FC925551

Overview
NameFC925551
Unique NameFC925551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_HELPY (Ribose-phosphate pyrophosphokinase OS=Helicobacter pylori GN=prs PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.684e-29
Identity = 57/96 (59.38%), Postives = 79/96 (82.29%), Query Frame = 3
Query:  447 KLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            K+FSG+A+PA  +E++ ++G  L K  I +F+DGEI +Q+ ESVRG D++++QPTC P N+NLMELL+M+DA RR+SA +ITAV+PYFGYAR DRK
Sbjct:   14 KIFSGSAHPAFGKEVSKHLGFPLSKAVIGKFSDGEINIQISESVRGKDIFIIQPTCVPVNDNLMELLVMVDALRRSSANSITAVLPYFGYARQDRK 109          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_BACSU (Ribose-phosphate pyrophosphokinase OS=Bacillus subtilis GN=prs PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.118e-29
Identity = 57/104 (54.81%), Postives = 81/104 (77.88%), Query Frame = 3
Query:  423 NRTTNNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            N+  +  +K+FS  +NP L++EIA  +GV+LGK ++ RF+DGE+ + ++ES+RGCD Y++Q T  P NE++MELLIM+DA +RASAK I  VIPY+GYAR DRK
Sbjct:    3 NQYGDKNLKIFSLNSNPELAKEIADIVGVQLGKCSVTRFSDGEVQINIEESIRGCDCYIIQSTSDPVNEHIMELLIMVDALKRASAKTINIVIPYYGYARQDRK 106          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_THEAB (Ribose-phosphate pyrophosphokinase OS=Thermosipho africanus (strain TCF52B) GN=prs PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28
Identity = 59/99 (59.60%), Postives = 76/99 (76.77%), Query Frame = 3
Query:  438 NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            N +K+FSG AN  L+ +++ Y+G  L    + RFADGEI V++ E+VRG D +++QPTCPP NENLMELLIMIDA +RASA +I  VIPY+GYAR DRK
Sbjct:    6 NEMKIFSGNANRELAIKVSEYIGTRLADCEVGRFADGEINVKIGETVRGHDTFIIQPTCPPVNENLMELLIMIDALKRASANSIAVVIPYYGYARQDRK 104          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_VIBPA (Ribose-phosphate pyrophosphokinase OS=Vibrio parahaemolyticus GN=prs PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.966e-28
Identity = 59/102 (57.84%), Postives = 78/102 (76.47%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAK 749
            +KLF+G A P L+Q IA  + + LG  ++ RF+DGE+ VQ+ E+VRG DV+++Q TC P N+NLMEL++MIDA RRASA  ITAVIPYFGYAR DR+   A+
Sbjct:    4 MKLFAGNATPELAQRIADRLYISLGDASVSRFSDGEVAVQINENVRGSDVFIIQSTCAPTNDNLMELVVMIDAMRRASAGRITAVIPYFGYARQDRRVRSAR 105          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_CLOPE (Ribose-phosphate pyrophosphokinase OS=Clostridium perfringens GN=prs PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.966e-28
Identity = 59/100 (59.00%), Postives = 77/100 (77.00%), Query Frame = 3
Query:  435 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            +  IK+F+G ++P L++EIA  + + LGK  +  F+DGEI V ++E+VRGCDV++VQ TC P N NLMELLIMIDA +RASA  I AVIPY+GYAR DRK
Sbjct:    5 SKNIKIFTGNSHPELAREIAKALNIPLGKAEVGTFSDGEISVNIKETVRGCDVFIVQSTCSPVNNNLMELLIMIDAFKRASAGRINAVIPYYGYARQDRK 104          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_VIBVY (Ribose-phosphate pyrophosphokinase OS=Vibrio vulnificus (strain YJ016) GN=prs PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28
Identity = 59/102 (57.84%), Postives = 77/102 (75.49%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAK 749
            +KLF+G A P L+Q IA  + + LG   + RF+DGE+ VQ+ E+VRG DV+++Q TC P N+NLMEL++MIDA RRASA  ITAVIPYFGYAR DR+   A+
Sbjct:    4 MKLFAGNATPELAQRIADRLYISLGDATVSRFSDGEVAVQINENVRGSDVFIIQSTCAPTNDNLMELVVMIDAMRRASAGRITAVIPYFGYARQDRRVRSAR 105          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_VIBVU (Ribose-phosphate pyrophosphokinase OS=Vibrio vulnificus GN=prs PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28
Identity = 59/102 (57.84%), Postives = 77/102 (75.49%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAK 749
            +KLF+G A P L+Q IA  + + LG   + RF+DGE+ VQ+ E+VRG DV+++Q TC P N+NLMEL++MIDA RRASA  ITAVIPYFGYAR DR+   A+
