FC925617

Overview
NameFC925617
Unique NameFC925617
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK_STAAB (Pyruvate kinase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=pyk PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14
Identity = 48/158 (30.38%), Postives = 83/158 (52.53%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATL 649
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGEL 152          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK_STAA8 (Pyruvate kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=pyk PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14
Identity = 48/158 (30.38%), Postives = 83/158 (52.53%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATL 649
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGEL 152          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK_STAA3 (Pyruvate kinase OS=Staphylococcus aureus (strain USA300) GN=pyk PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14
Identity = 48/158 (30.38%), Postives = 83/158 (52.53%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATL 649
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGEL 152          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK1_TRYBB (Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=PYK1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14
Identity = 43/128 (33.59%), Postives = 71/128 (55.47%), Query Frame = 2
Query:  185 KIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQE--ATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 562
            +IV T+GP ++SV+ +   +K+GMSVAR +FS G+ EYHQ T+ N++AA         + LDT GPE++     +  +S      V +T D   E   T +   I++  L  +V+ G +I++   + T
Sbjct:   23 RIVCTIGPSTQSVEALKNLMKSGMSVARMNFSHGSHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEVSFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTNAVRPGGSIYVDDGVMT 150          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK_STAS1 (Pyruvate kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=pyk PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.833e-14
Identity = 51/158 (32.28%), Postives = 82/158 (51.90%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV-KGN-DVTCVIKNTATL 649
            TKIV T+GP S S +++   +KAGM+VAR +FS G+   H+  ++ ++   K   K  A++LDT GPE++  N  +  I L+  GS V       E T +   + ++ L   V++G  I +   L        + L+V  + K N +V C + NT  L
Sbjct:    4 TKIVCTIGPASESEEMLEKLIKAGMNVARLNFSHGDQAEHKARIDTIRKVSKRLGKTVAILLDTKGPEIRTHNMKDGLIELE-KGSEVTVSMTEVEGTPEKFSVTYENLINDVEEGSYILLDDGL--------IELQVKSIDKANGEVLCDVLNTGEL 152          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK_EIMTE (Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14
Identity = 52/142 (36.62%), Postives = 78/142 (54.93%), Query Frame = 2
Query:  128 IRMASILEPSKASFFPA-MTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTK-KLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFI 544
            IRM+ ILE  +   F A  TKIV T+GP    VD +   + AGM+V R +FS G+ E H   ++NL+ A+K    K  A++LDT GPE++  + + +K I L A   + +  D         +  +++ L  SVK G+TI I
Sbjct:   39 IRMSQILEHHEDEDFSAHRTKIVCTMGPSCWDVDKMVQLIDAGMNVCRLNFSHGDHEAHGRVVKNLQEALKQRPGKRVALLLDTKGPEIRTGMLEGDKPIELHAGDMLKIVTDYSFVGNKSCIACSYEKLPSSVKPGNTILI 180          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK2_TRYBB (Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=PYK2 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.618e-14
Identity = 43/128 (33.59%), Postives = 71/128 (55.47%), Query Frame = 2
Query:  185 KIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQE--ATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 562
            +IV T+GP ++SV+ +   +K+GMSVAR +FS G+ EYHQ T+ N++AA         + LDT GPE++     +  ++      V +T D   E   T +   I++  L K+V  G +I++   + T
