FC925533
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925533 vs. ExPASy Swiss-Prot
Match: SAR1_NEUCR (Small COPII coat GTPase sar-1 OS=Neurospora crassa GN=sar-1 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.285e-46 Identity = 105/188 (55.85%), Postives = 123/188 (65.43%), Query Frame = 1 Query: 67 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYPLGLTNFTTGKGKVNLVDSNVRPP*GIHVQHCPPKM--GYRKGI 624 M+L+ WFY IL++LGL K K+LFLGLDNAGKTTLLHMLK++R+ QPT HPTSEELS+G +KF FDLGGHQ ARR+W ER E+K E+DALLS E LA VPF++LGNKID P A SEDELR LGL TTGKG+V L +RP I V C M GY + I Sbjct: 1 MWLWSWFYDILSNLGLLNKHGKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELSVGNVKFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHERLPEAKAEIDALLSMEELAKVPFVVLGNKIDHPEAVSEDELRQRLGLWQ-TTGKGRVPL--EGIRP---IEVFMCSVVMRQGYGEAI 182
BLAST of FC925533 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 6.902e-46 Identity = 101/190 (53.16%), Postives = 121/190 (63.68%), Query Frame = 1 Query: 70 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYPLGLTNFTTGKGKVNLVDSNVRPP*GIHVQHCP--PKMGYRKG 621 F+FDW Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH ARRVW ER ESK ELD+L++DE++ANVP LILGNKID P A SE+ LR GL TTGKG V+L + N RP + V C + GY +G Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARP---LEVFMCSVLKRQGYGEG 189
BLAST of FC925533 vs. ExPASy Swiss-Prot
Match: SAR1A_MOUSE (GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 8.402e-46 Identity = 91/170 (53.53%), Postives = 111/170 (65.29%), Query Frame = 1 Query: 70 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYPLGLTNFTTGKGKVNLVDSNVRP 567 F+F+W Y +L LGL++K K++FLGLDNAGKTTLL MLKD+RL QH PT HPTSEEL+I + F FDLGGH+ ARRVW R ESK EL+AL++DE+++NVP LILGNKID A SE++LR GL TTGKG V L + N RP Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLQMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIKGLYGQTTGKGNVTLKELNARP 172 HSP 2 Score: 34.6538 bits (78), Expect = 8.402e-46 Identity = 14/26 (53.85%), Postives = 21/26 (80.77%), Query Frame = 2 Query: 566 PLEVFMCNIVPPKWVTGKGFKWLSQY 643 P+EVFMC+++ + G+GF+WLSQY Sbjct: 172 PMEVFMCSVLKRQGY-GEGFRWLSQY 196
BLAST of FC925533 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 9.015e-46 Identity = 101/190 (53.16%), Postives = 121/190 (63.68%), Query Frame = 1 Query: 70 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYPLGLTNFTTGKGKVNLVDSNVRPP*GIHVQHCP--PKMGYRKG 621 F+FDW Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH ARRVW ER ESK ELD+L++DE++ANVP LILGNKID P A SE+ LR GL TTGKG V+L + N RP + V C + GY +G Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARP---LEVFMCSVLKRQGYGEG 189
BLAST of FC925533 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.177e-45 Identity = 106/187 (56.68%), Postives = 122/187 (65.24%), Query Frame = 1 Query: 67 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYPLGLTNFTTGKGKVNLVDSNVRPP*GIHVQHCPP--KMGYRKG 621 MF+ +WFY LA LGL K AK+LFLGLDNAGKTTLLHMLK++RL QPT HPTSEEL+IG ++F FDLGGHQ ARR+W ER +ESK ELDALL+ E LA VPFLILGNKID P A SEDEL+ LGL TTGKG V+ +RP I V C + GY +G Sbjct: 1 MFIINWFYDALAMLGLVNKHAKMLFLGLDNAGKTTLLHMLKNDRLAVMQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQ-TTGKG-VSKPVPGIRP---IEVFMCSVVLRQGYGEG 182
