FC925663
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925663 vs. ExPASy Swiss-Prot
Match: PUB6_ARATH (U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 4.424e-12 Identity = 43/103 (41.75%), Postives = 58/103 (56.31%), Query Frame = 3 Query: 150 PTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLNEAAKSP 458 P CPISL +M DPV + +G TY+R IEKW F+ +N+CP T+Q L LTPN+ ++ LI SWC N GI +PT P +L ++SP Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKW-FSDGHNSCPKTQQQL-PHLSLTPNYCVKGLIASWCEQN---GI-TVPTGPPESLDLNYWRLAMSDSESP 372
BLAST of FC925663 vs. ExPASy Swiss-Prot
Match: PUB19_ARATH (U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.867e-11 Identity = 49/148 (33.11%), Postives = 73/148 (49.32%), Query Frame = 3 Query: 165 CPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLIQSWCTLN----ASYGIERIPTPK----PPINKAQITKLLNEAAKSPQMQ-IKCLKKLRSIAAENETNKRCLESAGAVEFLASFVTNSN 581 CPISL IM DPV + +G TYDR SI KW FA N TCP T + L S L N +++++IQS+ N G +++ + K L E K + + +K L ++R + + + CL AG VE L + + + Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKW-FASGNITCPKTGKTLVSTV-LVDNFSVKQVIQSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRILTKTSTFYRSCLVEAGVVESLMKILRSDD 429
BLAST of FC925663 vs. ExPASy Swiss-Prot
Match: PUB50_ARATH (Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana GN=PUB50 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.745e-11 Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 144 DVPTFFLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLIQSWCTLNAS 371 D+P+ F+CPI +MK+P G +Y+ E+I++WL G ++T PMT L + LTPNHTLR LIQ W + A+ Sbjct: 688 DIPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMG-HDTSPMTNLRLDYQM-LTPNHTLRSLIQDWHSKRAA 761
BLAST of FC925663 vs. ExPASy Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 8.343e-11 Identity = 34/94 (36.17%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 159 FLCPISLAIMKDPVTVPTGITYDRESIEKWLFAGKNNTCPMTKQVLSSECELTPNHTLRRLIQSWCTLNASYGIERIPTPKPPINKAQITKLLN 440 F CP+SL +M DPV V +G TY++ I++W+ G CP T+Q L + L PN+T++ LI +WC N ++P P + +++ LL+ Sbjct: 234 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGL-KVCPKTRQTL-THTTLIPNYTVKALIANWCETND----VKLPDPNKSTSLNELSPLLS 321 The following BLAST results are available for this feature:
BLAST of FC925663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925663 ID=FC925663; Name=FC925663; organism=Citrus clementina; type=EST; length=606bpback to top |