FC925525
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925525 vs. ExPASy Swiss-Prot
Match: PATA2_SOLTU (Patatin group A-2 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.575e-39 Identity = 86/187 (45.99%), Postives = 114/187 (60.96%), Query Frame = 2 Query: 41 ITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLET 598 +TVLS L FLE +LQ++D + AR+ADYFDV+ GTSTGGL+T M+T PN+ PF+AA +I FY EHGP IF + F GPKYDGKYL ++ E LG+ V + LT V I +FDIK +PVIF+ ++ ++ +A++ DIC S +AAPTYFPPHY T Sbjct: 29 VTVLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSAAAAPTYFPPHYFAT 202
BLAST of FC925525 vs. ExPASy Swiss-Prot
Match: PATD3_SOLTU (Patatin group D-3 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.638e-38 Identity = 85/187 (45.45%), Postives = 115/187 (61.50%), Query Frame = 2 Query: 41 ITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLET 598 +TVLS L FLE +LQ++D + AR+ADYFDV+ GTSTGGL+T+M+T PN+ PF+AA +I F+ EHGP IF + F GPKYDGKYL ++ E LG+ V + LT V I + DIK +PVIF+ ++ ++ +A++ DIC ST+AAPTYFPPHY T Sbjct: 29 VTVLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTSMITTPNENNRPFAAANEIVPFFFEHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQENLGETRVHQALTEVAISSLDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFTT 202
BLAST of FC925525 vs. ExPASy Swiss-Prot
Match: PAT12_SOLTU (Patatin-12 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 4.819e-38 Identity = 85/187 (45.45%), Postives = 113/187 (60.43%), Query Frame = 2 Query: 41 ITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLET 598 +TVLS L FL +LQ++D + AR+ADYFDV+ GTSTGGL+T M+T PN+ PF+AA +I FY EHGP IF + F GPKYDGKYL ++ E LG+ V + LT V I +FDIK +PVIF+ ++ ++ +A++ DIC ST+AAP YFPPHY T Sbjct: 29 VTVLSIDGGGIKGIIPGTILEFLGGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFF-------------GPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFIT 202 HSP 2 Score: 21.1718 bits (43), Expect = 4.819e-38 Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 3 Query: 606 SDSGRTRTFDLVDGGVA 656 + +G F+LVDGGVA Sbjct: 204 TSNGDIYEFNLVDGGVA 220
BLAST of FC925525 vs. ExPASy Swiss-Prot
Match: PAT16_SOLTU (Patatin-16 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.806e-37 Identity = 85/187 (45.45%), Postives = 113/187 (60.43%), Query Frame = 2 Query: 41 ITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYFPPHYLET 598 +TVLS L FLE +LQ++D + AR+ADYFDV+ GTSTGGL+T M+T PN+ PF+AA +I FY EHGP IF + F KYDGKYL ++ E LG+ V + LT V I +FDIK +PVIF+ ++ ++ +A++ DIC ST+AAPTYFPPHY T Sbjct: 29 VTVLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFFR--------------KYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFAT 201 The following BLAST results are available for this feature:
BLAST of FC925525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925525 ID=FC925525; Name=FC925525; organism=Citrus clementina; type=EST; length=701bpback to top |