FC925762

Overview
NameFC925762
Unique NameFC925762
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length752
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925762 vs. ExPASy Swiss-Prot
Match: TMX3_HUMAN (Protein disulfide-isomerase TMX3 OS=Homo sapiens GN=TMX3 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.842e-16
Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 3
Query:  138 DNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKS-VLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVK 452
            D   KE   D   LV+FYAPWCGHCKKL P + ++G   K   S V +GK+D   + S+ S++GV+GYPTI+   KG L    Y GPR+ + + E+ +   G  ++
Sbjct:   32 DESFKENRNDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLL-KGDL-AYNYRGPRTKDDIIEFAHRVSGALIR 135          
BLAST of FC925762 vs. ExPASy Swiss-Prot
Match: TMX3_MOUSE (Protein disulfide-isomerase TMX3 OS=Mus musculus GN=Tmx3 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.193e-15
Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 3
Query:  177 LVEFYAPWCGHCKKLAPEYEKLGASFKKAKS-VLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVK 452
            LV+FYAPWCGHCKKL P + ++G   K   S V +GK+D   + S+ S++GV+GYPTI+   KG L    Y GPR+ + + E+ +   G  ++
Sbjct:   48 LVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLL-KGDL-AYNYRGPRTKDDIIEFAHRVSGALIR 138          
BLAST of FC925762 vs. ExPASy Swiss-Prot
Match: ERP44_BOVIN (Endoplasmic reticulum resident protein ERp44 OS=Bos taurus GN=ERP44 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.212e-14
Identity = 36/121 (29.75%), Postives = 64/121 (52.89%), Query Frame = 3
Query:   84 LTLFFVSALADDVVVLTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKK----AKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNE 434
            L  +  + +  +++ L  +N +  +     ALV FYA WC   + L P +E+     K+    A  V+  +VDCD+H  +  +Y +  YPT++ F  G +  ++Y G RS +ALA+Y+  +
Sbjct:   19 LVTWVFTPVTAEIISLDTENIDDILNNADVALVNFYADWCRFSQMLHPIFEEASNVIKEEYPNANQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQ 139          
BLAST of FC925762 vs. ExPASy Swiss-Prot
Match: ERP44_HUMAN (Endoplasmic reticulum resident protein ERp44 OS=Homo sapiens GN=ERP44 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.203e-13
Identity = 41/159 (25.79%), Postives = 77/159 (48.43%), Query Frame = 3
Query:   84 LTLFFVSALADDVVVLTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEK----LGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVVLTADNFDEIVLDKSKDVLVEFY 548
            L  +  + +  ++  L  +N ++ +     ALV FYA WC   + L P +E+    +   F     V+  +VDCD+H  +  +Y +  YPT++ F  G +  ++Y G RS +ALA+Y+  +           S+ +    D  +   LD+SK  ++ ++
Sbjct:   19 LVTWVFTPVTTEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQ----------KSDPIQEIRDLAEITTLDRSKRNIIGYF 167          

HSP 2 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 37/100 (37.00%), Postives = 55/100 (55.00%), Query Frame = 3
Query:  462 VPSNVVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEK----VAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKNGEEYGG 749
            V + +  L  +N DEI L+ +   LV FYA WC   + L P +E+    +   F  E+ VV A +D D++ D+A++Y +S +PTLK F  G     EY G
Sbjct:   27 VTTEITSLDTENIDEI-LNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRG 125          
BLAST of FC925762 vs. ExPASy Swiss-Prot
Match: ERP44_MOUSE (Endoplasmic reticulum resident protein ERp44 OS=Mus musculus GN=Erp44 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.052e-13
Identity = 41/149 (27.52%), Postives = 73/149 (48.99%), Query Frame = 3
Query:  117 DVVVLTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKA----KSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVVLTADNFDEIV-LDKSKDVLVEFY 548
            ++  L  +N ++ +     ALV FYA WC   + L P +E+     K+       V+  +VDCD+H  +  +Y +  YPT++ F  G +  ++Y G RS +ALA+Y+  +    V               + DE+  LD+SK  ++ ++
Sbjct:   30 EIASLDSENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEYPDKNQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSNPVH-----------EIQSLDEVTNLDRSKRNIIGYF 167          
BLAST of FC925762 vs. ExPASy Swiss-Prot
Match: BS2_TRYBB (Bloodstream-specific protein 2 OS=Trypanosoma brucei brucei GN=BS2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.680e-13
Identity = 45/137 (32.85%), Postives = 73/137 (53.28%), Query Frame = 3
Query:  129 LTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNVVVLTADNFDEIVLDKSKDVLV 539
            LT++NF + + +    LV+FY   CG+C+ LAPE+EK  A+ +   + L+G+VDC     L + + ++GYPTI  F  G  E + Y G R+ + + +Y+      NV  A  P       A N +E+   K +  +V
Sbjct:   24 LTKENFNETIAKSEIFLVKFYVDTCGYCQMLAPEWEK--AANETIDNALMGEVDCHSQPELAANFSIRGYPTIILFRNGK-EAEHYGGARTKDDIIKYIK----ANVGPAVTP-------ASNAEEVTRAKEEHDVV 146          

