FC925777

Overview
NameFC925777
Unique NameFC925777
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_THEVO (Elongation factor 2 OS=Thermoplasma volcanium GN=fusA PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.400e-41
Identity = 85/186 (45.70%), Postives = 126/186 (67.74%), Query Frame = 1
Query:   46 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY 603
            E+  RI++    +RN+ ++AH+DHGK+TL+D+L+A AG++++E+AG   + D  + E  RGITI            +AA+ S     QG EYLINLID+PGHVDF  +VT A+R  DG +VVVD +EGV  QTETV+RQAL E ++PVL +NK+DR   EL+++ +E  + F K+I + N +++ Y
Sbjct:    9 EKALRIVEHTELVRNIGIVAHIDHGKTTLSDNLIAGAGMMSEELAGKQLVLDYDEQEQARGITI------------NAAVASMVHAFQGKEYLINLIDTPGHVDFGGDVTRAMRAVDGVIVVVDSVEGVMPQTETVIRQALREYVKPVLFINKIDRLINELRLNSDEMQKRFTKIISDVNKLISKY 182          
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_METM6 (Elongation factor 2 OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=fusA PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.400e-41
Identity = 87/183 (47.54%), Postives = 123/183 (67.21%), Query Frame = 1
Query:   46 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIM 594
            E+++ +M+    IRNM + AH+DHGK+TL+D+L+A AG+I++E+AGD    D  ++EA RGITI +  +S+ +E              G EYLINLID+PGHVDF  +VT A+R  DGA+VV   +EGV  QTETVLRQAL E+++PVL +NK+DR   EL++  EE    F K+I   N ++
Sbjct:    9 EKVKTLMEKHDQIRNMGICAHIDHGKTTLSDNLLAGAGMISKELAGDQLALDFDEEEAARGITIYAANVSMVHEYN------------GKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQALKEKVKPVLFINKVDRLINELKLTPEELQGRFMKIIAEVNKLI 179          
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_METJA (Elongation factor 2 OS=Methanocaldococcus jannaschii GN=fusA PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.400e-41
Identity = 86/179 (48.04%), Postives = 124/179 (69.27%), Query Frame = 1
Query:   49 ELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENAN 585
            +++ +M+    IRN+ + AH+DHGK+TL+D+L+A AG+I++E+AG+    D  ++EA+RGITI +  +S+ +              +GNEYLINLID+PGHVDF  +VT A+R  DGA+VVV  +EGV  QTETVLRQAL ER++PVL +NK+DR   EL++  EE    F K+I + N
Sbjct:   10 KIKELMEKYDRIRNIGICAHIDHGKTTLSDNLLAGAGMISKELAGEQLALDFDEEEAQRGITIFAANVSMVHTY------------EGNEYLINLIDTPGHVDFGGDVTRAMRAIDGAIVVVCAVEGVMPQTETVLRQALRERVKPVLFINKVDRLINELKLTPEELQSRFIKIINDIN 176          
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_METM5 (Elongation factor 2 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=fusA PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.828e-41
Identity = 87/183 (47.54%), Postives = 123/183 (67.21%), Query Frame = 1
Query:   46 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIM 594
            E+++ +M+    IRNM + AH+DHGK+TL+D+L+A AG+I++E+AGD    D  ++EA RGITI +  +S+ +E              G EYLINLID+PGHVDF  +VT A+R  DGA+VV   +EGV  QTETVLRQAL E+++PVL +NK+DR   EL++  EE    F K+I   N ++
Sbjct:    9 EKVKTLMETHDQIRNMGICAHIDHGKTTLSDNLLAGAGMISKELAGDQLALDFDEEEAARGITIYAANVSMVHEYG------------GKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQALKEKVKPVLFINKVDRLINELKLTPEELQGRFMKIIAEVNKLI 179          
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_THEAC (Elongation factor 2 OS=Thermoplasma acidophilum GN=fusA PE=3 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.388e-41
