FC925664
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925664 vs. ExPASy Swiss-Prot
Match: THIC_SALEP (Thiamine biosynthesis protein thiC OS=Salmonella enteritidis PT4 (strain P125109) GN=thiC PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.038e-24 Identity = 50/73 (68.49%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 4 AKWCLAYHKENFAYQHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVII 222
AKWCL++HKENF ++H+ EI +IC YDV+LS+GDGLRPGSI DAND AQF+EL T GELT+ AW+ DVQV+I
Sbjct: 360 AKWCLSHHKENFLFEHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFSELHTLGELTKIAWEYDVQVMI 432
BLAST of FC925664 vs. ExPASy Swiss-Prot
Match: THIC_SALDC (Thiamine biosynthesis protein thiC OS=Salmonella dublin (strain CT_02021853) GN=thiC PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.038e-24 Identity = 50/73 (68.49%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 4 AKWCLAYHKENFAYQHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVII 222
AKWCL++HKENF ++H+ EI +IC YDV+LS+GDGLRPGSI DAND AQF+EL T GELT+ AW+ DVQV+I
Sbjct: 360 AKWCLSHHKENFLFEHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFSELHTLGELTKIAWEYDVQVMI 432
BLAST of FC925664 vs. ExPASy Swiss-Prot
Match: THIC_SALCH (Thiamine biosynthesis protein thiC OS=Salmonella choleraesuis GN=thiC PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.038e-24 Identity = 50/73 (68.49%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 4 AKWCLAYHKENFAYQHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVII 222
AKWCL++HKENF ++H+ EI +IC YDV+LS+GDGLRPGSI DAND AQF+EL T GELT+ AW+ DVQV+I
Sbjct: 360 AKWCLSHHKENFLFEHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFSELHTLGELTKIAWEYDVQVMI 432
BLAST of FC925664 vs. ExPASy Swiss-Prot
Match: THIC_SALA4 (Thiamine biosynthesis protein thiC OS=Salmonella agona (strain SL483) GN=thiC PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.038e-24 Identity = 50/73 (68.49%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 4 AKWCLAYHKENFAYQHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVII 222
AKWCL++HKENF ++H+ EI +IC YDV+LS+GDGLRPGSI DAND AQF+EL T GELT+ AW+ DVQV+I
Sbjct: 360 AKWCLSHHKENFLFEHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFSELHTLGELTKIAWEYDVQVMI 432
BLAST of FC925664 vs. ExPASy Swiss-Prot
Match: THIC_PHOPR (Thiamine biosynthesis protein thiC OS=Photobacterium profundum GN=thiC PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.038e-24 Identity = 49/73 (67.12%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 4 AKWCLAYHKENFAYQHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVII 222
AKWCLA+H+E+F Y H+ EI +IC QYD++LS+GDGLRPGS+ DAND AQF+EL T GELT+ AW+ DVQV+I
Sbjct: 356 AKWCLAHHEESFLYMHFREICEICAQYDISLSLGDGLRPGSVADANDEAQFSELRTLGELTKIAWEYDVQVMI 428
BLAST of FC925664 vs. ExPASy Swiss-Prot
Match: THIC_GEOKA (Thiamine biosynthesis protein thiC OS=Geobacillus kaustophilus GN=thiC PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.038e-24 Identity = 51/73 (69.86%), Postives = 61/73 (83.56%), Query Frame = 1
Query: 4 AKWCLAYHKENFAYQHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVII 222
A+WCLA+H+ENF Y H++EI +I QYDVA+S+GDGLRPGSI DAND AQFAEL T GELT+ AW DVQV+I
Sbjct: 300 AQWCLAHHEENFLYTHFEEICEILKQYDVAISLGDGLRPGSIADANDEAQFAELKTLGELTKIAWKHDVQVMI 372
BLAST of FC925664 vs. ExPASy Swiss-Prot
Match: THIC_BRAJA (Thiamine biosynthesis protein thiC OS=Bradyrhizobium japonicum GN=thiC PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.038e-24 Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 1
Query: 4 AKWCLAYHKENFAYQHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVII 222
AKWCLA+HKE+F Y H+DEI D+ +YDV+ S+GDGLRPGSI DAND AQFAEL T GELT+ AWDK QV+I
Sbjct: 342 AKWCLAHHKESFLYTHFDEICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTKIAWDKGCQVMI 414
BLAST of FC925664 vs. ExPASy Swiss-Prot
Match: THIC_AGRRK (Thiamine biosynthesis protein thiC OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=thiC PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.038e-24 Identity = 50/73 (68.49%), Postives = 60/73 (82.19%), Query Frame = 1
Query: 4 AKWCLAYHKENFAYQHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVII 222
AKWCL +H+E+F Y+H++EI DIC YDV+ S+GDGLRPGSI DAND AQFAEL T GELT+ AW KD QV+I
Sbjct: 337 AKWCLHHHRESFLYEHFEEICDICRTYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTKIAWAKDCQVMI 409
BLAST of FC925664 vs. ExPASy Swiss-Prot
Match: THIC_SALPC (Thiamine biosynthesis protein thiC OS=Salmonella paratyphi C (strain RKS4594) GN=thiC PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.661e-24 Identity = 49/73 (67.12%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 4 AKWCLAYHKENFAYQHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVII 222
AKWCL++HKENF ++H+ EI +IC YD++LS+GDGLRPGSI DAND AQF+EL T GELT+ AW+ DVQV+I
Sbjct: 360 AKWCLSHHKENFLFEHFREICEICAAYDISLSLGDGLRPGSIQDANDEAQFSELHTLGELTKIAWEYDVQVMI 432
BLAST of FC925664 vs. ExPASy Swiss-Prot
Match: THIC_RALSO (Thiamine biosynthesis protein thiC OS=Ralstonia solanacearum GN=thiC PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.661e-24 Identity = 49/73 (67.12%), Postives = 59/73 (80.82%), Query Frame = 1
Query: 4 AKWCLAYHKENFAYQHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVII 222
AKWCLA+HKENF Y H+DEI +I YDV+ S+GDGLRPG I D+ND AQF EL T GELT++AW+ DVQV+I
Sbjct: 360 AKWCLAHHKENFLYTHFDEICEIMKAYDVSFSLGDGLRPGCIADSNDAAQFGELYTLGELTKKAWEHDVQVMI 432 The following BLAST results are available for this feature:
BLAST of FC925664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 419
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925664 ID=FC925664; Name=FC925664; organism=Citrus clementina; type=EST; length=302bpback to top |