FC925551

Overview
NameFC925551
Unique NameFC925551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_NEIMB (Ribose-phosphate pyrophosphokinase OS=Neisseria meningitidis serogroup B GN=prs PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.410e-25
Identity = 51/97 (52.58%), Postives = 73/97 (75.26%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            + +F+G ANP L+Q +  ++ + LG  ++ +F+DGE+ V+L E+VRG DV+++QPTC P N+NLME+L M DA +RASA  IT  IPYFGYAR DR+
Sbjct:    7 LMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVAVELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDRR 103          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_NEIMA (Ribose-phosphate pyrophosphokinase OS=Neisseria meningitidis serogroup A GN=prs PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.410e-25
Identity = 51/97 (52.58%), Postives = 73/97 (75.26%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            + +F+G ANP L+Q +  ++ + LG  ++ +F+DGE+ V+L E+VRG DV+++QPTC P N+NLME+L M DA +RASA  IT  IPYFGYAR DR+
Sbjct:    7 LMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVAVELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDRR 103          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_MARMS (Ribose-phosphate pyrophosphokinase OS=Marinomonas sp. (strain MWYL1) GN=prs PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.410e-25
Identity = 51/104 (49.04%), Postives = 78/104 (75.00%), Query Frame = 3
Query:  438 NRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAK 749
            +++ +F+G ANP L++ +   +G+ +G   + +F+D EI V++ E+VRG DV+++Q TC P+N+NLMEL++M DA RRASA  +TAVIPYFGYAR DR+   A+
Sbjct:    2 SKLMVFTGNANPELARRVVRRLGLPIGNATVGKFSDSEITVEINENVRGKDVFIIQSTCAPSNDNLMELIVMADALRRASATRVTAVIPYFGYARQDRRVRSAR 105          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_BUCAP (Ribose-phosphate pyrophosphokinase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=prs PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.410e-25
Identity = 55/102 (53.92%), Postives = 77/102 (75.49%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAK 749
            +KLF+G + P L++ IA  + + LG   + RF+DGEI VQ+ E+VRG DV+++Q TC P N+N+MEL++M+DA RRASA  ITAVIPYFGY+R DR+   A+
Sbjct:    4 MKLFAGNSIPKLAKFIAHRLYINLGNAAVGRFSDGEISVQINENVRGSDVFIIQSTCSPTNDNIMELVVMVDALRRASAGRITAVIPYFGYSRQDRRVRSAR 105          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_LEPIN (Ribose-phosphate pyrophosphokinase OS=Leptospira interrogans GN=prs PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.406e-25
Identity = 50/100 (50.00%), Postives = 80/100 (80.00%), Query Frame = 3
Query:  435 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            N  I +F+G +N  +++EI  ++G++ GKIN+K+F+DGEI V+++++VRG +V++VQ T  PAN++LMEL++++DA RRAS  +I+ VIPY+GY R DRK
Sbjct:    2 NGDIAVFAGNSNKQIAEEICTHLGIQSGKINLKKFSDGEISVKIEDNVRGKEVFIVQSTSAPANDHLMELILIMDALRRASVSSISVVIPYYGYGRQDRK 101          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_LEPIC (Ribose-phosphate pyrophosphokinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=prs PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.406e-25
Identity = 50/100 (50.00%), Postives = 80/100 (80.00%), Query Frame = 3
Query:  435 NNRIKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            N  I +F+G +N  +++EI  ++G++ GKIN+K+F+DGEI V+++++VRG +V++VQ T  PAN++LMEL++++DA RRAS  +I+ VIPY+GY R DRK
Sbjct:    2 NGDIAVFAGNSNKQIAEEICTHLGIQSGKINLKKFSDGEISVKIEDNVRGKEVFIVQSTSAPANDHLMELILIMDALRRASVSSISVVIPYYGYGRQDRK 101          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_CAUCR (Ribose-phosphate pyrophosphokinase OS=Caulobacter crescentus GN=prs PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.406e-25
Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            +KL SG +N  LSQ IA Y+ + L +  ++RFAD E++V + E+VRG DV+++Q T  PAN+NLMELLI IDA +RAS K ITAVIPYFGYAR DRK
