FC925495

Overview
NameFC925495
Unique NameFC925495
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_SALTY (Uncharacterized exonuclease xni OS=Salmonella typhimurium GN=xni PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1
Query:    1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519
            P PD +   +  L+A+ +   V+     G EADD+  TLA++  +AG +  +VS DK + Q+LSP LR+     + +  A F  ++F      + P Q  D   L G  +  +PGV GIG   A QL+ +F +LE +   +D+V  E+ RK L T  + A L +++A L+ DL
Sbjct:   72 PMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFG-----VLPRQLPDYWGLAGISSSKVPGVAGIGPKSATQLLIQFQNLEGIYAHLDEV-PEKWRKKLETHKEMAFLCRDIARLQTDL 238          
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_SALPK (Uncharacterized exonuclease xni OS=Salmonella paratyphi A (strain AKU_12601) GN=xni PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1
Query:    1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519
            P PD +   +  L+A+ +   V+     G EADD+  TLA++  +AG +  +VS DK + Q+LSP LR+     + +  A F  ++F      + P Q  D   L G  +  +PGV GIG   A QL+ +F +LE +   +D+V  E+ RK L T  + A L +++A L+ DL
Sbjct:   72 PMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFG-----VLPRQLPDYWGLAGISSSKVPGVAGIGPKSATQLLIQFQNLEGIYAHLDEV-PEKWRKKLETHKEMAFLCRDIARLQTDL 238          
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_SALPB (Uncharacterized exonuclease xni OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=xni PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1
Query:    1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519
            P PD +   +  L+A+ +   V+     G EADD+  TLA++  +AG +  +VS DK + Q+LSP LR+     + +  A F  ++F      + P Q  D   L G  +  +PGV GIG   A QL+ +F +LE +   +D+V  E+ RK L T  + A L +++A L+ DL
Sbjct:   72 PMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFG-----VLPRQLPDYWGLAGISSSKVPGVAGIGPKSATQLLIQFQNLEGIYAHLDEV-PEKWRKKLETHKEMAFLCRDIARLQTDL 238          
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_SALPA (Uncharacterized exonuclease xni OS=Salmonella paratyphi A GN=xni PE=3 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1
Query:    1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519
            P PD +   +  L+A+ +   V+     G EADD+  TLA++  +AG +  +VS DK + Q+LSP LR+     + +  A F  ++F      + P Q  D   L G  +  +PGV GIG   A QL+ +F +LE +   +D+V  E+ RK L T  + A L +++A L+ DL
Sbjct:   72 PMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFG-----VLPRQLPDYWGLAGISSSKVPGVAGIGPKSATQLLIQFQNLEGIYAHLDEV-PEKWRKKLETHKEMAFLCRDIARLQTDL 238          
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_SALHS (Uncharacterized exonuclease xni OS=Salmonella heidelberg (strain SL476) GN=xni PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1
Query:    1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519
            P PD +   +  L+A+ +   V+     G EADD+  TLA++  +AG +  +VS DK + Q+LSP LR+     + +  A F  ++F      + P Q  D   L G  +  +PGV GIG   A QL+ +F +LE +   +D+V  E+ RK L T  + A L +++A L+ DL
Sbjct:   72 PMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFG-----VLPRQLPDYWGLAGISSSKVPGVAGIGPKSATQLLIQFQNLEGIYAHLDEV-PEKWRKKLETHKEMAFLCRDIARLQTDL 238          
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_SALA4 (Uncharacterized exonuclease xni OS=Salmonella agona (strain SL483) GN=xni PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1
Query:    1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519
            P PD +   +  L+A+ +   V+     G EADD+  TLA++  +AG +  +VS DK + Q+LSP LR+     + +  A F  ++F      + P Q  D   L G  +  +PGV GIG   A QL+ +F +LE +   +D+V  E+ RK L T  + A L +++A L+ DL
Sbjct:   72 PMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFG-----VLPRQLPDYWGLAGISSSKVPGVAGIGPKSATQLLIQFQNLEGIYAHLDEV-PEKWRKKLETHKEMAFLCRDIARLQTDL 238          
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_ESCF3 (Uncharacterized exonuclease xni OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=xni PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 59/173 (34.10%), Postives = 92/173 (53.18%), Query Frame = 1
Query:    1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519
            P PD +   +  L+A+ +   V      G EADD+  TLAV+   AG +  +VS DK + Q+LSP+LR+     + +  A F  ++F      ++P Q  D   L G  +  +PGV GIG   A QL+ +F SLE + + +D V  E+ RK L    + A L +++A L+ D+
