FC925495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_SALTY (Uncharacterized exonuclease xni OS=Salmonella typhimurium GN=xni PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18 Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519 P PD + + L+A+ + V+ G EADD+ TLA++ +AG + +VS DK + Q+LSP LR+ + + A F ++F + P Q D L G + +PGV GIG A QL+ +F +LE + +D+V E+ RK L T + A L +++A L+ DL Sbjct: 72 PMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFG-----VLPRQLPDYWGLAGISSSKVPGVAGIGPKSATQLLIQFQNLEGIYAHLDEV-PEKWRKKLETHKEMAFLCRDIARLQTDL 238
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_SALPK (Uncharacterized exonuclease xni OS=Salmonella paratyphi A (strain AKU_12601) GN=xni PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18 Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519 P PD + + L+A+ + V+ G EADD+ TLA++ +AG + +VS DK + Q+LSP LR+ + + A F ++F + P Q D L G + +PGV GIG A QL+ +F +LE + +D+V E+ RK L T + A L +++A L+ DL Sbjct: 72 PMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFG-----VLPRQLPDYWGLAGISSSKVPGVAGIGPKSATQLLIQFQNLEGIYAHLDEV-PEKWRKKLETHKEMAFLCRDIARLQTDL 238
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_SALPB (Uncharacterized exonuclease xni OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=xni PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18 Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519 P PD + + L+A+ + V+ G EADD+ TLA++ +AG + +VS DK + Q+LSP LR+ + + A F ++F + P Q D L G + +PGV GIG A QL+ +F +LE + +D+V E+ RK L T + A L +++A L+ DL Sbjct: 72 PMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFG-----VLPRQLPDYWGLAGISSSKVPGVAGIGPKSATQLLIQFQNLEGIYAHLDEV-PEKWRKKLETHKEMAFLCRDIARLQTDL 238
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_SALPA (Uncharacterized exonuclease xni OS=Salmonella paratyphi A GN=xni PE=3 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18 Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519 P PD + + L+A+ + V+ G EADD+ TLA++ +AG + +VS DK + Q+LSP LR+ + + A F ++F + P Q D L G + +PGV GIG A QL+ +F +LE + +D+V E+ RK L T + A L +++A L+ DL Sbjct: 72 PMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFG-----VLPRQLPDYWGLAGISSSKVPGVAGIGPKSATQLLIQFQNLEGIYAHLDEV-PEKWRKKLETHKEMAFLCRDIARLQTDL 238
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_SALHS (Uncharacterized exonuclease xni OS=Salmonella heidelberg (strain SL476) GN=xni PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18 Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519 P PD + + L+A+ + V+ G EADD+ TLA++ +AG + +VS DK + Q+LSP LR+ + + A F ++F + P Q D L G + +PGV GIG A QL+ +F +LE + +D+V E+ RK L T + A L +++A L+ DL Sbjct: 72 PMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFG-----VLPRQLPDYWGLAGISSSKVPGVAGIGPKSATQLLIQFQNLEGIYAHLDEV-PEKWRKKLETHKEMAFLCRDIARLQTDL 238
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_SALA4 (Uncharacterized exonuclease xni OS=Salmonella agona (strain SL483) GN=xni PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18 Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519 P PD + + L+A+ + V+ G EADD+ TLA++ +AG + +VS DK + Q+LSP LR+ + + A F ++F + P Q D L G + +PGV GIG A QL+ +F +LE + +D+V E+ RK L T + A L +++A L+ DL Sbjct: 72 PMPDDLHNEMPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAGHQATIVSTDKGYCQLLSPGLRIRDYFQKRWLDAPFIEKEFG-----VLPRQLPDYWGLAGISSSKVPGVAGIGPKSATQLLIQFQNLEGIYAHLDEV-PEKWRKKLETHKEMAFLCRDIARLQTDL 238
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_ESCF3 (Uncharacterized exonuclease xni OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=xni PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18 Identity = 59/173 (34.10%), Postives = 92/173 (53.18%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519 P PD + + L+A+ + V G EADD+ TLAV+ AG + +VS DK + Q+LSP+LR+ + + A F ++F ++P Q D L G + +PGV GIG A QL+ +F SLE + + +D V E+ RK L + A L +++A L+ D+ Sbjct: 72 PMPDELHNEMPTLRAAFEQRGVPCWSATGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFG-----VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLEMHKEMAFLCRDIARLQTDV 238
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_ECOL5 (Uncharacterized exonuclease xni OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=xni PE=3 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18 Identity = 59/173 (34.10%), Postives = 92/173 (53.18%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519 P P+ + + L+A+ + V G EADD+ TLAV+ AG + +VS DK + Q+LSP+LR+ + + A F ++F ++P Q D L G + +PGV GIG A QL+ +F SLE + + +D V E+ RK L + A L +++A L+ DL Sbjct: 72 PMPEELHNEMPALRAAFEQRGVPCWSASGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFG-----VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAV-AEKWRKKLENHKEMAFLCRDIARLQTDL 238
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_ECO27 (Uncharacterized exonuclease xni OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=xni PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18 Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDL 519 P P+ + + L+A+ + V G EADD+ TLAV+ AG + +VS DK + Q+LSP+LR+ + + A F ++F ++P Q D L G + +PGV GIG A QL+ +F SLE + + ++ V E+ RK L T + A L +++A L+ DL Sbjct: 72 PMPEELHDEMPALRAAFEQRGVPCWSASGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFG-----VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFKSLEGIYENLNAV-AEKWRKKLETHKEMAFLCRDIARLQTDL 238
BLAST of FC925495 vs. ExPASy Swiss-Prot
Match: XNI_VIBHB (Uncharacterized exonuclease xni OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=xni PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.041e-18 Identity = 61/190 (32.11%), Postives = 96/190 (50.53%), Query Frame = 1 Query: 1 PTPDTIVQGLQYLKASIKAMSVKVIEVPGVEADDVIGTLAVRSVDAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGFDMASFGMEDFARKYGELKPSQFVDVISLVGDKADNIPGVEGIGDVRAVQLITKFGSLENLLQCVDQVEEERTRKALMTFADQAVLSKNLALLRCDLPFYMVPFTTGDIAFEKP 570 P P+ +++GL L+ + + + G EADD++ TLA + G KV +VS DK + Q+LSP+L++ R + + E F K +KPSQ D L G + +PGV G+G A +++T+F +E + V + RK L + A L K +A L+CD+ + F DI F P Sbjct: 77 PMPEPLIKGLDALQQAWWEQGIDSLLSEGDEADDLVATLATKVASHGEKVTIVSTDKGYCQLLSPTLQI-----RDYFQHRWLDEPFIEKEFGVKPSQLADYWGLTGISSSQVPGVPGVGPKAAKEILTQFEDIEAAYASEELV--PKYRKKLDEHIESARLCKRVAALKCDID---LGFNLQDIRFTGP 256 The following BLAST results are available for this feature:
BLAST of FC925495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925495 ID=FC925495; Name=FC925495; organism=Citrus clementina; type=EST; length=736bpback to top |