FC925530

Overview
NameFC925530
Unique NameFC925530
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length786
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GLIP5_ARATH (GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.422e-12
Identity = 63/209 (30.14%), Postives = 97/209 (46.41%), Query Frame = 2
Query:  107 AIYNFGDSNSDTGG-----ISAAFEPIRAPHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYLNSLGTNFR-HGANFATGGSTIGKPNETIYEYGISPFFLGMQI---TQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGF--RKMSFDQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLP 700
            A++ FGDS  D G       +   +    P+G+ FF  P GR SDGRLI DFIAE   LP +  +L    +  + +G NFA+ G+  G   ET         F G  I   TQ + +K + + L+      ++  K   ++  ++A+Y   IG ND S  F   +     +   +  ++  L + +  IY+ GGR F   N   +GC P
Sbjct:   48 ALFLFGDSFLDAGNNNYINTTTLDQANFPPYGQTFFGLPTGRFSDGRLISDFIAEYANLPLIPPFLEPGNSQKKLYGVNFASAGA--GALVET---------FQGSVINLRTQLDHYK-KVERLW-----RTNFGKEESKKRISRAVYLISIGSNDYSSIFLTNQSLPISMSQHVDIVIGNLTTFIHEIYKIGGRKFGFLNVPDLGCFP 239          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GDL1_CARPA (GDSL esterase/lipase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.168e-12
Identity = 62/210 (29.52%), Postives = 91/210 (43.33%), Query Frame = 2
Query:   95 CEFPAIYNFGDSNSDTGGISAAFEPIRA---PHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYLNSLGTNFRHGANFATGGSTI-GKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGFRKMSFD----QLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLP 700
            C    ++ FGDS  D G        + +   P+G      P GR SDGR++ DFIAE + +P+    L+    NF  G  FAT  +TI G P +T+         LG Q+  F Q K+   +   +                 K +Y F IG ND  + +   + +    Q  A +  ++ +L   +  IY  GGR F   N  P+GCLP
Sbjct:   24 CNAQQLFIFGDSLYDNGNKPFLATDVPSTFWPYGLSIDF-PNGRWSDGRIVPDFIAEFLGIPFPPPVLDR-SANFSSGVTFATADATILGTPPQTLT--------LGDQVKAFAQIKSTWTDAQRQ-----------------KGIYMFYIGANDY-LNYTNANLNATAQQQEAFVSQVIAKLKDQLLAIYGLGGRKFAFQNLAPLGCLP 205          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GDL78_ARATH (GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana GN=At5g22810 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.057e-12
Identity = 67/238 (28.15%), Postives = 102/238 (42.86%), Query Frame = 2
Query:  104 PAIYNFGDSNSDTGGISAAFEPIRA---PHGEGFF-HKPAGRDSDGRLIIDFIAESVKLP-YLSAYLN--SLGTNFRHGANFATGGSTIGKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGFR---KMSFDQLRAAIPDI-VNQLASAVQNIYQQGGRAFWIHNTGPIGCLPTNFFYNHNPPPGFLDEHGCVKDQNNMAV 784
            PAI+ FGDS  D G  +  +  ++A   P+G  F  H P GR  +G+L  DF AE++    Y  AYL+  + G N   GANFA+  S        +Y    S   L  Q+  +  + +R +E      IA+  +        +  +Y    G +D    +     +  DQ      D+ +   +S +QN+Y  G R   +    P+GCLP        P  G     GC +  NN A+
