FC925658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXPB3_ORYSJ (Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.898e-25 Identity = 55/159 (34.59%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 130 GACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNH--SNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW 600 GACG+ + + G ++KDG GCG+C+Q+RC N CSG VI+TD+N+ ++ F +S AF A++ G+ + G++D+++KRVPC + + VEE S P Y AV V Y+ G ++V +D+ + S +W M ++G++W Sbjct: 63 GACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCVNHPACSGNPETVIITDMNYYPVSKYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPCNFPGLKVTFHVEEGS-NPVYFAVLVEYEDGDGDVVQVDLMEANSQSWTPMRESWGSIW 220
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXPB9_ORYSJ (Expansin-B9 OS=Oryza sativa subsp. japonica GN=EXPB9 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.479e-25 Identity = 56/169 (33.14%), Postives = 98/169 (57.99%), Query Frame = 1 Query: 103 FSQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHS--NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYK-NQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW 600 + S + GACG ++ L G ++ G ++KDG GCG+C++++C+ P CS + V +TD+N+ + F S +AF A++ GK ++ K G++D++++RV C+Y Q + VE+ S PNYLAV V + +++ MD+ + G W M ++GA+W Sbjct: 55 YGSGSTDNGGACGIKNVNLPPYNGMISCGNVPIFKDGRGCGSCYEVKCEQPAACSKQPVTVFITDMNYEPISAYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPGGQKVTFHVEKGS-NPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIW 222
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXPB1_ORYSJ (Expansin-B1 OS=Oryza sativa subsp. japonica GN=EXPB1a PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.479e-25 Identity = 57/176 (32.39%), Postives = 95/176 (53.98%), Query Frame = 1 Query: 124 SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQT--DFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSRVPNGALQFR 639 + GACGY + + G + G ++KDG GCG+CF+++C P CS K + +TD+N F +S AF A++ GK +++ K G++D +++RV C+Y E + PNYLA+ V Y G ++V +++ + GS W + ++GA+W DT + G R Sbjct: 60 NGGACGYKDVDKAPFLGMNSCGNDPIFKDGKGCGSCFEIKCSKPEACSDKPALIHVTDMNDEPIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKCKYPADTKITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLKGPFSVR 235
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: MPAL1_LOLPR (Pollen allergen Lol p 1 OS=Lolium perenne PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.238e-25 Identity = 57/177 (32.20%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 124 SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTD--FVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSRVPNGALQFRF 642 + GACGY ++ + G G ++KDG GCG+CF+++C P CSG+ V +TD N F +S AF +++ +G+ Q++ G ++++++RV C+Y + E + PNYLA+ V Y G ++VA+D+ + G W + ++GAVW DT G R+ Sbjct: 60 NGGACGYKNVDKAPFNGMTGCGNTPIFKDGRGCGSCFEIKCTKPESCSGEAVTVTITDDNEEPIAPYHFDLSGHAFGSMAKKGEEQNVRSAGELELQFRRVKCKYPDDTKPTFHVEKASNPNYLAILVKYVDGDGDVVAVDIKEKGKDKWIELKESWGAVWRIDTPDKLTGPFTVRY 236
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 4.229e-25 Identity = 65/180 (36.11%), Postives = 99/180 (55.00%), Query Frame = 1 Query: 130 GACGY-GSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNH-----SNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGS-SNWGYMSRNYGAVWDTSRVPNGALQFRFVV 648 GACGY G++ + +AAG PS+YK G GCG+C+Q++C + CSG V+LTD S F +S AF A++N G+ + GV+ ++Y RVPC + L V+ S PNY AV V Y+ G ++ +++ Q G+ + W M +++GAVW + ALQ F + Sbjct: 56 GACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVKLTFVVDVGS-NPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLN--AGSALQAPFSI 232
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXPB1_MAIZE (Expansin-B1 OS=Zea mays GN=EXPB1 PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 7.213e-25 Identity = 63/181 (34.81%), Postives = 94/181 (51.93%), Query Frame = 1 Query: 124 SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTD--FVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSRVPNGALQFRFVVTS 654 + GACG ++ L G A G ++KDG GCG+C+++RCK CSG V +TD+N+ F +S +AF +L+ G I G++DVE++RV C+Y V E PNYLAV V Y ++V M++ S+ W M ++GA+W DT++ G R S Sbjct: 62 NGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVYITDMNYEPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTSES 242
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.213e-25 Identity = 62/167 (37.13%), Postives = 93/167 (55.69%), Query Frame = 1 Query: 130 GACGY-GSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNH-----SNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGS-SNWGYMSRNYGAVWDTS 609 GACGY ++ + +AAG PS+YK G GCG+C+Q++C + CSG V+LTD S F +S AF A++N G+ + GV+ ++Y RVPC + L V+ S P+Y AV V Y+ G ++ MD+ Q G+ + W M +++GAVW S Sbjct: 56 GACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSACSGNPVTVVLTDECPGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNWGGVMLTFAVDAGS-NPSYFAVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLS 221
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXPB8_ORYSJ (Expansin-B8 OS=Oryza sativa subsp. japonica GN=EXPB8 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 9.421e-25 Identity = 60/166 (36.14%), Postives = 92/166 (55.42%), Query Frame = 1 Query: 115 SALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNH--SNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDV--AQVGSSNWGYMSRNYGAVW 600 +A + GACG+ + G + G LYK G GCG+C+++RC CSG V +TD+N+ +Q F +S AF L+ G+ D+ + G++DV++ RVPCE+ + VEE S P YLAV V Y+ G ++ +D+ A G W M ++G+VW Sbjct: 64 AADNGGACGFKKVNQYPFMGMTSCGNQPLYKGGKGCGSCYRVRCNRNPACSGNAQTVAITDMNYFPLSQYHFDLSGIAFGRLAKPGRADDLRRAGIIDVQFARVPCEFPGLKVGFHVEEGS-SPVYLAVLVEYENGDGDVAQVDLKEAGAGGGRWTPMRESWGSVW 228
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.230e-24 Identity = 63/173 (36.42%), Postives = 96/173 (55.49%), Query Frame = 1 Query: 109 QASALSSGACGYGS-LALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTD-------LNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQV-GSSNWGYMSRNYGAVW 600 Q GACGY S + +AAG PSL+K+G GCG+C+Q++C CSG+ V++TD LN + F +S AF A++N+G G + GV+ ++YKRVPC + N+A +V+ S P YLA+ V Y G ++ A+ + + G W M +++GA W Sbjct: 57 QGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGNRACSGRPVTVVITDSCPGGVCLNEA--AHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFA-MNVAFKVDAGS-NPYYLAILVQYANGDGDLAAVHIMEARGGGGWKAMQQSWGATW 225
BLAST of FC925658 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.741e-24 Identity = 64/181 (35.36%), Postives = 97/181 (53.59%), Query Frame = 1 Query: 106 SQASALSSGACGY-GSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNH-----SNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSPKPNYLAVKVLYQGGQTEMVAMDVAQVGSS----NWGYMSRNYGAVWDTSRVP 618 + S GACGY G + +AAG PS+Y+ G GCG+C+Q++C CSGK V+LTDL F +S AF A++ G+ + G + V+Y RVPC+++ ++A RV+ S YLAV V + G ++ A+D+ Q G S +W M +++GAVW + P Sbjct: 49 ANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPSCSGKPVTVVLTDLCPGGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGS-NQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNSGP 228 The following BLAST results are available for this feature:
BLAST of FC925658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925658 ID=FC925658; Name=FC925658; organism=Citrus clementina; type=EST; length=670bpback to top |