FC925495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_YERPA (Uncharacterized exonuclease xni OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=xni PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.404e-13 Identity = 47/150 (31.33%), Postives = 76/150 (50.67%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTR 450 P PD + Q + ++ + + V PG EADD+ TL V+ AG +V +VS DK + Q+L+P++++ F M +++G L P Q D L G + IPGV G+G A L+ + +LE L Q ++ + E + R Sbjct: 72 PMPDNLQQEMPLIRQAFNELGVACWHSPGNEADDLAATLVVKVAGAGHQVTIVSTDKGYCQLLAPNIQIRDY----FQKRWLDMPFVKQEFGVL-PRQLPDYWGLAGISSSKIPGVAGVGAKTATLLLQQADTLEVLYQNLESIPECQRR 216
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_PSEHT (Uncharacterized exonuclease xni OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=xni PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.404e-13 Identity = 52/173 (30.06%), Postives = 81/173 (46.82%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519 P P + L KA+I+ + V E EADD+I TLA ++ +VS DK F L+ + + F + +++G ++ + V+ + GDK ++IPGV+GIG A L+ + S+E+ L D RK L D V+SK L LR D+ Sbjct: 80 PMPQILKDALVQFKAAIEETGIVVFEPINDEADDIIATLANKASHNNISSVIVSTDKGFLPFLNEHIAVYDY----FKKHYLDQDSIKQRFG-VEQKKLVEFWAFAGDKTNDIPGVKGIGTKSAQLLVNNYSSVEDALN--DDALSASLRKKLTENMDMYVISKQLVSLRTDI 245
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: EX53_STRCO (5'-3' exonuclease OS=Streptomyces coelicolor GN=SCO1622 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13 Identity = 52/178 (29.21%), Postives = 90/178 (50.56%), Query Frame = 1 Query: 7 PDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFA---RKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERT---RKALMTFADQAVLSKNLALLRCDLP 522 PDT+ + ++A + A+ + + V G EADDVIGT R+ V +V+ D+D +Q++ + R +R+ + + + D A KYG + + + D+ L GD +D +PGV GIG+ A +L+ +FG L + VD + T RK L ++ + + D+P Sbjct: 89 PDTLSPQVPVIEAVLDALGIARVGVAGYEADDVIGTYTARATGP---VDIVTGDRDLYQLVDDA-RGVRVLYPVKGVGTLNLVDEAALREKYG-VDGAGYADLALLRGDPSDGLPGVPGIGEKTAAKLLAEFGDLAGIQAAVDDPKARLTPTQRKRLTEAGPYLAVAPKVVRVAADVP 261
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: EX53_MYCTU (5'-3' exonuclease OS=Mycobacterium tuberculosis GN=Rv2090 PE=3 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.810e-13 Identity = 45/146 (30.82%), Postives = 75/146 (51.37%), Query Frame = 1 Query: 7 PDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMAS---FGMEDFARKYG---ELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVD 426 PD + + + + A + + PG EADDV+GTLA R + V VVS D+D Q+++ +R+ G +A FG + A +YG + + ++ L GD +D +PGV G+G+ A L+ + GSL+ ++ D Sbjct: 95 PDELTPQVDMIMELLDAFGIAMAGAPGFEADDVLGTLATR--ERRDPVIVVSGDRDLLQVVADDPVPVRVLYLGRGLAKATLFGPAEVAERYGLPAHRAGAAYAELALLRGDPSDGLPGVPGVGEKTAATLLARHGSLDQIMAAAD 238
