FC925553
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIC (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvP PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.291e-42 Identity = 88/168 (52.38%), Postives = 122/168 (72.62%), Query Frame = 3 Query: 333 PSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGK--KKTFI 830 P DTF RRH + A+M + +GL +++ LID VP IR+ K + TE +++++++ +AS N+V++S+IG GY++ +P VI RNI+ENP WYT YTPYQAEI+QGRLE+LLNFQTMI DLTGL +SNASLLDEGTAAAEAM + +++K + KK F+ Sbjct: 20 PLDTFPRRHIGPNLQQTAEMLKELGLSSVEELIDKAVPVGIRLK--KSLDLPKASTEHKILQNLKGIASQNQVFRSYIGAGYHSCIIPGVIQRNILENPGWYTAYTPYQAEISQGRLEALLNFQTMIIDLTGLEISNASLLDEGTAAAEAMFLAYSVRKNETAKKFFV 185
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_DECAR (Glycine dehydrogenase [decarboxylating] OS=Dechloromonas aromatica (strain RCB) GN=gcvP PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.291e-42 Identity = 89/177 (50.28%), Postives = 115/177 (64.97%), Query Frame = 3 Query: 312 ISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 + + AL+ D F RH + A M +G D+L+ LID TVP +IR+ + E + + ++ +AS N V KS IGMGYY+T P VILRN+MENP WYT YTPYQAEIAQGRLE+L+NFQ M+ DLTGL ++NASLLDE TAAAEAM M + K K F++ +N Sbjct: 5 LPLSALEQHDEFIGRHIGPCSTEMATMLTAIGADSLEQLIDQTVPAAIRLPADL--PLPAPRREHEALADLKAMASKNVVNKSCIGMGYYDTLTPKVILRNVMENPGWYTAYTPYQAEIAQGRLEALMNFQQMVIDLTGLEIANASLLDEATAAAEAMTMARRVSKSKSNRFLVDAN 179
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_CHICK (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Gallus gallus GN=GLDC PE=1 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 4.291e-42 Identity = 84/178 (47.19%), Postives = 123/178 (69.10%), Query Frame = 3 Query: 285 YGIGSQTRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKK 818 +G G R I + L D F RRH ++ +M VG+ +++ L+D T+P SIR+ + + D+ + E++++E + +AS NK+++S+IGMGYYN VP I RN++EN W TQYTPYQ E++QGRLESLLN+QTM+ D+TG+ ++NASLLDEGTAAAEAM +C+ K +K Sbjct: 34 WGGGEAARCIE-QLLPRHDDFCRRHIGPREREKREMLSAVGVQSVEELMDKTIPASIRL--RRPLRMDDHVVENEILETLYNIASKNKIWRSYIGMGYYNCSVPQPIARNLLENAGWVTQYTPYQPEVSQGRLESLLNYQTMVCDITGMDVANASLLDEGTAAAEAMQLCHRQNKRRK 208
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_ANAVT (Glycine dehydrogenase [decarboxylating] OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gcvP PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.291e-42 Identity = 86/166 (51.81%), Postives = 116/166 (69.88%), Query Frame = 3 Query: 339 DTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIA 836 + F +RH + D M +++G +LD LI+ TVP +IR+ K + TE + ++++AS N+V++S+IGMGYY+T PPVI RNI+ENP WYT YTPYQ EIAQGRLE+LLNFQTMI DLTGL ++NASLLDE TAAAEAM+M + K K + ++ Sbjct: 32 NNFIQRHIGPSSADIQHMLDVLGFSSLDDLIEKTVPSTIRLH--KKLQLPTAQTEYAALAKLKQIASKNQVFRSYIGMGYYDTITPPVIGRNILENPGWYTAYTPYQPEIAQGRLEALLNFQTMIIDLTGLEIANASLLDEATAAAEAMSMSYGVSKNKANAYFVS 195
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_NITWN (Glycine dehydrogenase [decarboxylating] OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=gcvP PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.320e-42 Identity = 89/168 (52.98%), Postives = 114/168 (67.86%), Query Frame = 3 Query: 330 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 +P+ TFARRH + D A M E VG +L++L++ +P SIR + EG +E++++ HMQ LA+ N+ S IG GY T +P VI RNI+ENPAWYT YTPYQ EI+QGRLE+L NFQTMI DLTGL ++NASLLDE TAAAEAMA+ K K F + Sbjct: 6 EPATTFARRHIGPSSRDIAAMLETVGAKSLEALMNEALPPSIRQKTPL--DLGEGFSETEVLTHMQALAAQNQPLTSLIGQGYSGTILPAVIQRNILENPAWYTAYTPYQPEISQGRLEALFNFQTMICDLTGLDVANASLLDEATAAAEAMALAERASSVKTKAFFV 171