Sbjct:   19 PAIFIFGDSVVDVGNNNDIYTIVKANFPPYGRDFTTHTPTGRFCNGKLATDFTAENLGFKSYPQAYLSKKAKGKNLLIGANFASAASGYYDGTAKLY----SAISLPQQLEHYKDYISRIQE------IATSNNNSNASAIISNGIYIVSAGSSDFIQNYYINPLLYRDQSPDEFSDLLILSYSSFIQNLYSLGARRIGVTTLPPLGCLPAAITV-VGPHEG-----GCSEKLNNDAI 240          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GDL66_ARATH (GDSL esterase/lipase At4g26790 OS=Arabidopsis thaliana GN=At4g26790 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.057e-12
Identity = 66/224 (29.46%), Postives = 100/224 (44.64%), Query Frame = 2
Query:   98 EFPAIYNFGDSNSDTGG---ISAAFEPIRAPHGEGFFH-KPAGRDSDGRLIIDFIAESVKLPY-LSAYLNSLGT--NFRHGANFATGGSTIGKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGF-------RKMSFDQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLP----TNFFY 715
            +FPA+  FGDS  D+G    IS   +    P+G  +F  K  GR S+GR+  DFI+E + L   + AYL+      +F  G  FA+ G+  G  N T     + P  L  ++  + +++ R +    E K           E  +++LY   IG ND    +       RK S ++ +  +  I    A  V +IY+ G R   +    P GCLP    T  FY
Sbjct:   26 KFPALIVFGDSTVDSGNNNQISTVLKSNFQPYGRDYFDGKATGRFSNGRIAPDFISEGLGLKNAVPAYLDPAYNIADFATGVCFASAGT--GLDNATSAVLSVMP--LWKEVEYYKEYQTRLRSYLGEEKA---------NEIISESLYLISIGTNDFLENYYLLPRKLRKYSVNEYQYFLIGIA---ADFVTDIYRLGARKMSLSGLSPFGCLPLERTTQLFY 233          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GDL47_ARATH (GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana GN=At2g40250 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.057e-12
Identity = 71/254 (27.95%), Postives = 106/254 (41.73%), Query Frame = 2
Query:   59 LGVSGVTNKLPPCEFPAIYNFGDSNSDTGG---ISAAFEPIRAPHGEGFFHK-PAGRDSDGRLIIDFIAESVKL-PYLSAYLNSL--GTNFRHGANFATGGSTI----GKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGFRKMSFDQLRAAIPDIVNQLASAV----QNIYQQGGRAFWIHNTGPIGCLPTNFFYNHNPPPGFLDEHGCVKDQNN 775
            L +  +TN  P     A+Y FGDS  D+G    I   F+    P+G+ F  K   GR SDG+L  DFI  S+ L P L AYLN      +   G +FA+ G  +     K + TI         +  Q + F +   + K L  +    S+T+++ +      A++    G ND+           L  ++ D  + L + V    Q +Y+ G R   I    PIGCLP          P       C + QN+
Sbjct:   20 LQLLNLTNASPSPPITALYAFGDSTVDSGNNNYIPTLFQSNHPPYGKSFPSKLSTGRFSDGKLATDFIVSSLGLKPTLPAYLNPSVKPVDLLTGVSFASAGGGLDDRTAKSSLTIT--------MDKQWSYFEEALGKMKSLVGD----SETNRVIKN-----AVFVISAGTNDMIFNVYDHVLGSL-ISVSDYQDSLLTKVEVFVQRLYEAGARRITIAGLPPIGCLPVQVTLTSINTPRIFHHRICTEHQND 255          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.572e-11
Identity = 66/223 (29.60%), Postives = 102/223 (45.74%), Query Frame = 2
Query:   74 VTNKLPPCEFPAIYNFGDSNSDTGGISAAFEPIRA---PHGEGF-FHKPAGRDSDGRLIIDFIAESV----KLPYLSAYLNSLGTNFRHGANFATGGSTIGKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGFRKMSFD--QLRAAIPD----IVNQLASAVQNIYQQGGRAFWIHNTGPIGCLP 700
            VT   P  +  A + FGDS  D G         RA   P+G  +   +P GR S+G  I D I+E++     LPYLS +L   G N   GANFA+ G  IG  N+T  ++ ++   +  Q+  F Q++ R   L         T +L  Q     AL    +G ND    +  + F     + A+PD    ++++    ++ +Y+ G R   +  TG +GC P
Sbjct:   18 VTFLAPQVKSRAFFVFGDSLVDNGNNDYLVTTARADNYPYGIDYPTRRPTGRFSNGLNIPDIISEAIGMPSTLPYLSPHLT--GENLLVGANFASAG--IGILNDTGIQF-VNIIRISKQMEYFEQYQLRVSALIG----PEATQQLVNQ-----ALVLITLGGNDFVNNYYLIPFSARSRQYALPDYVVYLISEYGKILRKLYELGARRVLVTGTGAMGCAP 226          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GDL20_ARATH (GDSL esterase/lipase At1g54020 OS=Arabidopsis thaliana GN=At1g54020 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.572e-11
