FC925603

Overview
NameFC925603
Unique NameFC925603
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925603 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.036e-80
Identity = 145/235 (61.70%), Postives = 174/235 (74.04%), Query Frame = 3
Query:    6 SQA*LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNK 710
            S A LSPSFY  TCP V + + + +  A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF+VID MKAA+E+ACPR VSCAD+L IAA+ S+ L+GGPSW VP GRRDS      LAN NLPGP  TL +LK  F+NVGL+   DLVALSG HTFG++QCQF   RLY+F  TG PDPTLD ++L  LRK CP+ GN  VL +FD+ TP +FDNK
Sbjct:   20 SHAQLSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDFDLRTPTLFDNK 254          
BLAST of FC925603 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.036e-80
Identity = 147/235 (62.55%), Postives = 174/235 (74.04%), Query Frame = 3
Query:    6 SQA*LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNK 710
            S A LSPSFY  TCP V +     +  A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF+VID MKAAVE+ACP+ VSCAD+L IAA+ SV L+GGPSW VP GRRDS      LAN NLP PF TL++LK  F+NVGL+   DLVALSG HTFG+ QCQF   RLY+F+NTG PDPTLD ++L  LRK CP+ GN  VL +FD+ TP +FDNK
Sbjct:   20 SHAQLSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDFDLRTPTLFDNK 254          
BLAST of FC925603 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.354e-80
Identity = 148/235 (62.98%), Postives = 178/235 (75.74%), Query Frame = 3
Query:    6 SQA*LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNT-IDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDN 707
            S A LS +FYS+TCPNV   +  V+++A  +D RIG SLIRLHFHDCFVDGCD S+LLD+  T I SEK A PN NS RGF+V+DN+K AVE ACP VVSC DIL +A+E SV+L+GGPSW V LGRRD RTAN+  AN +LP PF+ L  L   F NVGLN   DLVALSGAHTFGRAQC+ F  RL++F+NTG PDPTL+ T+L  L+++CPQGG+G  + N D TTPD FDN
Sbjct:   21 SNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVN-DLVALSGAHTFGRAQCRTFSPRLFNFSNTGNPDPTLNTTYLATLQQICPQGGSGFTVTNLDPTTPDTFDN 254          
BLAST of FC925603 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 3.939e-80
Identity = 150/235 (63.83%), Postives = 175/235 (74.47%), Query Frame = 3
Query:    6 SQA*LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNK 710
            S A L P FY  TCP V + I +++     +D RI ASL+RLHFHDCFV GCDASILLD++ +  +EK AAPN NSARGF VID MK A+ERACP  VSCADILTIA++ SV LSGGP W VPLGRRDS  A  ALAN  LP PF  L +LK++F +VGLN   DLVALSG HTFGRAQCQF   RLY+FN T  PDP+L+ T+L +LR+LCPQ GNG VL NFDV TPD FD++
Sbjct:   27 SNAQLRPDFYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNSPDPSLNPTYLVELRRLCPQNGNGTVLVNFDVVTPDAFDSQ 261          
BLAST of FC925603 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.686e-78
Identity = 140/230 (60.87%), Postives = 171/230 (74.35%), Query Frame = 3
Query:   18 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDN 707
            L+ +FYS TCPN    +   +++AF SD RIGASLIRLHFHDCFVDGCDASILLD + +I SEK A PN NSARGF V+DN+K A+E  CP VVSC+DIL +A+E SV+L+GGPSW V LGRRDS TAN A AN  +P PF+ L  + S F  VGLN   DLVALSGAHTFGRA+C  F  RL++F+ T  PDPTL++T L  L++LCPQ G+   + N D++TPD FDN
Sbjct:    2 LNATFYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTN-DLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQNGSASTITNLDLSTPDAFDN 230          
BLAST of FC925603 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.686e-78
Identity = 140/234 (59.83%), Postives = 174/234 (74.36%), Query Frame = 3
Query:    6 SQA*LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDN 707
            S A L+ +FYS TCPN    +   +++A  SD RIGASLIRLHFHDCFV+GCDASILLD T +I SEK A PN NSARGF V+DN+K A+E ACP VVSC+D+L +A+E SV+L+GGPSW V LGRRDS TAN A AN ++P P ++L  +   F  VGLN   DLVALSGAHTFGRA+C  F  RL++F+ TG PDPTL++T L  L++LCPQ G+   + N D++TPD FDN
Sbjct:   28 SSAQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTN-DLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDN 260          
BLAST of FC925603 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 5.509e-74
Identity = 133/234 (56.84%), Postives = 170/234 (72.65%), Query Frame = 3
Query:    6 SQA*LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDN 707
            S A L+ +FYS TCPN    +   +++A  SD RIG SLIRLHFHDCFV+GCD S+LLD T++I SEK A  N NS RGF V+D++K A+E ACP +VSC+DIL +A+E SV+L+GGPSW V LGRRD  TAN + AN +LP PF+ L+ + S F  VGL    D+V+LSGAHTFGR QC  F  RL++FN TG PDPTL++T L  L++LCPQ G+   + N D++TPD FDN
