FC925551

Overview
NameFC925551
Unique NameFC925551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRA_BOVIN (Phosphoribosyl pyrophosphate synthetase-associated protein 1 OS=Bos taurus GN=PRPSAP1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.336e-12
Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 3
Query:  447 KLFSGTANPA---LSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAKNHC 758
            ++FS  +  A   L++ I   +G ELGK  + +  +GE  V++QESVRG D++++Q      N  +MELLIM  A + A A+NI  VIPYF Y++  +   R    C
Sbjct:    9 RVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIQESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVC 115          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_SULSO (Ribose-phosphate pyrophosphokinase OS=Sulfolobus solfataricus GN=prs PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.796e-12
Identity = 32/95 (33.68%), Postives = 58/95 (61.05%), Query Frame = 3
Query:  450 LFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            +  G+A   + + ++  + + L K+  K F DGE Y+++  S+R  +V LVQ T  P +++L+EL ++ +  R   AK +TA++PY  Y+R DR+
Sbjct:    3 IIGGSATNGIDESLSKILSIPLVKVENKIFPDGESYIRVPSSIRDEEVLLVQTTDYPQDKHLIELFLIAETIRDLGAKKLTAIVPYLAYSRQDRR 97          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRA_RAT (Phosphoribosyl pyrophosphate synthetase-associated protein 1 OS=Rattus norvegicus GN=Prpsap1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.796e-12
Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = 3
Query:  447 KLFSGTANPA---LSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAKNHC 758
            ++FS  +  A   L++ I   +G ELGK  + +  +GE  V+++ESVRG D++++Q      N  +MELLIM  A + A A+NI  VIPYF Y++  +   R    C
Sbjct:    9 RVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVC 115          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRA_MOUSE (Phosphoribosyl pyrophosphate synthetase-associated protein 1 OS=Mus musculus GN=Prpsap1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.796e-12
Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = 3
Query:  447 KLFSGTANPA---LSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAKNHC 758
            ++FS  +  A   L++ I   +G ELGK  + +  +GE  V+++ESVRG D++++Q      N  +MELLIM  A + A A+NI  VIPYF Y++  +   R    C
Sbjct:    9 RVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVC 115          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRA_HUMAN (Phosphoribosyl pyrophosphate synthetase-associated protein 1 OS=Homo sapiens GN=PRPSAP1 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.796e-12
Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = 3
Query:  447 KLFSGTANPA---LSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAKNHC 758
            ++FS  +  A   L++ I   +G ELGK  + +  +GE  V+++ESVRG D++++Q      N  +MELLIM  A + A A+NI  VIPYF Y++  +   R    C
Sbjct:    9 RVFSANSTAACTELAKRITERLGAELGKSVVYQETNGETRVEIKESVRGQDIFIIQTIPRDVNTAVMELLIMAYALKTACARNIIGVIPYFPYSKQSKMRKRGSIVC 115          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_METTH (Ribose-phosphate pyrophosphokinase OS=Methanobacterium thermoautotrophicum GN=prs PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.405e-11
Identity = 36/91 (39.56%), Postives = 56/91 (61.54%), Query Frame = 3
Query:  462 TANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            +A+  L+  +A  +   L  +  ++F DGE Y++++E V G +V +VQ T  P +ENLMELL MI+  +   A  + A IPYFGY R +R+
Sbjct:    6 SASQKLAASVADLLDEPLCPVETRKFPDGERYIRVKEEVEG-EVTVVQSTGYPQDENLMELLFMIENLKDLGADYVRAAIPYFGYGRQERR 95          
The following BLAST results are available for this feature:
BLAST of FC925551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
KPRA_BOVIN2.336e-1238.32Phosphoribosyl pyrophosphate synthetase-associated... [more]
KPRS_SULSO6.796e-1233.68Ribose-phosphate pyrophosphokinase OS=Sulfolobus s... [more]
KPRA_RAT6.796e-1237.38Phosphoribosyl pyrophosphate synthetase-associated... [more]
KPRA_MOUSE6.796e-1237.38Phosphoribosyl pyrophosphate synthetase-associated... [more]
KPRA_HUMAN6.796e-1237.38Phosphoribosyl pyrophosphate synthetase-associated... [more]
KPRS_METTH4.405e-1139.56Ribose-phosphate pyrophosphokinase OS=Methanobacte... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YK03FM1 TF Citrus clementina cDNA clone KN0AAP3YK03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925551 ID=FC925551; Name=FC925551; organism=Citrus clementina; type=EST; length=764bp
GCAAAATAGCCATTGAAGAAGAAAAAGCAACCGAAGCTCTCTCTGCCTCC
TCACCGTCACCACAAAAACAAAAGGAAAGAAAGAAAGAGAGTGAGTGAGA
GAAAGAGAGATCAAAAGGAGAGAGAGCTGAAACAACACAACAGATAACAA
TGGCTTCGCTGACGATGCCGCGCCCTTCACAATCCACGTCAGCTTCTTGC
TCTTCGCCTATCCCCAGTCGCTGTTCTTTCGGTGACCAAAACCCAACTTT
TTCATTCAGTTTCAGGGACTCTCGCTCTCGGGTTCACGTCTGTAATGCCG
CCGCCGTTAGATGTGACATGGCTGAGGCATTGAATTTTCCAAATGGGAAG
CCTAATATTCCAGTTCTAAACGAACGGACGCTGCCCAAATTTTTGGAAAC
GGCGCGTATGGAGAAAACTGTCAACAGAACTACAAATAACAGGATCAAAT
TGTTCTCTGGCACCGCCAATCCTGCTCTTTCCCAGGAAATTGCTTGCTAC
ATGGGCGTGGAACTGGGAAAGATCAACATAAAGCGATTTGCTGATGGTGA
AATTTATGTTCAGCTGCAAGAGAGTGTTAGAGGATGTGATGTTTATTTGG
TGCAGCCCACCTGTCCTCCGGCAAATGAAAATCTCATGGAGCTTTTGATA
ATGATAGATGCGTGTCGGAGAGCGTCAGCCAAGAATATCACAGCTGTGAT
TCCTTACTTTGGATATGCTAGAGCTGACAGAAAAGACTCAAGGGCGAAAA
ATCATTGCTGCCAA
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