BLAST of FC925533 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.177e-45 Identity = 101/190 (53.16%), Postives = 121/190 (63.68%), Query Frame = 1 Query: 70 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYPLGLTNFTTGKGKVNLVDSNVRPP*GIHVQHCP--PKMGYRKG 621 F+FDW Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH ARRVW ER ESK ELD+L++DE++ANVP LILGNKID P A SE+ LR GL TTGKG V+L + N RP + V C + GY +G Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARP---LEVFMCSVLKRQGYGEG 189
BLAST of FC925533 vs. ExPASy Swiss-Prot
Match: SAR1B_HUMAN (GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.177e-45 Identity = 100/190 (52.63%), Postives = 121/190 (63.68%), Query Frame = 1 Query: 70 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYPLGLTNFTTGKGKVNLVDSNVRPP*GIHVQHCP--PKMGYRKG 621 F+FDW Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH ARRVW ER ESK ELD+L++DE++ANVP LILGNKID P A SE+ LR GL TTGKG ++L + N RP + V C + GY +G Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSISLKELNARP---LEVFMCSVLKRQGYGEG 189
BLAST of FC925533 vs. ExPASy Swiss-Prot
Match: SAR1B_CRIGR (GTP-binding protein SAR1b OS=Cricetulus griseus GN=SAR1B PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.177e-45 Identity = 101/190 (53.16%), Postives = 121/190 (63.68%), Query Frame = 1 Query: 70 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYPLGLTNFTTGKGKVNLVDSNVRPP*GIHVQHCP--PKMGYRKG 621 F+FDW Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH ARRVW ER ESK ELD+L++DE++ANVP LILGNKID P A SE+ LR GL TTGKG V+L + N RP + V C + GY +G Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARP---LEVFMCSVLKRQGYGEG 189
BLAST of FC925533 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.177e-45 Identity = 101/190 (53.16%), Postives = 121/190 (63.68%), Query Frame = 1 Query: 70 FLFDWFYG----ILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYPLGLTNFTTGKGKVNLVDSNVRPP*GIHVQHCP--PKMGYRKG 621 F+FDW Y +L LGL++K K++FLGLDNAGKTTLLHMLKD+RL QH PT HPTSEEL+I + F FDLGGH ARRVW ER ESK ELD+L++DE++ANVP LILGNKID P A SE+ LR GL TTGKG V+L + N RP + V C + GY +G Sbjct: 3 FIFDWIYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGNVSLKELNARP---LEVFMCSVLKRQGYGEG 189
BLAST of FC925533 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 2.426e-45 Identity = 93/156 (59.62%), Postives = 104/156 (66.67%), Query Frame = 1 Query: 73 LFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKRELDALLSDESLANVPFLILGNKIDIPYAASEDELRYPLGLTNFTTGKGKV 540 LF WF IL+SLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT HPTSEEL+IG IKF FDLGGH ARR+W ERF E++ ELDAL + L NVPF +LGNKID P A SE ELR LGL N TTG K+ Sbjct: 6 LFGWFRDILSSLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHLQARRLWKDYFPEVNGIVFLVDAADPERFNEARIELDALFQIKELDNVPFAVLGNKIDSPSAVSETELRAALGLMN-TTGYTKI 160 HSP 2 Score: 30.0314 bits (66), Expect = 2.426e-45 Identity = 13/26 (50.00%), Postives = 19/26 (73.08%), Query Frame = 2 Query: 566 PLEVFMCNIVPPKWVTGKGFKWLSQY 643 P+E+FMC++V K + FKWLS+Y Sbjct: 165 PIELFMCSVV-MKSGYSEAFKWLSEY 189 The following BLAST results are available for this feature:
BLAST of FC925533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925533 ID=FC925533; Name=FC925533; organism=Citrus clementina; type=EST; length=644bpback to top |