Sbjct:   29 SSAQLNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLK-TTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQNGSNTGITNLDLSTPDAFDN 261          
BLAST of FC925603 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.559e-71
Identity = 137/233 (58.80%), Postives = 165/233 (70.82%), Query Frame = 3
Query:    9 QA*LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDN 707
            +A LSP  Y+ +CPN+L  + D +K A  ++IR+ ASLIRLHFHDCFV+GCDAS+LLD TN   SEK A PN NS RGFEVID +KAAVE ACP VVSCADILT+AA  SV LSGGP W V LGR+D   AN++ AN NLP PF+ LD + + F  VGLN   D+VALSGAHTFG+A+C  F  RL++F   G PD TL+ T L  L+ +CP GGNG   A  D  + D FDN
Sbjct:   27 RAQLSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGTN---SEKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSAN-NLPSPFEPLDAIIAKFAAVGLN-VTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPLDRNSTDAFDN 254          
BLAST of FC925603 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 257.299 bits (656), Expect = 5.899e-68
Identity = 132/233 (56.65%), Postives = 162/233 (69.53%), Query Frame = 3
Query:    9 QA*LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDN 707
            +A LSP  Y+ +CPN++  +   +  A  ++IR+ ASLIRLHFHDCFV+GCDAS+LLD     DSEK A PN NSARGFEVID +KAAVE ACP VVSCADILT+AA  SV LSGGP W V LGR+D   AN+  AN NLP PF+ LD + + F  V LN   D+VALSGAHTFG+A+C  F  RL++F   G PD TL+ + L  L+ +CP GGN  + A  D +T D FDN
Sbjct:   27 RAQLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGA---DSEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSAN-NLPSPFEPLDAIIAKFVAVNLN-ITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDN 254          
BLAST of FC925603 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.314e-67
Identity = 134/230 (58.26%), Postives = 163/230 (70.87%), Query Frame = 3
Query:   18 LSPSFYSSTCPNVLNTIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDN 707
            LS +FY +TCPN LNTI   +++A SS+ R+ ASLIRLHFHDCFV GCDASILLD T +I+SEK A PN  SARGF +I++ K  VE+ CP VVSCADILT+AA  + A  GGPSW V LGRRDS TA++ LA  +LPGPFD L+ L SSF + GL+ + D+VALSGAHT G+AQC  FR R+Y  N T      +DA F    R+ CPQ G  G LA  D+ TP+ FDN
Sbjct:   29 LSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTR-DMVALSGAHTIGQAQCFLFRDRIYS-NGT-----DIDAGFASTRRRQCPQEGENGNLAPLDLVTPNQFDN 251          
The following BLAST results are available for this feature:
BLAST of FC925603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER38_ARATH1.036e-8061.70Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER37_ARATH1.036e-8062.55Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER15_IPOBA1.354e-8062.98Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER22_ARATH3.939e-8063.83Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PERA2_ARMRU3.686e-7860.87Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER53_ARATH3.686e-7859.83Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER54_ARATH5.509e-7456.84Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PERN_ARMRU2.559e-7158.80Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER59_ARATH5.899e-6856.65Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PERX_NICSY1.314e-6758.26Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YH10FM1 TF Citrus clementina cDNA clone KN0AAP11YH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925603 ID=FC925603; Name=FC925603; organism=Citrus clementina; type=EST; length=711bp
CACCATCTCAAGCTTAACTTTCTCCATCTTTTTATTCTTCCACATGCCCT
AATGTATTGAACACTATCGAGGATGTGCTTAAGAAAGCTTTCTCGTCCGA
TATCCGGATCGGTGCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTG
TTGATGGGTGTGATGCATCGATTTTGCTGGACAGCACTAACACCATAGAC
AGCGAGAAATTTGCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGT
TATTGATAACATGAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTT
CCTGCGCTGATATTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCA
GGGGGTCCGTCATGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGC
AAACAGAGCTCTTGCAAATCAGAATCTTCCAGGACCATTTGATACTCTTG
ATGAGCTCAAATCTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGAT
CTTGTTGCACTCTCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATT
TTTCAGGGGCAGATTATACGATTTTAACAACACTGGCAAGCCAGACCCAA
CCCTAGACGCAACCTTCTTACAACAACTGAGGAAACTATGCCCACAAGGT
GGAAACGGCGGCGTTCTTGCTAATTTTGATGTCACGACACCTGATGTTTT
CGACAACAAAT
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