FC925772

Overview
NameFC925772
Unique NameFC925772
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC925772 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFT (Adenosylhomocysteinase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.122e-35
Identity = 62/111 (55.86%), Postives = 79/111 (71.17%), Query Frame = 3 
Query:  105 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEY 437
            +++    +K+ D+S AD+GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDH              WKGETL+EY
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEY 116

HSP 2 Score: 36.965 bits (84), Expect = 3.122e-35
Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 2 
Query:  488 DLIVDDGGDATLLIHEGVKAE 550
            +LIVDDGGDATLLIH+G + E
Sbjct:  137 ELIVDDGGDATLLIHKGYELE 157
[Close]
BLAST of FC925772 vs. ExPASy Swiss-Prot
Match: SAHH_XYLF2 (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M23) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.122e-35
Identity = 62/111 (55.86%), Postives = 79/111 (71.17%), Query Frame = 3 
Query:  105 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEY 437
            +++    +K+ D+S AD+GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDH              WKGETL+EY
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEY 116

HSP 2 Score: 36.965 bits (84), Expect = 3.122e-35
Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 2 
Query:  488 DLIVDDGGDATLLIHEGVKAE 550
            +LIVDDGGDATLLIH+G + E
Sbjct:  137 ELIVDDGGDATLLIHKGYELE 157
[Close]
BLAST of FC925772 vs. ExPASy Swiss-Prot
Match: SAHH_METCA (Adenosylhomocysteinase OS=Methylococcus capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.122e-35
Identity = 72/126 (57.14%), Postives = 83/126 (65.87%), Query Frame = 3 
Query:   96 SVQKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYL-VVHGESPWTG 470
            +V  +AS  + KV DLS A +GR EI +AE EMPGLMA R E+  +QP KGA+I GSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH              +KGE+L +Y    H    W G
Sbjct:    3 AVANAASFDDHKVADLSLAGWGRKEIAIAETEMPGLMAIREEYRAAQPLKGARIAGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAADGIPVFAYKGESLDDYWEYTHRILEWPG 128

HSP 2 Score: 36.1946 bits (82), Expect = 3.122e-35
Identity = 15/31 (48.39%), Postives = 22/31 (70.97%), Query Frame = 2 
Query:  461 LDWXXXXXXDLIVDDGGDATLLIHEGVKAEE 553
            L+W      ++I+DDGGDATLL+  G +AE+
Sbjct:  124 LEWPGDVGPNMILDDGGDATLLVTLGARAEK 154
[Close]
BLAST of FC925772 vs. ExPASy Swiss-Prot
Match: SAHH_MESSB (Adenosylhomocysteinase OS=Mesorhizobium sp. (strain BNC1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.068e-35
Identity = 69/105 (65.71%), Postives = 79/105 (75.24%), Query Frame = 3 
Query:  123 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEY 437
            ++ V D+S A +GR EIE+AE EMPGLMACR EFG ++P KGA+ITGSLHMTIQTAVLIETL +LGAEVRW SCNIFSTQDH               KGETL+EY
Sbjct:    5 DYVVADMSLAAWGRKEIEIAETEMPGLMACREEFGEAKPLKGARITGSLHMTIQTAVLIETLKSLGAEVRWASCNIFSTQDHAAAAIAETGTPVFAVKGETLEEY 109

HSP 2 Score: 30.8018 bits (68), Expect = 4.068e-35
Identity = 13/28 (46.43%), Postives = 18/28 (64.29%), Query Frame = 2 
Query:  467 WXXXXXXDLIVDDGGDATLLIHEGVKAE 550
            W      ++I+DDGGDAT+ I  G +AE
Sbjct:  119 WPDGQPSNMILDDGGDATMYILLGARAE 146
[Close]
BLAST of FC925772 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSS (Adenosylhomocysteinase OS=Mycobacterium sp. (strain MCS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.295e-35
Identity = 74/135 (54.81%), Postives = 85/135 (62.96%), Query Frame = 3 
Query:  105 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEY-LVVHGESPWTGVPA 479
            +S +G ++KV DLS A+FGR EI LAE EMPGLMA R E+    P KGA+I+GSLHMT+QTAVLIETL +LGAEVRW SCNIFSTQDH                       WKGETL+EY         W G PA
Sbjct:   11 ESRNGIDYKVADLSLAEFGRKEIRLAEHEMPGLMALRREYAEVAPLKGARISGSLHMTVQTAVLIETLVSLGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGTPVFAWKGETLEEYWWAAEQMLTWPGEPA 145

