FC925551

Overview
NameFC925551
Unique NameFC925551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_AGRT5 (Ribose-phosphate pyrophosphokinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=prs PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 7.479e-27
Identity = 59/97 (60.82%), Postives = 77/97 (79.38%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            +K+F+G +N  L++ I  Y+ V LG   +KRFAD EI+V++ E+VRG DV++VQ T  PAN++LMELLIMIDA RR+SAK ITAV+PYFGYAR DRK
Sbjct:    1 MKVFAGNSNRHLAEAICKYLNVPLGNATVKRFADQEIFVEISENVRGEDVFIVQSTSFPANDHLMELLIMIDAMRRSSAKRITAVLPYFGYARQDRK 97          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_YERPE (Ribose-phosphate pyrophosphokinase OS=Yersinia pestis GN=prs PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.767e-27
Identity = 57/102 (55.88%), Postives = 76/102 (74.51%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAK 749
            +KLF+G A P L+Q IA  +   LG   + RF+DGE+ VQ+ E+VRG D++++Q TC P N+NLMEL++M+DA RRASA  ITAVIPYFGYAR DR+   A+
Sbjct:    4 MKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSAR 105          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_SALTY (Ribose-phosphate pyrophosphokinase OS=Salmonella typhimurium GN=prs PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 9.767e-27
Identity = 57/102 (55.88%), Postives = 76/102 (74.51%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAK 749
            +KLF+G A P L+Q IA  +   LG   + RF+DGE+ VQ+ E+VRG D++++Q TC P N+NLMEL++M+DA RRASA  ITAVIPYFGYAR DR+   A+
Sbjct:    4 MKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSAR 105          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_SALTI (Ribose-phosphate pyrophosphokinase OS=Salmonella typhi GN=prs PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 9.767e-27
Identity = 57/102 (55.88%), Postives = 76/102 (74.51%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAK 749
            +KLF+G A P L+Q IA  +   LG   + RF+DGE+ VQ+ E+VRG D++++Q TC P N+NLMEL++M+DA RRASA  ITAVIPYFGYAR DR+   A+
Sbjct:    4 MKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSAR 105          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_ECOLI (Ribose-phosphate pyrophosphokinase OS=Escherichia coli (strain K12) GN=prs PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 9.767e-27
Identity = 57/102 (55.88%), Postives = 76/102 (74.51%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAK 749
            +KLF+G A P L+Q IA  +   LG   + RF+DGE+ VQ+ E+VRG D++++Q TC P N+NLMEL++M+DA RRASA  ITAVIPYFGYAR DR+   A+
Sbjct:    4 MKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSAR 105          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_ECOL6 (Ribose-phosphate pyrophosphokinase OS=Escherichia coli O6 GN=prs PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 9.767e-27
Identity = 57/102 (55.88%), Postives = 76/102 (74.51%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAK 749
            +KLF+G A P L+Q IA  +   LG   + RF+DGE+ VQ+ E+VRG D++++Q TC P N+NLMEL++M+DA RRASA  ITAVIPYFGYAR DR+   A+
Sbjct:    4 MKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSAR 105          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_ECO57 (Ribose-phosphate pyrophosphokinase OS=Escherichia coli O157:H7 GN=prs PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 9.767e-27
Identity = 57/102 (55.88%), Postives = 76/102 (74.51%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAK 749
            +KLF+G A P L+Q IA  +   LG   + RF+DGE+ VQ+ E+VRG D++++Q TC P N+NLMEL++M+DA RRASA  ITAVIPYFGYAR DR+   A+
