91/174 (52.30%), Postives = 129/174 (74.14%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P VAL + +LP K P+V M++ + P+ TY IGGL++QIKE++EV+ELP+K PE+F +G+ PKGVLLYGPPGTGKT+LA+AVA ++ FI V SE QK++GEG+R+VRELF MA+ APSIIF+DEID+ G+ R+ G+ +G+ E+QRT+++LL +L+G Sbjct: 95 PGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDG 267 The following BLAST results are available for this feature:
BLAST of FC925425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925425 ID=FC925425; Name=FC925425; organism=Citrus clementina; type=EST; length=587bpback to top |