HSP 2 Score: 34.2686 bits (77), Expect = 5.295e-35
Identity = 15/43 (34.88%), Postives = 28/43 (65.12%), Query Frame = 2 
Query:  488 DLIVDDGGDATLLIHEGVKAEEIYQKTGKLPDPALTDNAQFPI 616
            ++I+DDGGDAT+L+  G +    ++K G +P     D+A++ +
Sbjct:  146 NMILDDGGDATMLVLRGAQ----FEKAGVVPPAEDDDSAEYKV 184
[Close]
BLAST of FC925772 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSK (Adenosylhomocysteinase OS=Mycobacterium sp. (strain KMS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.295e-35
Identity = 74/135 (54.81%), Postives = 85/135 (62.96%), Query Frame = 3 
Query:  105 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEY-LVVHGESPWTGVPA 479
            +S +G ++KV DLS A+FGR EI LAE EMPGLMA R E+    P KGA+I+GSLHMT+QTAVLIETL +LGAEVRW SCNIFSTQDH                       WKGETL+EY         W G PA
Sbjct:   11 ESRNGIDYKVADLSLAEFGRKEIRLAEHEMPGLMALRREYAEVAPLKGARISGSLHMTVQTAVLIETLVSLGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGTPVFAWKGETLEEYWWAAEQMLTWPGEPA 145

HSP 2 Score: 34.2686 bits (77), Expect = 5.295e-35
Identity = 15/43 (34.88%), Postives = 28/43 (65.12%), Query Frame = 2 
Query:  488 DLIVDDGGDATLLIHEGVKAEEIYQKTGKLPDPALTDNAQFPI 616
            ++I+DDGGDAT+L+  G +    ++K G +P     D+A++ +
Sbjct:  146 NMILDDGGDATMLVLRGAQ----FEKAGVVPPAEDDDSAEYKV 184
[Close]
BLAST of FC925772 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSJ (Adenosylhomocysteinase OS=Mycobacterium sp. (strain JLS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.295e-35
Identity = 74/135 (54.81%), Postives = 85/135 (62.96%), Query Frame = 3 
Query:  105 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEY-LVVHGESPWTGVPA 479
            +S +G ++KV DLS A+FGR EI LAE EMPGLMA R E+    P KGA+I+GSLHMT+QTAVLIETL +LGAEVRW SCNIFSTQDH                       WKGETL+EY         W G PA
Sbjct:   11 ESRNGIDYKVADLSLAEFGRKEIRLAEHEMPGLMALRREYAEVAPLKGARISGSLHMTVQTAVLIETLVSLGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGTPVFAWKGETLEEYWWAAEQMLTWPGEPA 145

HSP 2 Score: 34.2686 bits (77), Expect = 5.295e-35
Identity = 15/43 (34.88%), Postives = 28/43 (65.12%), Query Frame = 2 
Query:  488 DLIVDDGGDATLLIHEGVKAEEIYQKTGKLPDPALTDNAQFPI 616
            ++I+DDGGDAT+L+  G +    ++K G +P     D+A++ +
Sbjct:  146 NMILDDGGDATMLVLRGAQ----FEKAGVVPPAEDDDSAEYKV 184
[Close]
BLAST of FC925772 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFM (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M12) GN=ahcY PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.296e-35
Identity = 62/111 (55.86%), Postives = 78/111 (70.27%), Query Frame = 3 
Query:  105 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEY 437
            +++    +K+ D+S AD+GR EI++AE EMPGLM+ R ++   QP KG ++TGSLHMTIQTAVLIETL  +GA VRW SCNIFSTQDH              WKGETL+EY
Sbjct:    6 QTSPNTHYKIADISLADWGRKEIDIAEHEMPGLMSIRRKYASKQPLKGVRVTGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQDHAAAAIATSGTPVFAWKGETLEEY 116