Sbjct:    4 MKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSAR 105          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_BORPE (Ribose-phosphate pyrophosphokinase OS=Bordetella pertussis GN=prs PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 9.767e-27
Identity = 52/100 (52.00%), Postives = 78/100 (78.00%), Query Frame = 3
Query:  450 LFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAK 749
            +F+GTAN  L+ ++  ++ + LGK+ + R++DGE+ V++ E+VRG DV+++QPTC P N+NLME+++M+DA RRASA  ITA IPYFGYAR DR+   A+
Sbjct:    2 IFTGTANTRLAVDVVNHLDMSLGKMTVGRYSDGEVMVEINENVRGKDVFVLQPTCAPTNDNLMEIMVMVDALRRASAGRITAAIPYFGYARQDRRPRSAR 101          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_BACHD (Ribose-phosphate pyrophosphokinase OS=Bacillus halodurans GN=prs PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.767e-27
Identity = 55/97 (56.70%), Postives = 76/97 (78.35%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            +K+F+  +N  L+ EI   +GV +GK ++ RF+DGE+ + ++ES+RGCDV+L+Q T  PANE++MELLIMIDA +RASAK I  VIPY+GYAR DRK
Sbjct:    9 LKVFTLNSNKGLAYEITERIGVPMGKSSVTRFSDGEVQINIEESIRGCDVFLIQSTAAPANEHIMELLIMIDAVKRASAKTINVVIPYYGYARQDRK 105          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_THETN (Ribose-phosphate pyrophosphokinase OS=Thermoanaerobacter tengcongensis GN=prs PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.276e-26
Identity = 57/99 (57.58%), Postives = 75/99 (75.76%), Query Frame = 3
Query:  438 NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            N +K+F+G +NP L+ EIA ++G++L    +  F+DGEI V++ ESVRG  V+++Q TC P N NLMELLIMIDA +RASA  I AVIPY+GYAR DRK
Sbjct:    6 NSLKIFTGNSNPKLASEIAEHLGLKLADSEVGTFSDGEISVRIGESVRGASVFVIQSTCAPVNNNLMELLIMIDAFKRASAAEINAVIPYYGYARQDRK 104          
The following BLAST results are available for this feature:
BLAST of FC925551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
KPRS_AGRT57.479e-2760.82Ribose-phosphate pyrophosphokinase OS=Agrobacteriu... [more]
KPRS_YERPE9.767e-2755.88Ribose-phosphate pyrophosphokinase OS=Yersinia pes... [more]
KPRS_SALTY9.767e-2755.88Ribose-phosphate pyrophosphokinase OS=Salmonella t... [more]
KPRS_SALTI9.767e-2755.88Ribose-phosphate pyrophosphokinase OS=Salmonella t... [more]
KPRS_ECOLI9.767e-2755.88Ribose-phosphate pyrophosphokinase OS=Escherichia ... [more]
KPRS_ECOL69.767e-2755.88Ribose-phosphate pyrophosphokinase OS=Escherichia ... [more]
KPRS_ECO579.767e-2755.88Ribose-phosphate pyrophosphokinase OS=Escherichia ... [more]
KPRS_BORPE9.767e-2752.00Ribose-phosphate pyrophosphokinase OS=Bordetella p... [more]
KPRS_BACHD9.767e-2756.70Ribose-phosphate pyrophosphokinase OS=Bacillus hal... [more]
KPRS_THETN1.276e-2657.58Ribose-phosphate pyrophosphokinase OS=Thermoanaero... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YK03FM1 TF Citrus clementina cDNA clone KN0AAP3YK03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925551 ID=FC925551; Name=FC925551; organism=Citrus clementina; type=EST; length=764bp
GCAAAATAGCCATTGAAGAAGAAAAAGCAACCGAAGCTCTCTCTGCCTCC
TCACCGTCACCACAAAAACAAAAGGAAAGAAAGAAAGAGAGTGAGTGAGA
GAAAGAGAGATCAAAAGGAGAGAGAGCTGAAACAACACAACAGATAACAA
TGGCTTCGCTGACGATGCCGCGCCCTTCACAATCCACGTCAGCTTCTTGC
TCTTCGCCTATCCCCAGTCGCTGTTCTTTCGGTGACCAAAACCCAACTTT
TTCATTCAGTTTCAGGGACTCTCGCTCTCGGGTTCACGTCTGTAATGCCG
CCGCCGTTAGATGTGACATGGCTGAGGCATTGAATTTTCCAAATGGGAAG
CCTAATATTCCAGTTCTAAACGAACGGACGCTGCCCAAATTTTTGGAAAC
GGCGCGTATGGAGAAAACTGTCAACAGAACTACAAATAACAGGATCAAAT
TGTTCTCTGGCACCGCCAATCCTGCTCTTTCCCAGGAAATTGCTTGCTAC
ATGGGCGTGGAACTGGGAAAGATCAACATAAAGCGATTTGCTGATGGTGA
AATTTATGTTCAGCTGCAAGAGAGTGTTAGAGGATGTGATGTTTATTTGG
TGCAGCCCACCTGTCCTCCGGCAAATGAAAATCTCATGGAGCTTTTGATA
ATGATAGATGCGTGTCGGAGAGCGTCAGCCAAGAATATCACAGCTGTGAT
TCCTTACTTTGGATATGCTAGAGCTGACAGAAAAGACTCAAGGGCGAAAA
ATCATTGCTGCCAA
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