HSP 2 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 34/72 (47.22%), Postives = 46/72 (63.89%), Query Frame = 3
Query:  513 LDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNK 728
            L   KD+L+ F+APWCGHCKN APT++K+A  F    D++VA LDA      +  + V+ FPT+ F P G K
Sbjct:  363 LTSGKDMLILFFAPWCGHCKNFAPTFDKIAKEFD-ATDLIVAELDATANYVNSSTFTVTAFPTVFFVPNGGK 433          

HSP 3 Score: 72.4034 bits (176), Expect = 2.963e-12
Identity = 37/121 (30.58%), Postives = 63/121 (52.07%), Query Frame = 3
Query:  114 DDVVVLTEDNFEKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYEGPRSAEALAEYVNNEGGTNVKIAAVPSNV 476
            D    +     +K +   +  L+ F+APWCGHCK  AP ++K+   F  A  +++ ++D   +    S + V  +PT+ + P G  +P  +EG RS E + E+V     T  K++  P+NV
Sbjct:  349 DGKTTIVAKTMQKHLTSGKDMLILFFAPWCGHCKNFAPTFDKIAKEF-DATDLIVAELDATANYVNSSTFTVTAFPTVFFVPNGG-KPVVFEGERSFENVYEFVRKH-VTTFKVSEKPANV 466          
BLAST of FC925762 vs. ExPASy Swiss-Prot
Match: TXND_THEPA (Thioredoxin domain-containing protein OS=Theileria parva GN=TP02_0602 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13
Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = 3
Query:  120 VVVLTEDNFEKEVGQDRGA-----LVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKKYE-GPRSAEALAEY 422
            +V+L E NFEK      GA      V+FYAPWC HC+K+AP +E L  + K    V +  VD   + +L  ++ ++GYPT+  F KG +   +YE G R+ E L+E+
Sbjct:   32 LVLLNEKNFEKLTQASTGATTGTWFVKFYAPWCSHCRKMAPAWESLAKALK--GQVNVADVDVTRNLNLGKRFQIRGYPTLLLFHKGKM--YQYEGGERTVEKLSEF 134          

HSP 2 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 38/107 (35.51%), Postives = 60/107 (56.07%), Query Frame = 3
Query:  441 TNVKIAAVPSN-VVVLTADNFDEIVLDKSKDV----LVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKNGEEYG 746
            TNVK+     N +V+L   NF+++    +        V+FYAPWC HC+ +AP +E +A A  L+  V VA++D  +  +L +++ + G+PTL  F KG     E G
Sbjct:   20 TNVKLDREDQNHLVLLNEKNFEKLTQASTGATTGTWFVKFYAPWCSHCRKMAPAWESLAKA--LKGQVNVADVDVTRNLNLGKRFQIRGYPTLLLFHKGKMYQYEGG 124          
BLAST of FC925762 vs. ExPASy Swiss-Prot
Match: MPD1_YEAST (Protein disulfide-isomerase MPD1 OS=Saccharomyces cerevisiae GN=MPD1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13
Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 3
Query:  483 LTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFF 713
            LT  +FD+ + + +   LVEFYAPWCGHCK L+ T+ K A        V   N D +K K L  KY V+GFPTL  F
Sbjct:   34 LTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVF 110          

