FC925747
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0L_HUMAN (60S acidic ribosomal protein P0-like OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.731e-22 Identity = 57/127 (44.88%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 177 KASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVPPRH 557 + +A K Y K+ QLL++Y + + ADNVGS Q+Q IR LRG VVLMGKNTMM++ IR H E N A L+P + GNVG +FTK DL A AR G +AP +V VP ++ Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTMMRKAIRGHLE--NNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQN 127
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_NEUCR (60S acidic ribosomal protein P0 OS=Neurospora crassa GN=crpp0 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.340e-21 Identity = 52/121 (42.98%), Postives = 71/121 (58.68%), Query Frame = 3 Query: 186 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVP 548 K+ K Y KL LLE+Y I + + DNV S Q+ IR+ LRG++VVLMGKNTM++R ++ T + L+P ++GNVG +FT GDL APAR G +AP DV +P Sbjct: 4 KSANKAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRALKTFVADT--PEYERLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVWIP 122
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_PODAN (60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.658e-20 Identity = 52/121 (42.98%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 186 KAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVP 548 K+ K Y KL LLEEY I + + DNV S Q+ IR+ LR VVLMGKNTM++R ++ + + L+P ++GNVG +FT GDL APAR G VAP+DV +P Sbjct: 4 KSANKAGYFDKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRALKTFL--VDSPEYERLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPVDVWIP 122
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_PLAF8 (60S acidic ribosomal protein P0 OS=Plasmodium falciparum (isolate 7G8) GN=RPLP0 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 1.833e-19 Identity = 48/128 (37.50%), Postives = 79/128 (61.72%), Query Frame = 3 Query: 171 VVKASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGA-PARVGLVAPIDVVVPP 551 + K SK +KK Y KL L+++Y++IL+ DNVGS+Q+ ++R+ LRG + +LMGKNT ++ ++ + + L+PL++ N+G +F K DL + PAR+G++APIDV +PP Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKKNLQAVPQIE--KLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPIDVFIPP 126
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_YEAST (60S acidic ribosomal protein P0 OS=Saccharomyces cerevisiae GN=RPP0 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.457e-18 Identity = 52/118 (44.07%), Postives = 66/118 (55.93%), Query Frame = 3 Query: 192 EKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVV 545 EKK Y AKL + LEEY + V DNV S Q+ +R+ LRG +VVLMGKNTM++R IR + F L+P ++G VG +FT L APAR G VAP D+ V Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIRGFLSDLPD--FEKLLPFVKGYVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWV 121
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_SCHPO (60S acidic ribosomal protein P0 OS=Schizosaccharomyces pombe GN=rpp0 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.112e-16 Identity = 47/123 (38.21%), Postives = 65/123 (52.85%), Query Frame = 3 Query: 180 ASKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVP 548 A E K Y KL L E+Y + V DNV S Q+ +R+ LRG + ++MGKNTM++R +R L+P+++GNVG +FT DL APAR +AP+DV VP Sbjct: 2 AISKESKAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMRGIINDMPELE--RLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFVP 122
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_EIMTE (60S acidic ribosomal protein P0 OS=Eimeria tenella PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.606e-15 Identity = 47/120 (39.17%), Postives = 68/120 (56.67%), Query Frame = 3 Query: 189 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVP 548 A K+ Y +L QL+ E+ ++LV +AD+VGS QL IR LRG + VLMGKNT ++ +R ++ L+PL++ NVG IF + D APA+ G+ AP DV +P Sbjct: 6 AAKRREYFPRLLQLVLEHPRVLVVSADHVGSKQLAGIRVALRGQATVLMGKNTKIRTALRQQLQQ--QPQLQALLPLVRLNVGFIFCRADPAAVRAVVQQHKVPAPAKQGVTAPTDVFIP 123
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_DICDI (60S acidic ribosomal protein P0 OS=Dictyostelium discoideum GN=rplp0 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 3.955e-14 Identity = 45/120 (37.50%), Postives = 67/120 (55.83%), Query Frame = 3 Query: 189 AEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLIPLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVP 548 +++K + K +L Y +++VA AD VGS QLQ IR+ +RG VLMGK TM+++ IR A+ LN L+ N +IF K ++ GAPA+ G+ AP DV++P Sbjct: 6 SKRKNVFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLADSKPELDALN--TYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIP 123
BLAST of FC925747 vs. ExPASy Swiss-Prot
Match: RLA0_TRYCR (60S acidic ribosomal protein P0 OS=Trypanosoma cruzi PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 5.165e-14 Identity = 46/129 (35.66%), Postives = 67/129 (51.94%), Query Frame = 3 Query: 183 SKAEKKIAYDAKLCQLLEEYTQILVAAADNVGSHQLQNIRRGLRGDSVVLMGKNTMMKRTIRMHAEKTGNTAFLNLI-------PLLQGNVGLIFTKGDLXXXXXXXXXXXXGAPARVGLVAPIDVVVP 548 S +E K Y+ + L +Y ++L DNV S Q+ ++RR LRG ++MGK T+ K+ + AE +A+ L+ LL GN LIFT ++ APARVG +AP DV+VP Sbjct: 3 SVSEAKREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRAEDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVP 131 The following BLAST results are available for this feature:
BLAST of FC925747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925747 ID=FC925747; Name=FC925747; organism=Citrus clementina; type=EST; length=557bpback to top |