FC925509

Overview
NameFC925509
Unique NameFC925509
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.121e-47
Identity = 88/157 (56.05%), Postives = 115/157 (73.25%), Query Frame = 3
Query:  165 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQP 629
            F  ++  TW+  H +Q+ GG  +QL+LD+ +G GF SK  YLFG  SM IKL  GD+AG VTAFY++S T N  DE+DFEFLGNRTGQP  +QTN++  GKG+REQR+ LWFDP+  YH Y++LWN + IVF+VD++PIRV+KN+      FP NQP
Sbjct:   34 FGRNYVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSS-TNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQP 189          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.044e-46
Identity = 89/157 (56.69%), Postives = 111/157 (70.70%), Query Frame = 3
Query:  165 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQP 629
            F  ++  TW+  H++   GG  IQL LD+ +G GF +K  YLFG  SM IK+VPGDSAGTVTAF ++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN + IVF VD++PIRV+KN       FP NQP
Sbjct:   32 FGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQP 187          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.326e-46
Identity = 88/157 (56.05%), Postives = 113/157 (71.97%), Query Frame = 3
Query:  165 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQP 629
            F  ++  TW+  H +Q  GG  +QL+LD+ +G GF SK  YLFG  SM IKL  GD+AG VTAFY++S T N  DE+DFEFLGNRTGQP  +QTN++  GKG+REQR+ LWFDP+  YH Y+ILWN + IVF+VD++PIR +KN+      FP NQP
Sbjct:   35 FGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSS-TNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQP 190          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.967e-46
Identity = 83/159 (52.20%), Postives = 115/159 (72.33%), Query Frame = 3
Query:  159 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQP 629
            + F ++F +TW D   +   GG  + L LDQ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFLGN TG+PY + TN++A GKGDREQ+  LWFDP  ++H Y+I+W   HI+F VD++PIRV+ N+ +   PFP +QP
Sbjct:   26 SNFFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGAT-HDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQP 183          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 6.767e-46
Identity = 83/157 (52.87%), Postives = 111/157 (70.70%), Query Frame = 3
Query:  165 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQP 629
            F E F +TW +      E G+ +   LD+ SG GF SK++YLFG++ MK+KLV G+SAGTVTA+Y++S      DE+DFEFLGNRTG PYT+ TN++  GKGDRE +  LWFDP AD+H YT+ WN  +I+F VD +PIRV+KN+ +    +P NQP
Sbjct:   30 FYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKG-TAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQP 185          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 8.838e-46
Identity = 87/157 (55.41%), Postives = 112/157 (71.34%), Query Frame = 3
Query:  165 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQP 629
            F +DF VTWS  H+     GR+  L LDQ SG  F+S + +LFG++ MKIKL+ G S GTV A+YM+S+  N RDE+DFEFLGN  GQPY +QTN+YA G  +RE+R++LWFDPA D+H Y+ILWN H IVF VD +PIR+Y+N G     +P  QP
Sbjct:   37 FNKDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSDQPN-RDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQP 192          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.154e-45
Identity = 83/158 (52.53%), Postives = 112/158 (70.89%), Query Frame = 3
Query:  162 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQP 629
            +F + F +TW        E G+ +   LD+ SG GF SK++YLFG++ MKIKLVPG+SAGTVTA+Y++S  E   DE+DFEFLGN TGQPY + TN++  GKG+RE +  LWFDP AD+H YT+LWN  +I+F VD +PIRV+KN  +    +P +QP
Sbjct:   26 SFYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKGETW-DEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQP 182          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 1.969e-45
Identity = 82/158 (51.90%), Postives = 116/158 (73.42%), Query Frame = 3
Query:  162 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQP 629
            +F E+F +TW +   +   GG+ + L LD+ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFLGN TG+PY + TN++A GKG+REQ+  LWFDP  ++H Y+++W   HI+F VD+VPIRV+ N+ +   PFP NQP
Sbjct:   26 SFNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPT-HDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQP 182          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.276e-44
Identity = 81/158 (51.27%), Postives = 114/158 (72.15%), Query Frame = 3
Query:  162 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQP 629
            +F ++F +TW +     +E G+ +   LD+ SG GF SK++YLFG++ MK+KLV G+SAGTVTA+Y++S  E   DE+DFEFLGN TGQPY + TN++  GKG+RE +  LWFDP AD+H YT+LWN  +I+F VD +PIRV+KN  +    +P +QP
Sbjct:   25 SFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGETW-DEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQP 181          
BLAST of FC925509 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.667e-44
Identity = 82/158 (51.90%), Postives = 112/158 (70.89%), Query Frame = 3
Query:  162 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQP 629
            +F +DF +TW     +   GG+ + L LD+ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFLGN +G PY + TNI+  GKG+REQ+  LWFDP  ++H Y+I+W   HI+F VD+ PIRV+KN+     PFP NQP
Sbjct:   31 SFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPT-HDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQP 187          
The following BLAST results are available for this feature:
BLAST of FC925509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH_BRAOB6.121e-4756.05Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTHB_PHAAN1.044e-4656.69Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH4_ARATH2.326e-4656.05Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH15_ARATH3.967e-4652.20Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH14_ARATH6.767e-4652.87Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH10_ARATH8.838e-4655.41Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH1.154e-4552.53Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH1.969e-4551.90Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH13_ARATH1.276e-4451.27Putative xyloglucan endotransglucosylase/hydrolase... [more]
BRU1_SOYBN1.667e-4451.90Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YF20FM1 TF Citrus clementina cDNA clone KN0AAP11YF20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925509 ID=FC925509; Name=FC925509; organism=Citrus clementina; type=EST; length=640bp
TAACCACAACATTTTATTAAAGTTCTCTTTCTAATTAGTAACAGATAATA
TTTTATTGTACGGCTTGTTTTACAGCTATGGCTATCCTAAGAAATGCAAT
AGCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCTCTTGCGTTTTAG
GGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACATGGTCCGATGCC
CATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTTCTAGACCA
AAATTCAGGATGTGGGTTTGCTTCCAAAAGGCAGTACTTGTTCGGGCGTG
TAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCTGCTGGAACTGTCACT
GCATTTTATATGAATTCCAACACCGAAAATGTGAGAGACGAGCTTGATTT
TGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACGGTCCAGACCAATA
TCTATGCAAATGGAAAAGGCGATAGAGAACAGAGAGTGAACCTCTGGTTT
GACCCTGCTGCAGATTATCACCTTTACACTATTCTCTGGAACCATCACCA
TATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTTACAAAAACAGTG
GAAGGGCTCCATTTCCAATGAACCAACCCCATGGGGGTGT
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