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: EX53_BACSU (5'-3' exonuclease OS=Bacillus subtilis GN=ypcP PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.673e-12 Identity = 47/172 (27.33%), Postives = 88/172 (51.16%), Query Frame = 1 Query: 7 PDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDLP 522 P ++ K + + + I G EADD IGTLA + + VV+ D+D Q+L+ + + + + + E F + G + P +D+ +L+GD +DN PGV+GIG+ A +LI ++ +++ LL+ + + + + K +D +S+ LA + C +P Sbjct: 86 PVELIPQFDLAKEAAAELGIMNIGFAGYEADDCIGTLADLFANEA-DITVVTGDRDLLQLLTDKVSVALLQKGIGNYKVYTKETFYEETGVM-PKALIDIKALMGDSSDNYPGVKGIGEKTAYKLIREYETIDRLLENLSLLPKGQQGKIQQGLSD-LEMSRKLAEIHCSVP 254
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_VIBVU (Uncharacterized exonuclease xni OS=Vibrio vulnificus GN=xni PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12 Identity = 41/150 (27.33%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTR 450 P P+ ++ GL+ ++ + + + + G EADD++ TLA + G KV ++S DK + Q+LSP+L++ R + + + F + +KP Q D L G + + G+ GIG A +++++F +E D ++ RT+ Sbjct: 77 PMPEPLLNGLEKIQEAWWQLGIDSLLSEGDEADDLVATLACKVAQHGEKVTIISTDKGYCQLLSPTLQI-----RDYFQHRWLDQPFIEQEFGVKPQQLSDYWGLTGISSSQVTGIPGIGPKAAKEILSQFDDIEQAFLSPDLPKKYRTK 221
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_VIBVY (Uncharacterized exonuclease xni OS=Vibrio vulnificus (strain YJ016) GN=xni PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.854e-12 Identity = 41/150 (27.33%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTR 450 P P+ ++ GL+ ++ + + + + G EADD++ TLA + G KV ++S DK + Q+LSP+L++ R + + + F + +KP Q D L G + + G+ GIG A +++++F +E D ++ RT+ Sbjct: 77 PMPEPLLNGLEKIQDAWWQLGIDSLLSEGDEADDLVATLACKVAQHGEKVTIISTDKGYCQLLSPTLQI-----RDYFQHRWLDQPFIEQEFGVKPQQLSDYWGLTGISSSQVTGIPGIGPKAAKEILSQFDDIEQAFLSPDLPKKYRTK 221
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_PSYIN (Uncharacterized exonuclease xni OS=Psychromonas ingrahamii (strain 37) GN=xni PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.417e-11 Identity = 48/173 (27.75%), Postives = 83/173 (47.98%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519 P P+ + QGL ++ + + + EADD+I LA + K +VS DK F+Q+L+ S++L + SF + + + Q D ++ G + I GVEGIG A+ L+ ++GSL N+ Q + + K + + A+L+K L L+ D+ Sbjct: 80 PIPELLKQGLPAIQEQFFDLGIDSLVTEEDEADDLIACLADKIAKQQQKCIIVSTDKGFYQLLNESIQLY-----DYFQNSFVIRQQVHQKMGISIQQLNDYWAITGISSSAIKGVEGIGSKGALSLLQQYGSLNNIFQQAEDSNNKLLTK-IKSQQSNAILAKQLVTLKTDI 246
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_YERPG (Uncharacterized exonuclease xni OS=Yersinia pestis bv. Antiqua (strain Angola) GN=xni PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.182e-11 Identity = 41/128 (32.03%), Postives = 64/128 (50.00%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLI 384 P PD + Q + ++ + + V PG EADD+ TL V+ AG +V +VS DK + Q+L+P++++ F M +++G L P Q D L G + IPGV G+G A L+ Sbjct: 72 PMPDNLQQEMPLIRQAFNELGVACWHSPGNEADDLAATLVVKVAGAGHQVTIVSTDKGYCQLLAPNIQIRDY----FQKRWLDMPFVKQEFGVL-PRQLPDYWGLAGISSSKIPGVAGVGAKTATLLL 194 The following BLAST results are available for this feature:
BLAST of FC925495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925495 ID=FC925495; Name=FC925495; organism=Citrus clementina; type=EST; length=736bpback to top |