Identity = 85/186 (45.70%), Postives = 126/186 (67.74%), Query Frame = 1
Query:   46 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIMATY 603
            E+  +I++    IRN+ ++AH+DHGK+TL+D+L+A AG++++E+AG   + D  + E  RGITI            +AA+ S     QG EYLINLID+PGHVDF  +VT A+R  DG +VVVD +EGV  QTETV+RQAL E ++PVL +NK+DR   EL+++ +E  + F K+I + N +++ Y
Sbjct:    9 EKALKIVEHTELIRNIGIVAHIDHGKTTLSDNLIAGAGMMSEELAGKQLVLDYDEQEQARGITI------------NAAVASMVHTFQGKEYLINLIDTPGHVDFGGDVTRAMRAVDGVIVVVDSVEGVMPQTETVIRQALREHVKPVLFINKIDRLINELRLNSDEMQKRFTKIITDVNRLISKY 182          
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_METVS (Elongation factor 2 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=fusA PE=3 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 2.388e-41
Identity = 86/183 (46.99%), Postives = 123/183 (67.21%), Query Frame = 1
Query:   46 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIM 594
            E+++ +M+    IRNM + AH+DHGK+TL+D+L+A AG+I++++AGD    D  ++EA RGITI +  +S+ +E              G EYLINLID+PGHVDF  +VT A+R  DGA+VV   +EGV  QTETVLRQAL E+++PVL +NK+DR   EL++  EE    F K+I   N ++
Sbjct:    9 EKVKSLMETHDQIRNMGICAHIDHGKTTLSDNLLAGAGMISKDLAGDQLALDFDEEEAARGITIYAANVSMVHEYN------------GKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQALKEKVKPVLFINKVDRLINELKLTPEELQGRFMKIIAEVNKLI 179          
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_METM7 (Elongation factor 2 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=fusA PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.388e-41
Identity = 87/183 (47.54%), Postives = 123/183 (67.21%), Query Frame = 1
Query:   46 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIM 594
            E+++ +M+    IRNM + AH+DHGK+TL+D+L+A AG+I++E+AGD    D  ++EA RGITI +  +S+ +E              G EYLINLID+PGHVDF  +VT A+R  DGA+VV   +EGV  QTETVLRQAL E+++PVL +NK+DR   EL++  EE    F K+I   N ++
Sbjct:    9 EKVKTLMEKHDQIRNMGICAHIDHGKTTLSDNLLAGAGMISKELAGDQLALDFDEEEAARGITIYAANVSMVHEYG------------GKEYLINLIDTPGHVDFGGDVTRAMRAIDGAVVVCCAVEGVMPQTETVLRQALKEKVKPVLFINKVDRLINELKLTPEELQGRFMKIIAEVNKLI 179          
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_METPE (Elongation factor 2 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=fusA PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.119e-41
Identity = 92/208 (44.23%), Postives = 131/208 (62.98%), Query Frame = 1
Query:   34 KFTAEELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENAN-VIMATYEDPLLGHVQVYPEKGTV 654
            K   + +  +M  P  IRN+ ++AH+DHGK+TL+D+L++ AG+I++E+AG     D+  +E  RGITI ++ +S+ +E             +G EYLIN+ID+PGHVDF  +VT A+R  DGA+VVVD +EG   QTETVLRQAL E++ PVL +NK+DR   EL+VD  E      KVI+  N +I    ED      ++   KGTV
Sbjct:    5 KKMVDRVSELMSQPKFIRNIGIVAHIDHGKTTLSDNLLSGAGMISEELAGRQLFMDSDAEEQARGITIDASNVSMVHEY------------EGQEYLINMIDTPGHVDFGGDVTRAMRAVDGAVVVVDAVEGTMPQTETVLRQALKEQVVPVLFINKVDRLINELKVDEMEMQVRLAKVIDKVNKLIKGMNEDMYNNGWKLDAAKGTV 200          
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_ARCFU (Elongation factor 2 OS=Archaeoglobus fulgidus GN=fusA PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.119e-41
Identity = 84/183 (45.90%), Postives = 123/183 (67.21%), Query Frame = 1