HSP 2 Score: 36.965 bits (84), Expect = 5.296e-35
Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 2 
Query:  488 DLIVDDGGDATLLIHEGVKAE 550
            +LIVDDGGDATLLIH+G + E
Sbjct:  137 ELIVDDGGDATLLIHKGYELE 157
[Close]
BLAST of FC925772 vs. ExPASy Swiss-Prot
Match: SAHH_BORPD (Adenosylhomocysteinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=ahcY PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 5.297e-35
Identity = 66/105 (62.86%), Postives = 74/105 (70.48%), Query Frame = 3 
Query:  123 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEY 437
            ++ V D+S A +GR E+ +AE EMPGLMA R EF  SQP KGA+I GSLHMTIQT VLIETL ALGAEVRW SCNIFSTQDH               KGETL+EY
Sbjct:   11 DYHVADMSLAAWGRRELAIAETEMPGLMAIREEFAASQPLKGARIAGSLHMTIQTGVLIETLVALGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEY 115

HSP 2 Score: 38.5058 bits (88), Expect = 5.297e-35
Identity = 15/30 (50.00%), Postives = 22/30 (73.33%), Query Frame = 2 
Query:  464 DWXXXXXXDLIVDDGGDATLLIHEGVKAEE 553
            +W      ++I+DDGGDATLL+H G +AE+
Sbjct:  124 EWPEGRHANMILDDGGDATLLLHLGARAEQ 153
[Close]
BLAST of FC925772 vs. ExPASy Swiss-Prot
Match: SAHH_CHLTE (Adenosylhomocysteinase OS=Chlorobium tepidum GN=ahcY PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 5.297e-35
Identity = 64/105 (60.95%), Postives = 75/105 (71.43%), Query Frame = 3 
Query:  123 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEY 437
            ++KV D+S A++GR EIE+AE EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH              WKGETL EY
Sbjct:    9 DYKVADISLAEWGRKEIEIAEKEMPGLMATRKKYEGKKPLAGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLDEY 113

HSP 2 Score: 38.5058 bits (88), Expect = 5.297e-35
Identity = 21/46 (45.65%), Postives = 26/46 (56.52%), Query Frame = 2 
Query:  452 RKPLDWXXXXXXDLIVDDGGDATLLIHEGVKAEEIYQKTGKLPDPA 589
            R+ L++      +LIVDDGGDATL+IH G K E       K P  A
Sbjct:  118 RQILEFEGGLGPNLIVDDGGDATLMIHFGYKIENDPSMLDKTPGNA 163
The following BLAST results are available for this feature:
BLAST of FC925772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
SAHH_XYLFT3.122e-3555.86Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_XYLF23.122e-3555.86Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_METCA3.122e-3557.14Adenosylhomocysteinase OS=Methylococcus capsulatus... [more]
SAHH_MESSB4.068e-3565.71Adenosylhomocysteinase OS=Mesorhizobium sp. (strai... [more]
SAHH_MYCSS5.295e-3554.81Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_MYCSK5.295e-3554.81Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_MYCSJ5.295e-3554.81Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_XYLFM5.296e-3555.86Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_BORPD5.297e-3562.86Adenosylhomocysteinase OS=Bordetella petrii (strai... [more]
SAHH_CHLTE5.297e-3560.95Adenosylhomocysteinase OS=Chlorobium tepidum GN=ah... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YK12FM1 TF Citrus clementina cDNA clone KN0AAP11YK12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925772 ID=FC925772; Name=FC925772; organism=Citrus clementina; type=EST; length=618bp
CACTTTGTTTGGTTTTTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCT
TCTTCCTTTTAGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGT
CCAGAAATCCGCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGG
CTGACTTCGGCCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGG
CTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGC
CAAGATCACCGGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCG
AGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATC
TTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTC
CGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTACCTGGTGGTGCACG
GAGAAAGCCCCTGGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCG
ATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAG
GAGATCTACCAGAAGACCGGGAAGTTGCCCGACCCGGCCCTCACCGACAA
CGCCCAGTTTCCGATTGT
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