FC925452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925452 vs. ExPASy Swiss-Prot
Match: RER1_SCHPO (Protein rer1 OS=Schizosaccharomyces pombe GN=rer1 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.851e-33 Identity = 68/159 (42.77%), Postives = 95/159 (59.75%), Query Frame = 2 Query: 149 AWRLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEIEVA------DGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRPIAHMIKYRYIPFNI 607 A RLY++++D+T P+ YRW+ ++A++ +R+ V+ P DP +E A + +LPT DEF+PFIRRLPEFKFWYS +A A V +FF +FDVPVFWPIL+ Y++VL RR I HM+KYRY+PF+I Sbjct: 18 AVRLYRHWVDRTIPYTTYRWLTVSGLIALFFIRILLVRGWYIVCYTLAIYLLNLFLAFLTPKFDPSVEQAMKDEEIEEGVLPTSKDDEFRPFIRRLPEFKFWYSSMRATLFALVASFFRIFDVPVFWPILVVYYLVLSFFCFRRQIQHMLKYRYVPFDI 176
BLAST of FC925452 vs. ExPASy Swiss-Prot
Match: RER1_YEAST (Protein RER1 OS=Saccharomyces cerevisiae GN=RER1 PE=1 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 6.583e-31 Identity = 67/152 (44.08%), Postives = 92/152 (60.53%), Query Frame = 2 Query: 158 LYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEIEVAD--GPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRPIAHMIKYRYIPFNI 607 LYQ+YLDK TPHA RW ++ ++ +R+ + P D ++ + L + S+EF+PFIRRLPEFKFWY+ +A I+ +++ FS+FD+PVFWPILL Y+I+LF LTMRR I HMIKYRYIP +I Sbjct: 27 LYQHYLDKVTPHAKERWAVLGGLLCLFMVRITMAEGWYVICYGLGLFLLNQFLAFLTPKFDMSLQQDEENNELEAGEKSEEFRPFIRRLPEFKFWYNSIRATVISLLLSLFSIFDIPVFWPILLMYFILLFFLTMRRQIQHMIKYRYIPLDI 178
BLAST of FC925452 vs. ExPASy Swiss-Prot
Match: RER1_SACPS (Protein RER1 OS=Saccharomyces pastorianus GN=RER1 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.583e-31 Identity = 66/152 (43.42%), Postives = 92/152 (60.53%), Query Frame = 2 Query: 158 LYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEIEVAD--GPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRPIAHMIKYRYIPFNI 607 LYQ+YLDK TPHA RW ++ ++ +R+ + P D ++ + L + S+EF+PFIRRLPEFKFWY+ +A I+ V++ FS+FD+PVFWPILL Y+++LF LTMRR I HM+KYRYIP +I Sbjct: 27 LYQHYLDKVTPHAKQRWAVLGGLLCLFMVRITMAEGWYVICYGLGLFLLNQFLAFLTPKFDMSLQQDEENNELEAGEKSEEFRPFIRRLPEFKFWYNSIRATVISLVLSLFSIFDIPVFWPILLMYFVLLFFLTMRRQIQHMMKYRYIPLDI 178
BLAST of FC925452 vs. ExPASy Swiss-Prot
Match: RER1_DICDI (Protein RER1 homolog OS=Dictyostelium discoideum GN=rer1 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.133e-25 Identity = 64/155 (41.29%), Postives = 82/155 (52.90%), Query Frame = 2 Query: 155 RLYQYYLDKTTPHAVYRWIGTLVIVAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXX-PLVDPEIEVADGPLLPT---KGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRPIAHMIKYRYIPFNI 607 R YQ ++KT RW + +Y LRV P DPE+E G LPT + DE KPFIRRLPEF FW+S+ KA I+ TF D+PVFWPILL Y+I++F +TM++ I HMIKY+YIPF + Sbjct: 24 RKYQNLIEKTISFIPQRWAFVGFLSFLYILRVSLSSGGWYVITYALGIFLLTRFIAFLSPKWDPELEEDSGDSLPTTLNRNDDEAKPFIRRLPEFLFWHSIFKALFISIFCTFIPFLDLPVFWPILLLYFIIIFSVTMKKQIKHMIKYKYIPFTV 178 The following BLAST results are available for this feature:
BLAST of FC925452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925452 ID=FC925452; Name=FC925452; organism=Citrus clementina; type=EST; length=767bpback to top |