FC925542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925542 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 9.154e-31 Identity = 62/73 (84.93%), Postives = 65/73 (89.04%), Query Frame = 1 Query: 7 VLPSLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGA 225 VL LPIGFAVFMVHLATIPITGTGINPARSLG AV+YN +KAW DQW+FWVGPFIGAAIAA YHQ ILRA A Sbjct: 204 VLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQVILRASA 276
BLAST of FC925542 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.561e-30 Identity = 62/75 (82.67%), Postives = 66/75 (88.00%), Query Frame = 1 Query: 7 VLPSLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVK 231 VL LPIGFAVFMVHLATIPITGTGINPARSLGAAVIYN+ KAW D W+FWVGP IGAAIAA YHQ++LRA A K Sbjct: 207 VLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKAWHDHWIFWVGPLIGAAIAAAYHQYVLRASAAK 281
BLAST of FC925542 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 2.039e-30 Identity = 58/71 (81.69%), Postives = 65/71 (91.55%), Query Frame = 1 Query: 7 VLPSLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 219 +L LPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD AWDD W+FWVGPFIGAA+AA YHQ ++RA Sbjct: 210 ILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRA 280
BLAST of FC925542 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.039e-30 Identity = 58/71 (81.69%), Postives = 65/71 (91.55%), Query Frame = 1 Query: 7 VLPSLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 219 +L LPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD AWDD W+FWVGPFIGAA+AA YHQ ++RA Sbjct: 209 ILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRA 279
BLAST of FC925542 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 4.543e-30 Identity = 57/71 (80.28%), Postives = 65/71 (91.55%), Query Frame = 1 Query: 7 VLPSLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 219 +L LPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD +WDD W+FWVGPFIGAA+AA YHQ ++RA Sbjct: 210 ILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRA 280
BLAST of FC925542 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.012e-29 Identity = 57/71 (80.28%), Postives = 65/71 (91.55%), Query Frame = 1 Query: 7 VLPSLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 219 +L LPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD AW+D W+FWVGPF+GAA+AA YHQ I+RA Sbjct: 212 ILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRA 282
BLAST of FC925542 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.726e-29 Identity = 57/71 (80.28%), Postives = 65/71 (91.55%), Query Frame = 1 Query: 7 VLPSLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 219 +L LPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN+D AW+D W+FWVGPFIGAA+AA YHQ I+RA Sbjct: 212 ILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRA 282
BLAST of FC925542 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.255e-29 Identity = 57/71 (80.28%), Postives = 64/71 (90.14%), Query Frame = 1 Query: 7 VLPSLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 219 +L LPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN+D AW D W+FWVGPFIGAA+AA YHQ I+RA Sbjct: 215 ILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRA 285
BLAST of FC925542 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3) HSP 1 Score: 127.487 bits (319), Expect = 3.846e-29 Identity = 56/71 (78.87%), Postives = 64/71 (90.14%), Query Frame = 1 Query: 7 VLPSLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 219 +L LPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN+ AWDD W+FWVGPFIGAA+AA YHQ ++RA Sbjct: 211 ILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRA 281
BLAST of FC925542 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.846e-29 Identity = 56/71 (78.87%), Postives = 64/71 (90.14%), Query Frame = 1 Query: 7 VLPSLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 219 +L LPIGFAVF+VHLATIPITGTGINPARSLGAA+I+NKD AWDD W+FWVGPFIGAA+AA YH ++RA Sbjct: 209 ILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRA 279 The following BLAST results are available for this feature:
BLAST of FC925542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925542 ID=FC925542; Name=FC925542; organism=Citrus clementina; type=EST; length=527bpback to top |