FC925508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA4_PEA (Auxin-induced protein IAA4 OS=Pisum sativum GN=IAA4/5 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.892e-20 Identity = 61/171 (35.67%), Postives = 82/171 (47.95%), Query Frame = 3 Query: 51 VPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSAL 563 V +SS A A +VGWPPIRS+RKN HE FVK++MDG P RK+DL Y Y +L A++ +F+ + G +++E K EY YED +GD MLVGDVPW MFV++ RLR++K +E L Sbjct: 58 VESSSAAPPAKAKIVGWPPIRSYRKN--------------------------SLHEADVGGIFVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFKLTI---------GEYSEREGYKG--------SEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEAKGL 185
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA12_ORYSJ (Auxin-responsive protein IAA12 OS=Oryza sativa subsp. japonica GN=IAA12 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.892e-20 Identity = 60/174 (34.48%), Postives = 88/174 (50.57%), Query Frame = 3 Query: 78 APAPVVGWPPIRSFRKNL---AGASASKLPASESPNDVPSKTVDEKPAHEPGRKNP-------FVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSG--EYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSAL 563 A A VVGWPP+RS+RK+ A+ASK A+ S + + + + A P + VK++MDG P RK+DL Y Y +L A++ +F +G DG+ E+ + Y+D +GD MLVGDVP+ MF ST +LR++K SE + L Sbjct: 67 AKAQVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASSAAAANGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMF----------------------VCFSGAADGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGL 218
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.313e-19 Identity = 60/179 (33.52%), Postives = 87/179 (48.60%), Query Frame = 3 Query: 36 AKNTAVPNSSQKRTAPAP---VVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSAL 563 A + ++ + TA P +VGWPP+RS+RKN V K + G+ N +VK++MDG P RK+DL Y Y +L +++ +F+ V + E + G ++ YED +GD MLVGDVPW MFVS+ RLR++K SEV L Sbjct: 42 ATEKEIESTGKTETASPPKAQIVGWPPVRSYRKN---------------------NVQTKKSESEGQGN-YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFS------------VGEYFEREGYKG-----SDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.508e-19 Identity = 58/175 (33.14%), Postives = 86/175 (49.14%), Query Frame = 3 Query: 60 SSQKRTAPAP-----VVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAA--QRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSAL 563 SS ++T +P +VGWPP+RS+RKN ++ SK K E + +VK++MDG P RK+DL+ Y Y +L A++ +F+ + +RD G ++ YED +GD ML+GDVPW MF+ T RLR++K SE L Sbjct: 50 SSSRKTETSPPRKAQIVGWPPVRSYRKN----------------NIQSK----KNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDGYKGS-------------------DFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGL 185
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA14_ORYSJ (Auxin-responsive protein IAA14 OS=Oryza sativa subsp. japonica GN=IAA14 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18 Identity = 58/158 (36.71%), Postives = 82/158 (51.90%), Query Frame = 3 Query: 90 VVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNP----FVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSE 551 VVGWPP+ S+R++ +S+S A+ K E + GRKN +VK++MDG P RKVDL Y Y +L A+D LF G +A +SA + + YED +GD ML GDVPW MF+S+ +LR+++ SE Sbjct: 65 VVGWPPVGSYRRSTFQSSSSSTAAAAK-----GKGGGET---DQGRKNKGGGLYVKVSMDGAPYLRKVDLRMYGGYRELRDALDALF-GCFSADASASAA--------------------HFAVAYEDKDGDLMLAGDVPWDMFISSCKKLRIMRGSE 193
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: AX22B_PHAAU (Auxin-induced protein 22B OS=Phaseolus aureus GN=AUX22B PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18 Identity = 62/166 (37.35%), Postives = 80/166 (48.19%), Query Frame = 3 Query: 75 TAPAP---VVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSAL 563 +AP P +VGWPPIRS+RKN E D FVK++MDG P RKVDL Y Y +L A++ +F+ LA + + E + G EY YED +GD MLVGDVPW MFV++ RLR++K SE L Sbjct: 70 SAPPPKAKIVGWPPIRSYRKN---------SVQEGEGD-----------------GIFVKVSMDGAPYLRKVDLKVYGGYPELLKALETMFK--LA----------IGEYSEREGYKG-----SEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGSEARGL 192
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.407e-18 Identity = 66/196 (33.67%), Postives = 90/196 (45.92%), Query Frame = 3 Query: 12 IAFP-SSAPAKNTAVPNSSQKRTA-------PAP---VVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALS 566 +A P SS+ + +TA P + A P+P VGWPP+R++R+N E + VK+ +DG P RKVDL A+ Y L A+ +F LA + G K + +TG EY YED +GD MLVGDVPW MFV + R+R++KSSE LS Sbjct: 25 LALPGSSSSSSSTADPERKRAAHADHADAKPPSPKARAVGWPPVRAYRRNAL--------------------------REDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRGGGGGDGEGTKLVD--LVTGA-----EYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLS 187
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA1_ARATH (Auxin-responsive protein IAA1 OS=Arabidopsis thaliana GN=IAA1 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 3.575e-17 Identity = 60/180 (33.33%), Postives = 86/180 (47.78%), Query Frame = 3 Query: 24 SSAPAKNTAVPNSSQKRTAPAP----VVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSE 551 S + N N S + +AP P +VGWPP+RS RKN + S +VK++MDG P RK+DL Y +Y +L A++ +F+ + G +++E K GSG + YED +GD MLVGDVPW MF S+ +LR++K SE Sbjct: 30 SCVRSNNKRKNNDSTEESAPPPAKTQIVGWPPVRSNRKNNNNKNVS-----------------------------YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTV---------GEYSEREGYK-------GSG-FVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSE 163
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA19_ARATH (Auxin-responsive protein IAA19 OS=Arabidopsis thaliana GN=IAA19 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.358e-16 Identity = 54/162 (33.33%), Postives = 78/162 (48.15%), Query Frame = 3 Query: 78 APAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELF--RGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVS 557 A + VVGWPP+ S+RK + AS +VK++MDGVP RK+DL + Y+ L+ A+D+LF RG+ A +D + EY +YED +GD ML GDVPW MF+ + RLR++K S+ + Sbjct: 67 AKSQVVGWPPVCSYRKKNSCKEASTTKVGLG----------------------YVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGD--------------------NCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSDAT 186
BLAST of FC925508 vs. ExPASy Swiss-Prot
Match: IAA2_ARATH (Auxin-responsive protein IAA2 OS=Arabidopsis thaliana GN=IAA2 PE=2 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 3.026e-16 Identity = 55/158 (34.81%), Postives = 77/158 (48.73%), Query Frame = 3 Query: 90 VVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGLVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSAL 563 +VGWPP+RS RKN S +VK++MDG P RK+DL Y +Y +L A++ +F+ ++ G ++E K GSG + YED +GD MLVGDVPW MF S+ RLR++K S+ AL Sbjct: 61 IVGWPPVRSSRKNNNSVS-------------------------------YVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMI---------GEYCEREGYK-------GSG-FVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170 The following BLAST results are available for this feature:
BLAST of FC925508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925508 ID=FC925508; Name=FC925508; organism=Citrus clementina; type=EST; length=611bpback to top |