Sbjct:   72 PMPDELHNEMPTLRAAFEQRGVPCWSATGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFG-----VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLEMHKEMAFLCRDIARLQTDV 238          
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_ECOL5 (Uncharacterized exonuclease xni OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=xni PE=3 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 59/173 (34.10%), Postives = 92/173 (53.18%), Query Frame = 1
Query:    1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519
            P P+ +   +  L+A+ +   V      G EADD+  TLAV+   AG +  +VS DK + Q+LSP+LR+     + +  A F  ++F      ++P Q  D   L G  +  +PGV GIG   A QL+ +F SLE + + +D V  E+ RK L    + A L +++A L+ DL
Sbjct:   72 PMPEELHNEMPALRAAFEQRGVPCWSASGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFG-----VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLENHKEMAFLCRDIARLQTDL 238          
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_ECO27 (Uncharacterized exonuclease xni OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=xni PE=3 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18
Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1
Query:    1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519
            P P+ +   +  L+A+ +   V      G EADD+  TLAV+   AG +  +VS DK + Q+LSP+LR+     + +  A F  ++F      ++P Q  D   L G  +  +PGV GIG   A QL+ +F SLE + + ++ V  E+ RK L T  + A L +++A L+ DL
Sbjct:   72 PMPEELHDEMPALRAAFEQRGVPCWSASGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFG-----VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFKSLEGIYENLNAV-AEKWRKKLETHKEMAFLCRDIARLQTDL 238          
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_VIBHB (Uncharacterized exonuclease xni OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=xni PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18
Identity = 61/190 (32.11%), Postives = 96/190 (50.53%), Query Frame = 1
Query:    1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDLPFYMVPFTTGDIAFEKP 570
            P P+ +++GL  L+ +     +  +   G EADD++ TLA +    G KV +VS DK + Q+LSP+L++     R +    +  E F  K   +KPSQ  D   L G  +  +PGV G+G   A +++T+F  +E      + V   + RK L    + A L K +A L+CD+    + F   DI F  P
Sbjct:   77 PMPEPLIKGLDALQQAWWEQGIDSLLSEGDEADDLVATLATKVASHGEKVTIVSTDKGYCQLLSPTLQI-----RDYFQHRWLDEPFIEKEFGVKPSQLADYWGLTGISSSQVPGVPGVGPKAAKEILTQFEDIEAAYASEELV--PKYRKKLDEHIESARLCKRVAALKCDID---LGFNLQDIRFTGP 256          
The following BLAST results are available for this feature:
BLAST of FC925495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
XNI_SALTY1.563e-1834.10Uncharacterized exonuclease xni OS=Salmonella typh... [more]
XNI_SALPK1.563e-1834.10Uncharacterized exonuclease xni OS=Salmonella para... [more]
XNI_SALPB1.563e-1834.10Uncharacterized exonuclease xni OS=Salmonella para... [more]
XNI_SALPA1.563e-1834.10Uncharacterized exonuclease xni OS=Salmonella para... [more]
XNI_SALHS1.563e-1834.10Uncharacterized exonuclease xni OS=Salmonella heid... [more]
XNI_SALA41.563e-1834.10Uncharacterized exonuclease xni OS=Salmonella agon... [more]
XNI_ESCF31.563e-1834.10Uncharacterized exonuclease xni OS=Escherichia fer... [more]
XNI_ECOL51.563e-1834.10Uncharacterized exonuclease xni OS=Escherichia col... [more]
XNI_ECO271.563e-1834.10Uncharacterized exonuclease xni OS=Escherichia col... [more]
XNI_VIBHB2.041e-1832.11Uncharacterized exonuclease xni OS=Vibrio harveyi ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YJ04FM1 TF Citrus clementina cDNA clone KN0AAP3YJ04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925495 ID=FC925495; Name=FC925495; organism=Citrus clementina; type=EST; length=736bp
CCTACACCTGATACTATAGTTCAGGGGCTTCAATATTTGAAAGCATCCAT
CAAGGCTATGTCCGTTAAGGTGATTGAGGTACCTGGTGTGGAAGCTGACG
ATGTGATTGGGACATTGGCTGTGAGGAGTGTTGATGCTGGGTTCAAGGTA
CGAGTTGTCTCCCCAGATAAAGACTTCTTTCAGATTCTCTCGCCTTCATT
ACGTCTTCTACGGATTGCACCCCGTGGATTTGACATGGCTTCATTTGGGA
TGGAGGATTTTGCTAGAAAGTATGGAGAACTGAAACCTTCGCAGTTTGTC
GATGTGATTTCTCTTGTGGGTGACAAAGCTGATAATATTCCAGGAGTTGA
AGGGATTGGAGACGTTCGTGCGGTGCAACTCATTACAAAATTTGGATCGT
TGGAGAATTTGTTGCAATGTGTTGATCAAGTTGAGGAGGAACGTACGAGA
AAGGCGTTGATGACTTTTGCTGATCAAGCTGTTCTAAGCAAGAACTTGGC
ATTACTACGCTGTGATCTTCCGTTCTACATGGTACCATTTACTACTGGAG
ATATTGCATTTGAAAAACCAAAGGATAATGGGGAGAAATTCACAAGCCTG
TTGACTGCCATAAGTGCCTATGCAGAGGGGTTTTCGGCCGATCCAATAAT
AAGGAGAGCCATATATTTGTGGAAAAAACTTGAAGCTCAGTGTTGAAATT
GTCTTACACACTCATACTCAATGAGCTGCCTAACCT
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