FC925598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSJ (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica GN=HOX5 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.134e-19 Identity = 54/111 (48.65%), Postives = 71/111 (63.96%), Query Frame = 3 Query: 279 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELI 590 KKR+LTAEQ ++LE F E+KLE +RK +LA LG+ PRQVAVWFQNRRAR KTK++E + LK A H ++ + RL ++V +L EKL +KE S I Sbjct: 86 KKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQ--DKETSPSSATI 194
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX5_ORYSI (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica GN=HOX5 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.134e-19 Identity = 54/111 (48.65%), Postives = 71/111 (63.96%), Query Frame = 3 Query: 279 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKLSVAEKEIKKMSELI 590 KKR+LTAEQ ++LE F E+KLE +RK +LA LG+ PRQVAVWFQNRRAR KTK++E + LK A H ++ + RL ++V +L EKL +KE S I Sbjct: 86 KKRRLTAEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALAADHHALLSDNDRLRAQVISLTEKLQ--DKETSPSSATI 194
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSJ (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. japonica GN=HOX20 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.210e-19 Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 3 Query: 255 GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKL 548 G GG KKR+L+ EQ LE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E YA L+ + H+ + +K L +E+ LK KL Sbjct: 35 GRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKL 139
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica GN=HOX20 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.210e-19 Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 3 Query: 255 GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTA-------HENVVVEKTRLESEVATLKEKL 548 G GG KKR+L+ EQ LE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E YA L+ + H+ + +K L +E+ LK KL Sbjct: 35 GRGGGGGEKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKL 139
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: ATB51_ARATH (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana GN=ATHB-51 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.203e-18 Identity = 58/132 (43.94%), Postives = 75/132 (56.82%), Query Frame = 3 Query: 153 SQFYPSDVLTPTGIVPQQGEPSKPKRRQRKRNTNGNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVEKTRLESEVATLKEKL 548 + + P D T TG V E K R N N +KK++LT+ Q LE F E KL+SDRK KL+ ELGL PRQ+AVWFQNRRAR K K++E+ Y +L+ ++ V EK L EV L+ L Sbjct: 42 NSYTPGD--TQTGPVISVPESEKIMNAYRFPNNNNE----MIKKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEVKKLRALL 167
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSJ (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. japonica GN=HOX8 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.018e-17 Identity = 48/105 (45.71%), Postives = 69/105 (65.71%), Query Frame = 3 Query: 255 GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVE-------KTRLESEVATLKEKL 548 G GG KKR+L AEQ LE F ++KL+ +RK ++A +L L PRQVAVWFQNRRAR KTK+IE +A L++ H+ + +E K L +E+A L++++ Sbjct: 57 GGGGGLGEKKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDRV 161
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX8_ORYSI (Homeobox-leucine zipper protein HOX8 OS=Oryza sativa subsp. indica GN=HOX8 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.018e-17 Identity = 48/105 (45.71%), Postives = 69/105 (65.71%), Query Frame = 3 Query: 255 GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVVE-------KTRLESEVATLKEKL 548 G GG KKR+L AEQ LE F ++KL+ +RK ++A +L L PRQVAVWFQNRRAR KTK+IE +A L++ H+ + +E K L +E+A L++++ Sbjct: 33 GGGGGLGEKKRRLAAEQVRALERSFEADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFAALRSRHDALRLECDALRRDKDALAAEIADLRDRV 137
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.330e-17 Identity = 52/109 (47.71%), Postives = 70/109 (64.22%), Query Frame = 3 Query: 255 GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVV-------EKTRLESEVATLKEKLSVAE 560 G GG KKR+L+ EQ LE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E YA L+ +++++ + +K L +E+ LK KL E Sbjct: 46 GGGGE---KKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEE 151
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.330e-17 Identity = 52/109 (47.71%), Postives = 70/109 (64.22%), Query Frame = 3 Query: 255 GNGGFRALKKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVV-------EKTRLESEVATLKEKLSVAE 560 G GG KKR+L+ EQ LE F E+KLE +RK +LA +LGL PRQVAVWFQNRRAR KTK++E YA L+ +++++ + +K L +E+ LK KL E Sbjct: 46 GGGGE---KKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDEE 151
BLAST of FC925598 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSJ (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. japonica GN=HOX13 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.737e-17 Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 3 Query: 279 KKRKLTAEQAELLEMHFGNEHKLESDRKDKLAAELGLDPRQVAVWFQNRRARDKTKKIEETYATLKTAHENVVV-------EKTRLESEVATLKEKL 548 KKR+L EQ LE F ++KL+ DRK ++A +LGL PRQVAVWFQNRRAR KTK++E +A L+ H+ + +K L +E+ L+EKL Sbjct: 72 KKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRARHDALRADCDALRRDKDALAAEIRELREKL 168 The following BLAST results are available for this feature:
BLAST of FC925598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925598 ID=FC925598; Name=FC925598; organism=Citrus clementina; type=EST; length=638bpback to top |