FC925780
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925780 vs. ExPASy Swiss-Prot
Match: ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.573e-43 Identity = 76/128 (59.38%), Postives = 107/128 (83.59%), Query Frame = 1 Query: 4 DDCLLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 387 D+ FLEL+ K+T+R++VFKI+E +K+V+VEK G PT++Y+DF ASLP +CRYAVYD+DFVT+ENCQKS+IFF AWSP T+ +R+K++Y++SKD+ REL GI E+QATDP+E+ L+V ++RAN Sbjct: 19 DESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLRERAN 146
BLAST of FC925780 vs. ExPASy Swiss-Prot
Match: ADF4_ORYSJ (Actin-depolymerizing factor 4 OS=Oryza sativa subsp. japonica GN=ADF4 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 3.504e-43 Identity = 78/127 (61.42%), Postives = 105/127 (82.68%), Query Frame = 1 Query: 1 HDDCLLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDR 381 HDDC LKF EL++KR +RFI F ++ K K++IV+K+G+ T +YEDF +SLP +CR+A+YD+DF+TAE+ KSRIF+I WSPD A+VRSKM+YASS +RFK+EL+GIQ+E+QATD E+ LD KDR Sbjct: 11 HDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALKDR 137
BLAST of FC925780 vs. ExPASy Swiss-Prot
Match: ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 5.977e-43 Identity = 71/127 (55.91%), Postives = 108/127 (85.04%), Query Frame = 1 Query: 7 DCLLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 387 +C FLEL+ K+++R+++FKI++K K+V+VEK G T++++DF SLP +CRYA+YD+DFVT ENCQKS+IFF+AWSP +R+R+KM+YA+SK+RF+RELDG+ E+QATDPSE+ +++ ++RA+ Sbjct: 19 ECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLRERAH 145
BLAST of FC925780 vs. ExPASy Swiss-Prot
Match: ADF3_MAIZE (Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.472e-41 Identity = 76/128 (59.38%), Postives = 106/128 (82.81%), Query Frame = 1 Query: 1 HDDCLLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 384 +D+C+LKF EL++KR +RFI FK+++K K+++V+++G+ +Y+DF SLP +CRYA+YD+DFVTAE+ QKSRIF+I WSP +A+V+SKM+YASS +FK L+GIQVELQATD SE+ LD KDRA Sbjct: 11 NDECMLKFGELQSKRLHRFITFKMDDKFKEIVVDQVGDRATSYDDFTNSLPENDCRYAIYDFDFVTAEDVQKSRIFYILWSPSSAKVKSKMLYASSNQKFKSGLNGIQVELQATDASEISLDEIKDRA 138
BLAST of FC925780 vs. ExPASy Swiss-Prot
Match: ADF5_ARATH (Actin-depolymerizing factor 5 OS=Arabidopsis thaliana GN=ADF5 PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 2.777e-40 Identity = 70/127 (55.12%), Postives = 103/127 (81.10%), Query Frame = 1 Query: 4 DDCLLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 384 D+C F+++K K+ +R+IVFKIEEK ++V V+K+G ++Y D SLP ++CRYAV+D+DFVT +NC+KS+IFFIAWSP+ +++R+K++YA+SKD +R L+GI ELQATDP+EMG D+ +DRA Sbjct: 16 DECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLPVDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRVLEGIHYELQATDPTEMGFDIIQDRA 142
BLAST of FC925780 vs. ExPASy Swiss-Prot
Match: ADF9_ARATH (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 6.185e-40 Identity = 69/127 (54.33%), Postives = 101/127 (79.53%), Query Frame = 1 Query: 4 DDCLLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 384 DDC F+E+K K+ +R++V+K+EEK ++V V+K+G ++Y+D AASLP ++CRYAV+D+D+VT +NC+ S+IFFI WSP+ +R+R KM+YA+SK +R LDG+ ELQATDP+EMG D +DRA Sbjct: 3 DDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQDRA 129
BLAST of FC925780 vs. ExPASy Swiss-Prot
Match: ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 3.070e-39 Identity = 66/122 (54.10%), Postives = 102/122 (83.61%), Query Frame = 1 Query: 22 FLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 387 F ELK ++ +R+++FKI++++++++VEK G P ++Y+DF ASLPA++CRYAVYD DFV+ +NC+KS+IFFI+WSP +R+R+K IYA S+++F+ ELDG+ E+QATDP +M L+V + RAN Sbjct: 28 FWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLRGRAN 149
BLAST of FC925780 vs. ExPASy Swiss-Prot
Match: ADF5_ORYSJ (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica GN=ADF5 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.167e-38 Identity = 68/127 (53.54%), Postives = 101/127 (79.53%), Query Frame = 1 Query: 4 DDCLLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 384 ++C F+E+K K+ +RF+V+KI+E+ + V+V+K+G P + YE+ A+LP ++CRYAV+D+DFVT +NCQKS+IFFIAWSP +R+R+K++YA+SK +R LDG+ E+QATD SEMG DV + RA Sbjct: 16 EECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSKQGLRRVLDGVHYEVQATDSSEMGYDVIRGRA 142
BLAST of FC925780 vs. ExPASy Swiss-Prot
Match: ADF11_ARATH (Putative actin-depolymerizing factor 11 OS=Arabidopsis thaliana GN=ADF11 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.419e-36 Identity = 80/135 (59.26%), Postives = 98/135 (72.59%), Query Frame = 1 Query: 1 HDDCLLKFLELKAKRTYRFIVFKIEEKQKQVIVEKL------GEPTQTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 387 HDDC L FLELK +RT+R IV+KIE+ QVIVEK GE Q+YE+FA SLPA+ECRYA+ D +FV E +I FIAWSP TA++R KMIY+S+KDRFKRELDGIQVE ATD +++ LD + R N Sbjct: 4 HDDCKLTFLELKERRTFRSIVYKIEDNM-QVIVEKHHYKKMHGEREQSYEEFANSLPADECRYAILDIEFVPGER----KICFIAWSPSTAKMRKKMIYSSTKDRFKRELDGIQVEFHATDLTDISLDAIRRRIN 133
BLAST of FC925780 vs. ExPASy Swiss-Prot
Match: ADF3_ORYSJ (Actin-depolymerizing factor 3 OS=Oryza sativa subsp. japonica GN=ADF3 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.022e-34 Identity = 67/139 (48.20%), Postives = 99/139 (71.22%), Query Frame = 1 Query: 4 DDCLLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPAEECRYAVYDYDFVTAE-----------NCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 387 ++C +F EL+A R +RF+VFKI++ +QV+V+++G +++ ASLPA+ CRYAVYD+DF ++ +S+IFF++WSP A VRSKM+YASS + FK+ELDG+Q++LQATDPSE+ LDV KD + Sbjct: 12 EECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLKDHTS 150 The following BLAST results are available for this feature:
BLAST of FC925780 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925780 ID=FC925780; Name=FC925780; organism=Citrus clementina; type=EST; length=588bpback to top |