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_BRASB (Glycine dehydrogenase [decarboxylating] OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=gcvP PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.320e-42 Identity = 93/176 (52.84%), Postives = 117/176 (66.48%), Query Frame = 3 Query: 327 LKPSD----TFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 LKP D +FARRH +P D A M E VG ++ L+ T+P +IR + + L+E + I HM+ LA+ N+V+ S IG GY T +P VI RNI+ENPAWYT YTPYQ EI+QGRLE+L NFQTMI DLTGL ++NASLLDEGTAAAEAMA+ + K K F + N Sbjct: 5 LKPLDDAATSFARRHIGPSPRDVAAMLETVGAKSVAELMAQTLPGTIRQATPL--TLEPALSEVEAIGHMRALAAQNQVFTSLIGQGYSGTIMPAVIQRNILENPAWYTAYTPYQPEISQGRLEALFNFQTMICDLTGLDVANASLLDEGTAAAEAMALAERSARAKTKAFFVDRN 178
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_ANASP (Glycine dehydrogenase [decarboxylating] OS=Anabaena sp. (strain PCC 7120) GN=gcvP PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.320e-42 Identity = 85/166 (51.20%), Postives = 116/166 (69.88%), Query Frame = 3 Query: 339 DTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIA 836 + F +RH + D +M +++G +LD LI+ TVP +IR+ + E TE + ++++AS N+V++S+IGMGYY+T P VI RNI+ENP WYT YTPYQ EIAQGRLE+LLNFQTMI DLTGL ++NASLLDE TAAAEAM+M + K K + ++ Sbjct: 32 NNFIQRHIGPSSADIQQMLDVLGFSSLDDLIEKTVPSAIRLHEQL--QLPEAQTEYAALAKLKQIASKNQVFRSYIGMGYYDTITPSVIGRNILENPGWYTAYTPYQPEIAQGRLEALLNFQTMIIDLTGLEIANASLLDEATAAAEAMSMSYGVSKNKANAYFVS 195
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_STRMK (Glycine dehydrogenase [decarboxylating] OS=Stenotrophomonas maltophilia (strain K279a) GN=gcvP PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.560e-42 Identity = 87/173 (50.29%), Postives = 115/173 (66.47%), Query Frame = 3 Query: 315 SVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFII 833 S+ L+ + F RH + A+M ++VG +LD++ DA VP I+ S E +TE Q + ++ +A N V +SFIG GYY TH P VILRNI+ENPAWYT YTPYQAEI+QGR+E+L+NFQT+ ADLTG+ ++NASLLDE TAAAEAM + K K TF + Sbjct: 7 SLRELEHHNAFVERHIGPNDAEIAQMLDVVGHASLDAMTDAIVPAKIK--SPAPLALPESMTEVQALAKIRAIADKNTVLRSFIGQGYYGTHTPNVILRNILENPAWYTAYTPYQAEISQGRMEALINFQTLCADLTGMEIANASLLDEATAAAEAMTLAKRSAKSKSDTFFV 177
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP_SCHPO (Putative glycine dehydrogenase [decarboxylating], mitochondrial OS=Schizosaccharomyces pombe GN=SPAC13G6.06c PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.560e-42 Identity = 88/178 (49.44%), Postives = 111/178 (62.36%), Query Frame = 3 Query: 339 DTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDE----------GLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 DTF RH + DQ E +G + DS + +P S+R + F +ES+ +A+ NK+ KSFIGMGYYN +P I RN++ENP WYTQYTPYQAEI+QGRLES++N+QTMIADLTGL +SNASLLDEGTAA EAM M K K+KTF++ N Sbjct: 47 DTFEPRHIGPSKTDQQYQLESLGYKDFDSFLKDVIPDSVRTPESQLMAFGSVNPNEKNPPVNYSESEFTTLANNVANQNKLIKSFIGMGYYNVKLPAAIQRNVLENPEWYTQYTPYQAEISQGRLESMMNYQTMIADLTGLSISNASLLDEGTAAGEAMVMLMANDKKKRKTFLVDKN 224
BLAST of FC925553 vs. ExPASy Swiss-Prot
Match: GCSP2_COLP3 (Glycine dehydrogenase [decarboxylating] 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gcvP2 PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 9.560e-42 Identity = 83/166 (50.00%), Postives = 114/166 (68.67%), Query Frame = 3 Query: 345 FARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASN 842 F RHN Q M + + +D+++ +ID TVP +IR+ ++ + +E +M+ ++ +AS NKV +S+IG GYY+THVP VILRN+ ENP WYT YTPYQ EI+QGRLE+LLNFQ MI DLT + +SNASLLDE TAAAEAM++C K K F ++ + Sbjct: 16 FISRHNGPDRTQQQHMLDTLKVDSIEQMIDKTVPDNIRL--LQPMALAKPQSEIEMLATLKGIASKNKVNRSYIGQGYYDTHVPHVILRNVFENPGWYTAYTPYQPEISQGRLEALLNFQQMITDLTAMELSNASLLDEATAAAEAMSLCKRASKNKSNVFFVSDD 179 The following BLAST results are available for this feature:
BLAST of FC925553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925553 ID=FC925553; Name=FC925553; organism=Citrus clementina; type=EST; length=842bpback to top |