Sbjct:    1 MKLLSGNSNRPLSQAIAEYLDMPLTRAQVRRFADLEVFVTIDENVRGEDVFVIQSTSYPANDNLMELLICIDALKRASGKRITAVIPYFGYARQDRK 97          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_CAUCN (Ribose-phosphate pyrophosphokinase OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=prs PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.406e-25
Identity = 58/97 (59.79%), Postives = 74/97 (76.29%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            +KL SG +N  LSQ IA Y+ + L +  ++RFAD E++V + E+VRG DV+++Q T  PAN+NLMELLI IDA +RAS K ITAVIPYFGYAR DRK
Sbjct:    1 MKLLSGNSNRPLSQAIAEYLDMPLTRAQVRRFADLEVFVTIDENVRGEDVFVIQSTSYPANDNLMELLICIDALKRASGKRITAVIPYFGYARQDRK 97          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_BAUCH (Ribose-phosphate pyrophosphokinase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=prs PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.406e-25
Identity = 56/102 (54.90%), Postives = 76/102 (74.51%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRKDSRAK 749
            +KLF+G A P L+Q IA  +   LG   + RF+DGEI VQ+ E+VRG D++++Q TC P N+NLMEL++M+DA RRASA  ITAV+PYFGY+R DR+   A+
Sbjct:    1 MKLFAGNAIPELAQLIANRLYTSLGVAAVNRFSDGEISVQINENVRGGDLFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVMPYFGYSRQDRRVRSAR 102          
BLAST of FC925551 vs. ExPASy Swiss-Prot
Match: KPRS_XYLFT (Ribose-phosphate pyrophosphokinase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=prs PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.142e-25
Identity = 54/97 (55.67%), Postives = 75/97 (77.32%), Query Frame = 3
Query:  444 IKLFSGTANPALSQEIACYMGVELGKINIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRASAKNITAVIPYFGYARADRK 734
            + +FSG AN  L+Q I   +GV +GK  + RF+DGE  V+++ESVR  +V++VQPTC P+ ENLMELL++IDA +RAS  ++TAVIPYFGY+R DR+
Sbjct:   10 LMVFSGNANKPLTQSICKELGVRMGKSLVSRFSDGEEQVEIEESVRRQEVFVVQPTCAPSAENLMELLVIIDALKRASVSSVTAVIPYFGYSRQDRR 106          
The following BLAST results are available for this feature:
BLAST of FC925551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
KPRS_NEIMB1.410e-2552.58Ribose-phosphate pyrophosphokinase OS=Neisseria me... [more]
KPRS_NEIMA1.410e-2552.58Ribose-phosphate pyrophosphokinase OS=Neisseria me... [more]
KPRS_MARMS1.410e-2549.04Ribose-phosphate pyrophosphokinase OS=Marinomonas ... [more]
KPRS_BUCAP1.410e-2553.92Ribose-phosphate pyrophosphokinase OS=Buchnera aph... [more]
KPRS_LEPIN2.406e-2550.00Ribose-phosphate pyrophosphokinase OS=Leptospira i... [more]
KPRS_LEPIC2.406e-2550.00Ribose-phosphate pyrophosphokinase OS=Leptospira i... [more]
KPRS_CAUCR2.406e-2559.79Ribose-phosphate pyrophosphokinase OS=Caulobacter ... [more]
KPRS_CAUCN2.406e-2559.79Ribose-phosphate pyrophosphokinase OS=Caulobacter ... [more]
KPRS_BAUCH2.406e-2554.90Ribose-phosphate pyrophosphokinase OS=Baumannia ci... [more]
KPRS_XYLFT3.142e-2555.67Ribose-phosphate pyrophosphokinase OS=Xylella fast... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YK03FM1 TF Citrus clementina cDNA clone KN0AAP3YK03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925551 ID=FC925551; Name=FC925551; organism=Citrus clementina; type=EST; length=764bp
GCAAAATAGCCATTGAAGAAGAAAAAGCAACCGAAGCTCTCTCTGCCTCC
TCACCGTCACCACAAAAACAAAAGGAAAGAAAGAAAGAGAGTGAGTGAGA
GAAAGAGAGATCAAAAGGAGAGAGAGCTGAAACAACACAACAGATAACAA
TGGCTTCGCTGACGATGCCGCGCCCTTCACAATCCACGTCAGCTTCTTGC
TCTTCGCCTATCCCCAGTCGCTGTTCTTTCGGTGACCAAAACCCAACTTT
TTCATTCAGTTTCAGGGACTCTCGCTCTCGGGTTCACGTCTGTAATGCCG
CCGCCGTTAGATGTGACATGGCTGAGGCATTGAATTTTCCAAATGGGAAG
CCTAATATTCCAGTTCTAAACGAACGGACGCTGCCCAAATTTTTGGAAAC
GGCGCGTATGGAGAAAACTGTCAACAGAACTACAAATAACAGGATCAAAT
TGTTCTCTGGCACCGCCAATCCTGCTCTTTCCCAGGAAATTGCTTGCTAC
ATGGGCGTGGAACTGGGAAAGATCAACATAAAGCGATTTGCTGATGGTGA
AATTTATGTTCAGCTGCAAGAGAGTGTTAGAGGATGTGATGTTTATTTGG
TGCAGCCCACCTGTCCTCCGGCAAATGAAAATCTCATGGAGCTTTTGATA
ATGATAGATGCGTGTCGGAGAGCGTCAGCCAAGAATATCACAGCTGTGAT
TCCTTACTTTGGATATGCTAGAGCTGACAGAAAAGACTCAAGGGCGAAAA
ATCATTGCTGCCAA
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