FC925445
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.647e-41 Identity = 81/169 (47.93%), Postives = 108/169 (63.91%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508 +FLGLDNAGKTTLLHMLKD+R+ QH PT +PTSE++S+G I F +DLGGH ARRVW ER ES+ +VP L+LGNKID P A SE++L++ L + + TGKG V+ + RP+EVFMCS++++ GYG+G +WL QY+ Sbjct: 25 VFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLKWQLNIQHMCTGKGDVSRNEMASRPMEVFMCSVLQRQGYGEGIRWLGQYL 193
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1_PICGU (Small COPII coat GTPase SAR1 OS=Pichia guilliermondii GN=SAR1 PE=3 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 1.314e-40 Identity = 91/169 (53.85%), Postives = 106/169 (62.72%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508 LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+W ER AESK VPFL+LGNKID A E EL+ LGL N TTGK L + RP+EVFM S+V +MGYG+GFKWLS +I Sbjct: 24 LFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADTERLAESKAELESLFRIEELSQVPFLILGNKIDKSTAIGEMELKSALGLYN-TTGKDVTKLPEGQ-RPIEVFMVSVVMRMGYGEGFKWLSSFI 190
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.314e-40 Identity = 92/169 (54.44%), Postives = 105/169 (62.13%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508 LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W ERF E++ NVPF VLGNKID P A SE ELR LGL N TTG K+ RP+E+FMCS+V K GY + FKWLS+YI Sbjct: 27 LFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHLQARRLWKDYFPEVNGIVFLVDAADPERFNEARIELDALFQIKELDNVPFAVLGNKIDSPSAVSETELRAALGLMN-TTGYTKI----EGQRPIELFMCSVVMKSGYSEAFKWLSEYI 190
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.478e-39 Identity = 89/169 (52.66%), Postives = 105/169 (62.13%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508 LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W ERF E++ VPF++LGNKID P A SE ELR LGL N TTG ++ RP+E+FMCS+V K GY + F+WLSQYI Sbjct: 27 LFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILGNKIDAPSAVSETELRAALGLLN-TTGDARI----EGQRPVELFMCSVVMKSGYLEAFQWLSQYI 190
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1_YEAST (Small COPII coat GTPase SAR1 OS=Saccharomyces cerevisiae GN=SAR1 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.236e-39 Identity = 89/169 (52.66%), Postives = 106/169 (62.72%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508 LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W ERF E++ +VPF++LGNKID P A SE ELR LGL N TTG ++ RP+EVFMCS+V + GY + F+WLSQYI Sbjct: 27 LFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLN-TTGSQRI----EGQRPVEVFMCSVVMRNGYLEAFQWLSQYI 190
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1_CANGA (Small COPII coat GTPase SAR1 OS=Candida glabrata GN=SAR1 PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.673e-38 Identity = 87/169 (51.48%), Postives = 105/169 (62.13%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508 LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W +RF E++ +VPF++LGNKID A SE ELR LGL N TTG ++ RP+EVFMCS+V + GY + F+WLSQYI Sbjct: 26 LFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHVQARRLWKDYFPEVNGIVFLVDSADPDRFDEARVELDALFNITELKDVPFVILGNKIDAANAVSEAELRSALGLLN-TTGSQRI----EGQRPVEVFMCSVVMRNGYLEAFQWLSQYI 189
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.248e-35 Identity = 75/169 (44.38%), Postives = 99/169 (58.58%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 508 +F+GLDNAGK+TLL MLK+ PTQ PTS+EL +G I+FK FDLGGH++AR++W RF ES++ P L+L NK+DI A S E + G+ + TGKG NL S+ RPLEVF CS++ + GY DGFKWLS+Y+ Sbjct: 24 VFVGLDNAGKSTLLAMLKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHLLTGKGGSNLR-SDQRPLEVFPCSVINRFGYTDGFKWLSKYL 191
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1B_DICDI (GTP-binding protein Sar1B OS=Dictyostelium discoideum GN=sarB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14 Identity = 53/168 (31.55%), Postives = 71/168 (42.26%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVW-XXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQ 502 + +GL NAGKTTLLH+L L H PT P +E + G + FKA+DLGG Q R +W ESK P L+LG+K D + E L L + F G L +SN P ++ M S + + G D WL + Sbjct: 24 VIIGLGNAGKTTLLHLLVTGSLKSHIPTLRPNAESFTYGNVNFKAYDLGGQQNLRFLWKQYVPDSKTIIVFMVDSSDYNSIIESKSEIHDILGDEHLSQSPLLILGSKCDAKGHHNRENLIDLLDIRRFELG-----LNNSNNVPFDLIMTSSITRYGITDMLNWLDK 186
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: SAR1_ENCCU (Small COPII coat GTPase SAR1 OS=Encephalitozoon cuniculi GN=SAR1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12 Identity = 54/185 (29.19%), Postives = 77/185 (41.62%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLAD-SNVRPLEVFMCSIVRKMG------YGDGFKWLSQYIK*GNAQEVL 535 LFLG+DNAGKTTL++ LK + + PT +P++ + IG +K + DLGGH AR W ERF E ++ P +VL NKID+ E + S + G N D + +++F +I FKWL I N +E L Sbjct: 39 LFLGIDNAGKTTLVNKLKSDSTDVYMPTHHPSTSYIEIGNLKAQVIDLGGHTAARLAWRDYFYDCHGIVFIVDVHDVERFQEVRE--AYETVLSLEKRAPVVVLMNKIDLEGHTPETAEADYQWKSWLSQETGIENQEDPERGQVVKIFYVTITSGSANSITGPLARAFKWLEAMITYNNKKESL 221
BLAST of FC925445 vs. ExPASy Swiss-Prot
Match: ARL3_CAEEL (ADP-ribosylation factor-like protein 3 OS=Caenorhabditis elegans GN=arl-3 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 48/171 (28.07%), Postives = 69/171 (40.35%), Query Frame = 2 Query: 2 LFLGLDNAGKTTLLHMLKDERLVQHQPTQ-YPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYIK 511 L LGLDNAGKTT+L L E + PT+ + ++G I+ +D+GG + R W +RF E VP L+ NK D+ AAS EE+ K+NL R + CS ++ G DG W++ +K Sbjct: 21 LLLGLDNAGKTTILKQLSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWDIGGQRSIRPYWSNYYENIDTLIFVIDSNDKKRFDEMNIELGELLDEEKLRKVPVLIFANKQDLVTAASSEEI------------TRKLNLDLLRDRTWHIQACSALKNEGINDGITWVASNLK 179 The following BLAST results are available for this feature:
BLAST of FC925445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925445 ID=FC925445; Name=FC925445; organism=Citrus clementina; type=EST; length=694bpback to top |