Identity = 56/206 (27.18%), Postives = 91/206 (44.17%), Query Frame = 2
Query:  110 IYNFGDSNSDTGG----ISAAFEPIRAPHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYLNSLGTNFRHGANFATGGSTI-GKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGFRKMS----FDQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLP 700
            ++ FGDSN D G      SA       P+G+     P G+ SDG+++ DFIA+ + +P+        GT+   GA+FA G ++I G P +++         L  Q+ +FNQ  +  K  Y +                 K+++   IG  D    F K +        +A +  + N+  S +  +Y  G   F +H   P+GCLP
Sbjct:   34 LFTFGDSNFDAGNKKFLTSAPLPQNFWPYGKSR-DDPKGKFSDGKIVPDFIAKFMGIPHDLPPALKPGTDVSRGASFAVGSASILGSPKDSLA--------LNQQVRKFNQMISNWKVDYIQ-----------------KSVFMISIGMEDY-YNFTKNNPNAEVSAQQAFVTSVTNRFKSDINLLYSSGASKFVVHLLAPLGCLP 212          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GLIP3_ARATH (GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=GLIP3 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.574e-11
Identity = 62/214 (28.97%), Postives = 93/214 (43.46%), Query Frame = 2
Query:  107 AIYNFGDSNSDTGGIS-----AAFEPIRAPHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYL--NSLGTNFRHGANFATGGSTIGKPNETIYEYGISPFFLGMQI---TQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGFRKMSF----DQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLPTN 706
            A++ FGDS  D G  +     ++F     P+G+  F  P GR SDG        E   LP +   L  N+    F +G +FA+ G+             ++  FLGM I   TQ N FK   K L  E   A +T ++     F++A+Y F IG ND    F   S     +     +  ++  +   ++ +Y+ GGR F   N GP  C P +
Sbjct:   35 ALFVFGDSLFDAGNNNYINTVSSFRSNIWPYGQTNFKFPTGRLSDG-------PEKAWLPSIPPNLQPNNGNNQFTYGVSFASAGAG-----------ALAESFLGMVINLGTQLNNFKDVEKSLRSELGDA-ETKRV-----FSRAVYLFHIGANDYFYPFSANSSTFKSNSKEKFVDFVIGNITFVIEEVYKMGGRKFGFLNVGPYECSPNS 224          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GDL79_ARATH (GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.574e-11
Identity = 68/230 (29.57%), Postives = 105/230 (45.65%), Query Frame = 2
Query:   56 GLGVSGVTNKL-PPCEFPAIYNFGDSNSDTGGISAAFEPIRA---PHGEGF-FHKPAGRDSDGRLIIDFIAESV----KLPYLSAYLNSLGTNFRHGANFATGGSTIGKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGFRKMSFD--QLRAAIPD----IVNQLASAVQNIYQQGGRAFWIHNTGPIGCLP 700
            G  +  VT+ L P     A   FGDS  D G         RA   P+G  F  H+P GR S+G  I D I+E +     +PYLS  L         GANFA+ G  IG  N+T  ++ ++   +  Q+  F Q+K R   L  E       +++ R  + A  L T  +G ND    +  + F     + ++PD    ++++    ++ +Y  G R   +  TGP+GC+P
Sbjct:   12 GFCILQVTSLLVPQANARAFLVFGDSLVDNGNNDFLATTARADNYPYGIDFPTHRPTGRFSNGLNIPDLISEHLGQESPMPYLSPMLKK--DKLLRGANFASAG--IGILNDTGIQF-LNIIRITKQLEYFEQYKVRVSGLVGE-------EEMNRLVNGALVLIT--LGGNDFVNNYYLVPFSARSRQFSLPDYVVFVISEYRKVLRKMYDLGARRVLVTGTGPMGCVP 227          
BLAST of FC925530 vs. ExPASy Swiss-Prot
