FC925551

Overview
NameFC925551
Unique NameFC925551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_SYNY3 (Ribose-phosphate pyrophosphokinase OS=Synechocystis sp. (strain PCC 6803) GN=prs PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.227e-38
Identity = 71/100 (71.00%), Postives = 91/100 (91.00%), Query Frame = 3
Query:  435 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            NNR++LFSG++NP+LSQE+A Y+G+++G +  KRFADGE+Y+Q+QES+RG DVYL+QP C P N+NLMELLIMIDACRRASA+ ITAV+PY+GYARADRK
Sbjct:   22 NNRLRLFSGSSNPSLSQEVARYLGMDIGPMLRKRFADGELYIQIQESIRGGDVYLIQPCCHPVNDNLMELLIMIDACRRASARQITAVLPYYGYARADRK 121          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_PROMP (Ribose-phosphate pyrophosphokinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=prs PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.227e-38
Identity = 72/120 (60.00%), Postives = 96/120 (80.00%), Query Frame = 3
Query:  381 LPKFLETARMEKTVNRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDS 740
            +  F+     E+     TN+R++L SGT+NP L++EIA Y+G+E   +  KRFADGE+YVQ+Q+S+RGCDV+L+QPTC P N++LMEL+IM+DAC+RASA+ ITAVIPYFGYARADRK S
Sbjct:    1 MTSFITAVDNEEPTFNLTNSRLRLVSGTSNPKLAEEIASYLGIENVPLVSKRFADGELYVQIQQSIRGCDVFLIQPTCAPVNDSLMELMIMVDACKRASARQITAVIPYFGYARADRKTS 120          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_ANASP (Ribose-phosphate pyrophosphokinase OS=Anabaena sp. (strain PCC 7120) GN=prs PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.521e-38
Identity = 71/102 (69.61%), Postives = 91/102 (89.22%), Query Frame = 3
Query:  429 TTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            T N+R++LFSG++N  LSQE+A Y+G++LG +  KRFADGE+YVQ+QES+RGCDVYL+QP C P N++LMELLIM+DACRRASA+ +TAVIPY+GYARADRK
Sbjct:   17 TENHRLRLFSGSSNVQLSQEVARYLGMDLGPMIRKRFADGELYVQIQESIRGCDVYLIQPCCQPVNDHLMELLIMVDACRRASARQVTAVIPYYGYARADRK 118          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_PROMA (Ribose-phosphate pyrophosphokinase OS=Prochlorococcus marinus GN=prs PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.167e-36
Identity = 69/113 (61.06%), Postives = 94/113 (83.19%), Query Frame = 3
Query:  399 TARMEKTVNRTTN-NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            TA   + +  + N +R+KL SGT+NP L++EI+ Y+G+E   +  KRFADGE+YVQ+Q+S+RGCDV+L+QPTC P N++LMEL+IM+DAC+RASA+ +TAVIPYFGYARADRK
Sbjct:    2 TAATAQNIKSSLNTDRLKLISGTSNPILAKEISSYIGIEDVPVVSKRFADGELYVQIQQSIRGCDVFLIQPTCAPVNDSLMELMIMVDACKRASARQVTAVIPYFGYARADRK 114          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_GLOVI (Ribose-phosphate pyrophosphokinase OS=Gloeobacter violaceus GN=prs PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.749e-36
Identity = 72/117 (61.54%), Postives = 91/117 (77.78%), Query Frame = 3
Query:  384 PKFLETARMEKTVNRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            P  L      + V    + R++LFSG+ANP L+Q +A Y+G+  G +  K FADGE+YVQ+QES+RGCDVYLVQPTC P N++LMELLI+IDACRRASA+ ITAV+PY+GYARADRK
Sbjct:    4 PDLLPRRSTVQPVRLMGDERLRLFSGSANPELAQLVARYLGLAPGPLVRKSFADGELYVQIQESIRGCDVYLVQPTCSPVNDSLMELLILIDACRRASARQITAVLPYYGYARADRK 120          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_STAS1 (Ribose-phosphate pyrophosphokinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=prs PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.721e-32
Identity = 62/104 (59.62%), Postives = 83/104 (79.81%), Query Frame = 3
Query:  423 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            N   N+ +K+FS   N  L+QE+A ++G+ELGK ++KRF+DGEI + ++ES+RGCDV+++QPT  P N +LMELLIMIDACRRASA NI  V+PY+GYAR DRK
Sbjct:    4 NEYKNSALKIFSLKGNEPLAQEVADHVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSNPVNLHLMELLIMIDACRRASAANINIVVPYYGYARQDRK 107          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_STAES (Ribose-phosphate pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=prs PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.247e-31
Identity = 62/104 (59.62%), Postives = 83/104 (79.81%), Query Frame = 3