HSP 2 Score: 71.2478 bits (173), Expect = 6.601e-12
Identity = 56/213 (26.29%), Postives = 86/213 (40.38%), Query Frame = 3
Query:  129 LTEDNFEKEV-GQDRGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIGKVDCDEHKSLCSKYGVQGYPTIQWFPKGSLEPKK----------------YEGPRSAEALAEYVNNEGGTNV-KIAAVPSNVVVLTADNFDEIVL----DKSKDVLVEFYAPWCG-------------HCKNLAPTYEKVAAAFTLEDDVVVANLDADKYK 662
            LT  +F+K +   +  +LVEFYAPWCGHCKKL+  + K          V     D +++K+LC+KY V G+PT+  F    ++  K                Y G R+   + ++  +   + V K   + +   +L       +VL    DK   V       W G                ++ PTYEK    F     V+     +DK K
Sbjct:   34 LTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVLFSKQDKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSK 246          
BLAST of FC925762 vs. ExPASy Swiss-Prot
Match: PDI_ALTAL (Protein disulfide-isomerase (Fragment) OS=Alternaria alternata PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.269e-12
Identity = 46/135 (34.07%), Postives = 72/135 (53.33%), Query Frame = 3
Query:  345 IQWFPKGSLEPKKYEGPRSAEALAEYVNN----EGGTNVKIAAVPSN----VVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVA---AAFTLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFP 716
            IQ   K    P   E   + + + ++V++    +   ++K   +P +    V V+ A N+ ++V+D  KDVLVEFYAPWCGHCK LAP YE++    A+  L   V +A +DA    D+ ++  + GF     FP
Sbjct:  187 IQRTEKNEKFPTNQEAKITEKEIGKFVDDFLAGKIDPSIKSEPIPESNDGPVTVVVAHNYKDVVIDNDKDVLVEFYAPWCGHCKALAPKYEELGQLYASDELSKLVTIAKVDA-TLNDVPDE--IQGFLPSSLFP 318          
BLAST of FC925762 vs. ExPASy Swiss-Prot
Match: EUG1_YEAST (Protein disulfide-isomerase EUG1 OS=Saccharomyces cerevisiae GN=EUG1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.055e-12
Identity = 45/147 (30.61%), Postives = 74/147 (50.34%), Query Frame = 3
Query:  318 KYGVQGYPTIQWFPKGSLE-PKKYEGPRSAEALAEYVNNEGGTNVKIAAVP----SNVVVLTADNFDEIVLDKSKDVLVEFYAPWCGHCKNLAPTYEKVAAAF----TLEDDVVVANLDADKYKDLAEKYGVSGFPTLKFFPKGNKN 731
            KYG+   P  ++     LE P+  +     + + +Y        VK   +P    SNV  +     D+IV D  KDVLV++YA WC H K  AP YE++A       ++ D +++A +D+     L+  + V+G+PT+  +P GN +
Sbjct:  323 KYGLPQLPEEEY---AKLEKPQPLDRDMIVQLVKDYREGTAKPIVKSEEIPKEQKSNVYKIVGKTHDDIVHDDDKDVLVKYYATWCIHSKRFAPIYEEIANVLASDESVRDKILIAEVDSGANDILS--FPVTGYPTIALYPAGNNS 464          
The following BLAST results are available for this feature:
BLAST of FC925762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
TMX3_HUMAN9.842e-1641.51Protein disulfide-isomerase TMX3 OS=Homo sapiens G... [more]
TMX3_MOUSE2.193e-1543.01Protein disulfide-isomerase TMX3 OS=Mus musculus G... [more]
ERP44_BOVIN9.212e-1429.75Endoplasmic reticulum resident protein ERp44 OS=Bo... [more]
ERP44_HUMAN1.203e-1325.79Endoplasmic reticulum resident protein ERp44 OS=Ho... [more]
ERP44_MOUSE2.052e-1327.52Endoplasmic reticulum resident protein ERp44 OS=Mu... [more]
BS2_TRYBB2.680e-1332.85Bloodstream-specific protein 2 OS=Trypanosoma bruc... [more]
TXND_THEPA5.971e-1339.25Thioredoxin domain-containing protein OS=Theileria... [more]
MPD1_YEAST5.971e-1346.75Protein disulfide-isomerase MPD1 OS=Saccharomyces ... [more]
PDI_ALTAL2.269e-1234.07Protein disulfide-isomerase (Fragment) OS=Alternar... [more]
EUG1_YEAST5.055e-1230.61Protein disulfide-isomerase EUG1 OS=Saccharomyces ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP8YP01FM1 TF Citrus clementina cDNA clone KN0AAP8YP01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925762 ID=FC925762; Name=FC925762; organism=Citrus clementina; type=EST; length=752bp
CCAAAATACCTGCACAGGGGGAAAAAAAAAAAATAAGAAAGAGAGAAATG
GAGAGGTATCAGATCTGGCTAGCTCTAGGCACTTTAACCTTGTTCTTCGT
ATCAGCTCTAGCGGACGATGTCGTTGTGCTAACAGAAGACAACTTCGAGA
AGGAGGTTGGTCAGGACAGGGGAGCTCTTGTTGAGTTTTACGCTCCTTGG
TGTGGCCACTGTAAAAAGCTTGCTCCAGAGTATGAGAAACTTGGTGCAAG
CTTTAAGAAAGCAAAGTCTGTCTTGATTGGAAAGGTGGACTGTGACGAGC
ATAAGAGCTTATGCAGCAAATATGGTGTTCAAGGATACCCAACAATTCAA
TGGTTTCCTAAAGGTTCTTTGGAACCCAAAAAGTATGAAGGGCCACGATC
TGCTGAAGCCCTTGCTGAGTATGTGAATAATGAAGGAGGAACCAATGTGA
AGATAGCTGCAGTCCCATCCAATGTGGTGGTACTAACAGCTGATAATTTT
GATGAGATAGTTTTGGACAAAAGCAAAGATGTTTTGGTTGAATTTTATGC
ACCATGGTGTGGCCATTGCAAAAACCTTGCGCCTACATATGAAAAGGTGG
CAGCCGCATTTACATTGGAAGATGATGTAGTTGTTGCTAATTTGGATGCT
GACAAATACAAGGATCTGGCTGAGAAGTATGGAGTTAGTGGATTTCCTAC
ATTGAAGTTCTTTCCAAAAGGCAACAAAAATGGTGAGGAATATGGGGGGT
GG
back to top