Match: GDL21_ARATH (GDSL esterase/lipase At1g54030 OS=Arabidopsis thaliana GN=At1g54030 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.974e-11
Identity = 55/210 (26.19%), Postives = 95/210 (45.24%), Query Frame = 2
Query:  110 IYNFGDSNSDTGG--------ISAAFEPIRAPHGEGFFHKPAGRDSDGRLIIDFIAESVKLPYLSAYLNSLGTNFRHGANFATGGSTI-GKPNETIYEYGISPFFLGMQITQFNQFKARTKELYDEAKIASDTDKLPRQEDFAKALYTFDIGQNDLSVGFRKM----SFDQLRAAIPDIVNQLASAVQNIYQQGGRAFWIHNTGPIGCLP 700
            ++ FGD   D G         + A+F P     G+       GR SDG ++ D++A+ + +P +S  L +   +F HGANFA   +T+ G P ET+         L  Q+ +F++ K +                    +  ++A+Y   IG +D  + + K     S  Q +A +  ++  + + ++ +Y  GGR F   N  P+GCLP
Sbjct:   53 LFVFGDGLYDAGNKQFLSQNRVDASFPPYGVTVGQA-----TGRWSDGSIVPDYLAKFMGIPKISPILLTTA-DFSHGANFAIADATVLGSPPETMT--------LSQQVKKFSENKNKWTN-----------------QTRSEAIYLIYIGSDDY-LSYAKSNPSPSDTQKQAFVDQVITTIKAEIKVVYGSGGRKFAFQNLAPLGCLP 230          
The following BLAST results are available for this feature:
BLAST of FC925530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
GLIP5_ARATH1.422e-1230.14GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=... [more]
GDL1_CARPA3.168e-1229.52GDSL esterase/lipase OS=Carica papaya PE=1 SV=1[more]
GDL78_ARATH7.057e-1228.15GDSL esterase/lipase At5g22810 OS=Arabidopsis thal... [more]
GDL66_ARATH7.057e-1229.46GDSL esterase/lipase At4g26790 OS=Arabidopsis thal... [more]
GDL47_ARATH7.057e-1227.95GDSL esterase/lipase At2g40250 OS=Arabidopsis thal... [more]
LTL1_ARATH1.572e-1129.60GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]
GDL20_ARATH1.572e-1127.18GDSL esterase/lipase At1g54020 OS=Arabidopsis thal... [more]
GLIP3_ARATH4.574e-1128.97GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=... [more]
GDL79_ARATH4.574e-1129.57GDSL esterase/lipase At5g33370 OS=Arabidopsis thal... [more]
GDL21_ARATH5.974e-1126.19GDSL esterase/lipase At1g54030 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YL05FM1 TF Citrus clementina cDNA clone KN0AAP8YL05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925530 ID=FC925530; Name=FC925530; organism=Citrus clementina; type=EST; length=786bp
GACAATGTTGTTTTGGAGAGCTTTGGTTGCTGGGTTTTTACTATTCACAT
GGGGCGGCTTGGGCGTGAGTGGTGTTACTAATAAATTGCCACCGTGTGAG
TTCCCTGCAATTTACAATTTTGGGGACTCAAATTCGGATACTGGTGGCAT
TTCAGCTGCATTTGAGCCAATTCGAGCTCCACATGGAGAGGGGTTCTTTC
ACAAGCCAGCTGGTAGAGATTCTGATGGTCGTCTCATCATAGACTTCATT
GCTGAGAGTGTGAAGTTGCCATACTTGAGTGCATATTTGAATTCACTGGG
AACAAATTTTCGGCATGGTGCTAATTTTGCCACTGGAGGATCAACCATTG
GAAAGCCTAATGAGACTATATACGAGTATGGAATTAGTCCTTTCTTTCTG
GGTATGCAGATTACGCAATTTAACCAATTCAAAGCACGAACCAAAGAGCT
GTACGATGAAGCCAAGATTGCCTCGGATACAGACAAGCTGCCGAGACAGG
AGGACTTTGCCAAGGCTCTTTACACGTTTGATATTGGACAAAATGATCTT
TCTGTTGGATTTAGAAAGATGAGTTTTGATCAACTTCGTGCAGCAATACC
CGACATTGTTAATCAGTTAGCTTCAGCTGTTCAAAATATATATCAACAAG
GAGGCAGGGCATTTTGGATACACAATACAGGGCCTATTGGTTGCTTGCCA
ACCAATTTTTTCTACAATCATAACCCACCACCAGGCTTTCTTGATGAGCA
TGGCTGCGTCAAGGATCAAAATAACATGGCTGTGGA
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