Query:  423 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            N   N+ +K+FS   N  L+QE+A ++G+ELGK ++KRF+DGEI + ++ES+RGCDV++VQPT  P N +LMELLIMIDAC+RASA NI  V+PY+GYAR DRK
Sbjct:    4 NEYKNSSMKIFSLKGNEPLAQEVADHVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIVQPTSYPVNLHLMELLIMIDACKRASAANINIVVPYYGYARQDRK 107          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_STAEQ (Ribose-phosphate pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=prs PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.247e-31
Identity = 62/104 (59.62%), Postives = 83/104 (79.81%), Query Frame = 3
Query:  423 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            N   N+ +K+FS   N  L+QE+A ++G+ELGK ++KRF+DGEI + ++ES+RGCDV++VQPT  P N +LMELLIMIDAC+RASA NI  V+PY+GYAR DRK
Sbjct:    4 NEYKNSSMKIFSLKGNEPLAQEVADHVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIVQPTSYPVNLHLMELLIMIDACKRASAANINIVVPYYGYARQDRK 107          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_STAHJ (Ribose-phosphate pyrophosphokinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=prs PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.005e-31
Identity = 61/104 (58.65%), Postives = 82/104 (78.85%), Query Frame = 3
Query:  423 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            N   N+ +K+FS   N  L+QE+A  +G+ELGK ++KRF+DGEI + ++ES+RGCDV+++QPT  P N +LMELLIMIDAC+RASA NI  V+PY+GYAR DRK
Sbjct:    4 NEYKNSSLKIFSLKGNEPLAQEVADRVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSNPVNLHLMELLIMIDACKRASAANINIVVPYYGYARQDRK 107          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_STAAW (Ribose-phosphate pyrophosphokinase OS=Staphylococcus aureus (strain MW2) GN=prs PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.536e-31
Identity = 61/104 (58.65%), Postives = 82/104 (78.85%), Query Frame = 3
Query:  423 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            N   N+ +K+FS   N AL+QE+A  +G+ELGK ++KRF+DGEI + ++ES+RGCDV+++QPT  P N +LMELLIMIDAC+RASA  I  V+PY+GYAR DRK
Sbjct:    4 NEYKNSSLKIFSLKGNEALAQEVADQVGIELGKCSVKRFSDGEIQINIEESIRGCDVFIIQPTSYPVNLHLMELLIMIDACKRASAATINIVVPYYGYARQDRK 107          
The following BLAST results are available for this feature:
BLAST of FC925551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
KPRS_SYNY34.227e-3871.00Ribose-phosphate pyrophosphokinase OS=Synechocysti... [more]
KPRS_PROMP4.227e-3860.00Ribose-phosphate pyrophosphokinase OS=Prochlorococ... [more]
KPRS_ANASP5.521e-3869.61Ribose-phosphate pyrophosphokinase OS=Anabaena sp.... [more]
KPRS_PROMA5.167e-3661.06Ribose-phosphate pyrophosphokinase OS=Prochlorococ... [more]
KPRS_GLOVI6.749e-3661.54Ribose-phosphate pyrophosphokinase OS=Gloeobacter ... [more]
KPRS_STAS17.721e-3259.62Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAES2.247e-3159.62Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAEQ2.247e-3159.62Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAHJ5.005e-3158.65Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]
KPRS_STAAW6.536e-3158.65Ribose-phosphate pyrophosphokinase OS=Staphylococc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YK03FM1 TF Citrus clementina cDNA clone KN0AAP3YK03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925551 ID=FC925551; Name=FC925551; organism=Citrus clementina; type=EST; length=764bp
GCAAAATAGCCATTGAAGAAGAAAAAGCAACCGAAGCTCTCTCTGCCTCC
TCACCGTCACCACAAAAACAAAAGGAAAGAAAGAAAGAGAGTGAGTGAGA
GAAAGAGAGATCAAAAGGAGAGAGAGCTGAAACAACACAACAGATAACAA
TGGCTTCGCTGACGATGCCGCGCCCTTCACAATCCACGTCAGCTTCTTGC
TCTTCGCCTATCCCCAGTCGCTGTTCTTTCGGTGACCAAAACCCAACTTT
TTCATTCAGTTTCAGGGACTCTCGCTCTCGGGTTCACGTCTGTAATGCCG
CCGCCGTTAGATGTGACATGGCTGAGGCATTGAATTTTCCAAATGGGAAG
CCTAATATTCCAGTTCTAAACGAACGGACGCTGCCCAAATTTTTGGAAAC
GGCGCGTATGGAGAAAACTGTCAACAGAACTACAAATAACAGGATCAAAT
TGTTCTCTGGCACCGCCAATCCTGCTCTTTCCCAGGAAATTGCTTGCTAC
ATGGGCGTGGAACTGGGAAAGATCAACATAAAGCGATTTGCTGATGGTGA
AATTTATGTTCAGCTGCAAGAGAGTGTTAGAGGATGTGATGTTTATTTGG
TGCAGCCCACCTGTCCTCCGGCAAATGAAAATCTCATGGAGCTTTTGATA
ATGATAGATGCGTGTCGGAGAGCGTCAGCCAAGAATATCACAGCTGTGAT
TCCTTACTTTGGATATGCTAGAGCTGACAGAAAAGACTCAAGGGCGAAAA
ATCATTGCTGCCAA
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