FC925425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PS6AB_ARATH (26S protease regulatory subunit 6A homolog B OS=Arabidopsis thaliana GN=RPT5B PE=1 SV=3) HSP 1 Score: 181.03 bits (458), Expect = 3.700e-45 Identity = 92/174 (52.87%), Postives = 127/174 (72.99%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P V + DSY++ LPS+ V M+V++ P Y+ IGGL++QI+E+ E I LP+ E FE LGI PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F++A+E +P IIF+DEID+ G+ R S +GD EVQRTMLELLNQL+G Sbjct: 131 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDG 303
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 3.700e-45 Identity = 89/174 (51.15%), Postives = 123/174 (70.69%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 PS VAL S L +LP + +++++ ++ PD Y IGG+D Q +EI+E +ELP+ EL+ +GI P+GVL+YGPPG GKT+LA AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E++P+IIF+DEID+ + R + D EVQR +LELLNQ++G Sbjct: 123 PSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDA-QTGADREVQRILLELLNQMDG 295
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 4.832e-45 Identity = 92/174 (52.87%), Postives = 126/174 (72.41%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P V + DSY++ LPS+ V M+V++ P Y+ IGGL++QI+E+ E I LP+ E FE LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E AP IIF+DEID+ G+ R S +GD EVQRTMLELLNQL+G Sbjct: 132 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDG 304
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 4.832e-45 Identity = 92/174 (52.87%), Postives = 126/174 (72.41%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P V + DSY++ LPS+ V M+V++ P Y+ IGGL++QI+E+ E I LP+ E FE LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E AP IIF+DEID+ G+ R S +GD EVQRTMLELLNQL+G Sbjct: 132 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDG 304
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 6.311e-45 Identity = 94/190 (49.47%), Postives = 124/190 (65.26%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 +YVV TRV L + + LP +V P+V M E + +Y +GGL QI+E++E IELP+ PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AREH P IIFMDEID+ G R G+ + D E+QRT++ELLNQL+G Sbjct: 84 RYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQLDG 272
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 6.311e-45 Identity = 94/190 (49.47%), Postives = 124/190 (65.26%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 +YVV TRV L + + LP +V P+V M E + +Y +GGL QI+E++E IELP+ PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AREH P IIFMDEID+ G R G+ + D E+QRT++ELLNQL+G Sbjct: 84 RYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQLDG 272
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 8.242e-45 Identity = 90/174 (51.72%), Postives = 128/174 (73.56%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P + VAL + +LP + V +V + P+ Y IGGL++QI EI+EVIELP+K PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA ++ TFI+V SE QK++GEG+R+VRE+F +AR APSI+F+DEID+ G+ R+ G+ +G+ E+QRT+++LL +++G Sbjct: 95 PGSLVALTQRGSTIVEVLPEREDAYVKSFEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGT-SGEREIQRTLMQLLAEIDG 267
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 8.242e-45 Identity = 94/189 (49.74%), Postives = 128/189 (67.72%), Query Frame = 1 Query: 19 YVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 YVV PS+ VAL S L ILP + + ++ + PD TY +GGLD Q +EI+E +ELP+ +L++ +GI P+GVLLYGPPGTGKT+L +AVA+ T +FIRV+GSE VQKY+GEG RMVR++F MARE++P+IIF+DEID+ + R + D EVQR +LELLNQ++G Sbjct: 112 YVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDA-QTGADREVQRILLELLNQMDG 299
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.076e-44 Identity = 89/174 (51.15%), Postives = 121/174 (69.54%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P RV L + + ILP +V P++ M E +Y IGGL QI+E++EV+ELP+ PELF +GI PKGVLLYGPPGTGKTLLARA+A + + F++V S +V KYIGE +R++RE+F AR+H P +IFMDEID+ G R G+ + D E+QRT++ELLNQ++G Sbjct: 98 PGARVTLDLTTLTILKILPREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQMDG 270
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.406e-44 Identity = 88/174 (50.57%), Postives = 125/174 (71.84%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P V + DSY++ LP + V M++++ P Y IGGLD+QI+E+ E + LP+ E FES+GI PKGVL+YGPPGTGKTLLARA A T+ T+++++G +LVQ +IG+G+++VR+ F +A+E P+IIF+DE+D+ G+ R S +GD EVQRTMLELLNQL+G Sbjct: 129 PGDLVGINKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDS-EVSGDREVQRTMLELLNQLDG 301 The following BLAST results are available for this feature:
BLAST of FC925425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925425 ID=FC925425; Name=FC925425; organism=Citrus clementina; type=EST; length=587bpback to top |