Query:   46 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIM 594
            ++++ +M  P  IRN+ ++AH+DHGK+TL+D+L+A AG+I++E+AG     D  + E ERGITI +  +S+ +E             +G +YLINLID+PGHVDF  +VT A+R  DG +VVVD +EGV  QTETVLRQAL E ++PVL VNK+DR   EL++  ++  +   KVI   N ++
Sbjct:    8 DKIKELMWKPKFIRNIGIVAHIDHGKTTLSDNLLAGAGMISEELAGQQLYLDFDEQEQERGITINAANVSMVHEY------------EGQDYLINLIDTPGHVDFGGDVTRAMRAVDGVIVVVDAVEGVMPQTETVLRQALKENVKPVLFVNKVDRLIKELELTPQQMQERLIKVITEVNKLI 178          
BLAST of FC925777 vs. ExPASy Swiss-Prot
Match: EF2_META3 (Elongation factor 2 OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=fusA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.073e-41
Identity = 84/183 (45.90%), Postives = 125/183 (68.31%), Query Frame = 1
Query:   46 EELRRIMDFPHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRQDEAERGITIKSTGISLYYEMTDAALKSFKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQKVIENANVIM 594
            E++  +M+    IRN+ + AH+DHGK+TL+D+L+A AG+I++++AGD    D  ++EAERGITI +  +S+ +E             QG  +LINLID+PGHVDF  +VT A+R  DGA+VVV  +EG+  QTETVLRQAL E+++P+L +NK+DR   EL++  EE    F K+I + N ++
Sbjct:    9 EQVVSLMETHDQIRNIGICAHIDHGKTTLSDNLLAGAGMISKDLAGDQLALDFDEEEAERGITIYAANVSMVHEC------------QGKPHLINLIDTPGHVDFGGDVTRAMRAIDGAVVVVCAVEGIMPQTETVLRQALKEKVKPILFINKVDRLLNELKLTPEELQNRFMKIIADVNKLI 179          
The following BLAST results are available for this feature:
BLAST of FC925777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF2_THEVO1.400e-4145.70Elongation factor 2 OS=Thermoplasma volcanium GN=f... [more]
EF2_METM61.400e-4147.54Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_METJA1.400e-4148.04Elongation factor 2 OS=Methanocaldococcus jannasch... [more]
EF2_METM51.828e-4147.54Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_THEAC2.388e-4145.70Elongation factor 2 OS=Thermoplasma acidophilum GN... [more]
EF2_METVS2.388e-4146.99Elongation factor 2 OS=Methanococcus vannielii (st... [more]
EF2_METM72.388e-4147.54Elongation factor 2 OS=Methanococcus maripaludis (... [more]
EF2_METPE3.119e-4144.23Elongation factor 2 OS=Methanosphaerula palustris ... [more]
EF2_ARCFU3.119e-4145.90Elongation factor 2 OS=Archaeoglobus fulgidus GN=f... [more]
EF2_META34.073e-4145.90Elongation factor 2 OS=Methanococcus aeolicus (str... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YK14FM1 TF Citrus clementina cDNA clone KN0AAP11YK14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925777 ID=FC925777; Name=FC925777; organism=Citrus clementina; type=EST; length=654bp
GTTGGTAATATTTGAGAATCAGTCAAGATGGTGAAGTTCACAGCAGAAGA
GCTCCGGCGTATTATGGACTTCCCACATAACATCCGCAATATGTCTGTTA
TTGCCCATGTTGATCATGGGAAGTCAACCCTTACCGACTCTCTTGTGGCT
GCTGCTGGTATTATCGCCCAAGAAGTTGCTGGCGATGTCCGTATGACAGA
TACTCGTCAGGATGAAGCTGAGCGTGGTATTACAATCAAGTCTACTGGTA
TATCTCTCTACTACGAGATGACTGATGCGGCTTTGAAGAGCTTCAAGGGA
GAGCGTCAAGGGAATGAATACCTCATCAACCTTATTGATTCCCCTGGGCA
CGTCGATTTCTCATCTGAGGTTACAGCTGCCCTTCGTATCACTGATGGTG
CACTTGTGGTCGTAGACTGCATTGAAGGTGTTTGTGTCCAAACAGAAACT
GTGCTTAGACAAGCCCTGGGTGAAAGGATTAGGCCAGTCTTGACTGTGAA
CAAGATGGACAGGTGCTTCCTTGAGCTTCAGGTTGACGGTGAAGAGGCTT
ACCAGACTTTCCAGAAAGTGATTGAGAATGCTAATGTCATTATGGCTACC
TATGAAGATCCCCTCCTTGGCCATGTTCAGGTTTACCCTGAAAAGGGAAC
AGTT
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