Sbjct:   23 RIVCTIGPSTQSVEALKNLMKSGMSVARMNFSHGSHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEVTFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTKAVPVGGSIYVDDGVMT 150          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK_STAES (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pyk PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13
Identity = 49/158 (31.01%), Postives = 81/158 (51.27%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGN--DVTCVIKNTATL 649
            TKIV T+GP S S +++   + AGM+VAR +FS G+ E H+  ++ ++   K   K   ++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V  G  I +   L        V L+V E+  +  +V C I NT  L
Sbjct:    4 TKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGLIVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGL--------VELQVKEINKDKGEVKCDILNTGEL 152          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYK_STAEQ (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pyk PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13
Identity = 49/158 (31.01%), Postives = 81/158 (51.27%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGN--DVTCVIKNTATL 649
            TKIV T+GP S S +++   + AGM+VAR +FS G+ E H+  ++ ++   K   K   ++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V  G  I +   L        V L+V E+  +  +V C I NT  L
Sbjct:    4 TKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGLIVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGL--------VELQVKEINKDKGEVKCDILNTGEL 152          
BLAST of FC925617 vs. ExPASy Swiss-Prot
Match: KPYM_FELCA (Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13
Identity = 44/138 (31.88%), Postives = 78/138 (56.52%), Query Frame = 2
Query:  182 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFT 562
            T I+ T+GP SRSV+++   +K+GM+VAR +FS G  EYH ET++N++AA ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    VL +++  + K V+ G  +++   L +
Sbjct:   45 TGIICTIGPASRSVEILKEMIKSGMNVARLNFSHGTHEYHAETIKNVRAATESFASDPIRYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENVLWLDYKNICKVVEVGSKVYVDDGLIS 182          
The following BLAST results are available for this feature:
BLAST of FC925617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
KPYK_STAAB4.466e-1430.38Pyruvate kinase OS=Staphylococcus aureus (strain b... [more]
KPYK_STAA84.466e-1430.38Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]
KPYK_STAA34.466e-1430.38Pyruvate kinase OS=Staphylococcus aureus (strain U... [more]
KPYK1_TRYBB4.466e-1433.59Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=... [more]
KPYK_STAS15.833e-1432.28Pyruvate kinase OS=Staphylococcus saprophyticus su... [more]
KPYK_EIMTE7.618e-1436.62Pyruvate kinase OS=Eimeria tenella GN=PYK PE=2 SV=... [more]
KPYK2_TRYBB7.618e-1433.59Pyruvate kinase 2 OS=Trypanosoma brucei brucei GN=... [more]
KPYK_STAES1.697e-1331.01Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_STAEQ1.697e-1331.01Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYM_FELCA2.216e-1331.88Pyruvate kinase isozyme M1 OS=Felis catus GN=PKM2 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YM17FM1 TF Citrus clementina cDNA clone KN0AAP8YM17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925617 ID=FC925617; Name=FC925617; organism=Citrus clementina; type=EST; length=678bp
TAAAATTCAAAACATTCTAATCAACGCTAACCGCTGCCTCTTTCATCTCT
CGTACTCTCTCTGTATCTCTCTGTATCTCTCTGTTCAGTGAAAGATGCAT
TCAAGTCACTTGCTTCTCGAGGAGCCAATCAGGATGGCTTCAATCCTGGA
GCCATCCAAAGCCAGTTTCTTCCCGGCAATGACCAAAATTGTCGGAACGC
TTGGTCCTAAATCTCGATCTGTTGATGTTATATCCGGTTGCCTCAAAGCT
GGAATGTCTGTGGCTAGATTCGATTTCTCGTGGGGTAATACTGAATACCA
CCAAGAGACCTTGGAGAATCTCAAGGCGGCAGTTAAGACTACTAAGAAGC
TTTGTGCTGTTATGTTGGACACAGTGGGTCCCGAATTGCAGGTTGTTAAT
AAGAGTGAGAAGGCAATTTCACTTAAGGCAGATGGTTCTGTTGTTCTCAC
ACCTGACTGTGGACAAGAAGCCACTTCTCAAGTTTTGCCCATCAATTTCG
ATGGACTTGCTAAGTCAGTGAAGAAAGGAGACACCATTTTTATCGGTCAA
TACTTGTTCACTGGAAGTGAGACTACTTCTGTGTGGCTGGAGGTTTCTGA
AGTGAAAGGAAATGATGTAACTTGTGTGATAAAGAATACTGCAACGTTGG
CTGGTTCACTTTTCACTTTACATGCCTC
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