Sbjct:    4 MKLFAGNATPELAQRIADRLYISLGDATVSRFSDGEVAVQINENVRGSDVFIIQSTCAPTNDNLMELVVMIDAMRRASAGRITAVIPYFGYARQDRRVRSAR 105          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_RHOBA (Ribose-phosphate pyrophosphokinase OS=Rhodopirellula baltica GN=prs PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28
Identity = 58/98 (59.18%), Postives = 77/98 (78.57%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKD 737
            +K+FSG AN  L++++  ++ ++  +I + +F DGE Y +L E VRG DV+LVQPTCPP N+NL+ELL MID C+RASA+ ITAVIPYFGYAR DRKD
Sbjct:    4 LKIFSGRANHDLAEKLCRHLHLKPARITLGQFPDGENYCKLDEDVRGRDVFLVQPTCPPVNDNLIELLTMIDCCKRASAERITAVIPYFGYARQDRKD 101          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_HELHP (Ribose-phosphate pyrophosphokinase OS=Helicobacter hepaticus GN=prs PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.179e-28
Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 3
Query:  447 KLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            K+FSG+A+   S E+A  + + L K  I RF+DGEI VQ+ ESVRG D++++QPTC PAN++LMELLIM DA +R+ AKNI AVIPYFGYAR DRK
Sbjct:    5 KIFSGSAHTLFSNEVAKCLDISLSKTTINRFSDGEINVQIGESVRGKDIFIIQPTCAPANDHLMELLIMTDALKRSGAKNINAVIPYFGYARQDRK 100          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_FUSNN (Ribose-phosphate pyrophosphokinase OS=Fusobacterium nucleatum subsp. nucleatum GN=prs PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.764e-28
Identity = 57/99 (57.58%), Postives = 78/99 (78.79%), Query Frame = 3
Query:  438 NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            N +K+FSG +N  L+++IA   G++LGK  I+RF DGE+Y++++E+VRG DV++VQ T  P NENLMELLI +DA +RASAK I  +IPY+GYAR DRK
Sbjct:    5 NNVKIFSGNSNLELAKKIAEKAGLQLGKAEIQRFKDGEVYIEIEETVRGRDVFVVQSTSEPVNENLMELLIFVDALKRASAKTINVIIPYYGYARQDRK 103          
The following BLAST results are available for this feature:
BLAST of FC925551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
KPRS_HELPY4.684e-2959.38Ribose-phosphate pyrophosphokinase OS=Helicobacter... [more]
KPRS_BACSU6.118e-2954.81Ribose-phosphate pyrophosphokinase OS=Bacillus sub... [more]
KPRS_THEAB2.325e-2859.60Ribose-phosphate pyrophosphokinase OS=Thermosipho ... [more]
KPRS_VIBPA3.966e-2857.84Ribose-phosphate pyrophosphokinase OS=Vibrio parah... [more]
KPRS_CLOPE3.966e-2859.00Ribose-phosphate pyrophosphokinase OS=Clostridium ... [more]
KPRS_VIBVY5.179e-2857.84Ribose-phosphate pyrophosphokinase OS=Vibrio vulni... [more]
KPRS_VIBVU5.179e-2857.84Ribose-phosphate pyrophosphokinase OS=Vibrio vulni... [more]
KPRS_RHOBA5.179e-2859.18Ribose-phosphate pyrophosphokinase OS=Rhodopirellu... [more]
KPRS_HELHP5.179e-2861.46Ribose-phosphate pyrophosphokinase OS=Helicobacter... [more]
KPRS_FUSNN6.764e-2857.58Ribose-phosphate pyrophosphokinase OS=Fusobacteriu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YK03FM1 TF Citrus clementina cDNA clone KN0AAP3YK03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925551 ID=FC925551; Name=FC925551; organism=Citrus clementina; type=EST; length=764bp
GCAAAATAGCCATTGAAGAAGAAAAAGCAACCGAAGCTCTCTCTGCCTCC
TCACCGTCACCACAAAAACAAAAGGAAAGAAAGAAAGAGAGTGAGTGAGA
GAAAGAGAGATCAAAAGGAGAGAGAGCTGAAACAACACAACAGATAACAA
TGGCTTCGCTGACGATGCCGCGCCCTTCACAATCCACGTCAGCTTCTTGC
TCTTCGCCTATCCCCAGTCGCTGTTCTTTCGGTGACCAAAACCCAACTTT
TTCATTCAGTTTCAGGGACTCTCGCTCTCGGGTTCACGTCTGTAATGCCG
CCGCCGTTAGATGTGACATGGCTGAGGCATTGAATTTTCCAAATGGGAAG
CCTAATATTCCAGTTCTAAACGAACGGACGCTGCCCAAATTTTTGGAAAC
GGCGCGTATGGAGAAAACTGTCAACAGAACTACAAATAACAGGATCAAAT
TGTTCTCTGGCACCGCCAATCCTGCTCTTTCCCAGGAAATTGCTTGCTAC
ATGGGCGTGGAACTGGGAAAGATCAACATAAAGCGATTTGCTGATGGTGA
AATTTATGTTCAGCTGCAAGAGAGTGTTAGAGGATGTGATGTTTATTTGG
TGCAGCCCACCTGTCCTCCGGCAAATGAAAATCTCATGGAGCTTTTGATA
ATGATAGATGCGTGTCGGAGAGCGTCAGCCAAGAATATCACAGCTGTGAT
TCCTTACTTTGGATATGCTAGAGCTGACAGAAAAGACTCAAGGGCGAAAA
ATCATTGCTGCCAA
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