FC925790
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL2_METBF (50S ribosomal protein L2P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl2p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.263e-14 Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 ++P +AG YHK + + +P+V GVA+NPV+HP GGG +H G +TV R+APPG+KVGLI Sbjct: 167 DRPWLKAGKKYHKMKTRAAKYPRVSGVAMNPVDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLI 229
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL2_CENSY (50S ribosomal protein L2P OS=Cenarchaeum symbiosum GN=rpl2p PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.565e-14 Identity = 35/63 (55.56%), Postives = 42/63 (66.67%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 E+P AG + +FR K +P VRGVA HPHGGG HQH+G +STV R+APPG KVG I Sbjct: 167 ERPFMSAGGKWRRFRSKGRKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRNAPPGAKVGSI 229
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL8_ENCCU (60S ribosomal protein L8 OS=Encephalitozoon cuniculi GN=RPL8 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.269e-14 Identity = 33/64 (51.56%), Postives = 49/64 (76.56%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTV-RRDAPPGQKVGLI 191 +KPL +A A++K + + + +P+VRGVA+NPVEH HGGGNHQH+G +TV ++D QK+GL+ Sbjct: 162 DKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKPTTVSKKDISQEQKIGLV 225
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL2_NITMS (50S ribosomal protein L2P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.493e-14 Identity = 34/63 (53.97%), Postives = 40/63 (63.49%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 E+P AG + F+ K +P VRGVA HPHGGG HQH+G +STV RD PPG KVG I Sbjct: 168 ERPFMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRDTPPGAKVGSI 230
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL2_METB6 (50S ribosomal protein L2P OS=Methanoregula boonei (strain 6A8) GN=rpl2p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.493e-14 Identity = 32/61 (52.46%), Postives = 40/61 (65.57%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 185 EKP +AGN HK R + WP+VRGVA+N ++HP GGG HQH G T+ R PG+ VG Sbjct: 166 EKPFVKAGNKSHKMRNTASNWPRVRGVAMNVIDHPFGGGGHQHPGRPKTIARGTSPGRTVG 226
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL2_METBU (50S ribosomal protein L2P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl2p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.240e-13 Identity = 31/63 (49.21%), Postives = 45/63 (71.43%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 ++P +AG YHK + + +P+V G+A+N V+HP GGGN +H G +TV R+APPG+KVG I Sbjct: 167 DRPFLKAGKKYHKMKARAAKYPRVSGIAMNVVDHPFGGGNRKHPGKPTTVSRNAPPGRKVGHI 229
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL2_CALMQ (50S ribosomal protein L2P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl2p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.711e-13 Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 185 EKP +AGN YH+ R K +PKVRG A++ HPHGGG+HQ G + V+++APPGQKVG Sbjct: 170 EKPFVKAGNKYHRARTKAWKYPKVRGKAMSAYAHPHGGGSHQQGG--TPVKKNAPPGQKVG 228
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL2_METMA (50S ribosomal protein L2P OS=Methanosarcina mazei GN=rpl2p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.050e-12 Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 ++P +AG YHK + + +P+V VA+NP +HP GGG +H G +TV R+APPG+KVGLI Sbjct: 167 DRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLI 229
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL2_METAC (50S ribosomal protein L2P OS=Methanosarcina acetivorans GN=rpl2p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.050e-12 Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 ++P +AG YHK + + +P+V VA+NP +HP GGG +H G +TV R+APPG+KVGLI Sbjct: 167 DRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLI 229
BLAST of FC925790 vs. ExPASy Swiss-Prot
Match: RL2_PYRHO (50S ribosomal protein L2P OS=Pyrococcus horikoshii GN=rpl2p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.790e-12 Identity = 33/63 (52.38%), Postives = 41/63 (65.08%), Query Frame = 3 Query: 3 EKPLFRAGNAYHKFRVKRNCWPKVRGVALNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 191 EKPL +AG AY+K++ + WP RGV +N V HP GG H H G +T R APPG+KVG I Sbjct: 169 EKPLVKAGKAYYKYKARNKFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHI 230 The following BLAST results are available for this feature:
BLAST of FC925790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925790 ID=FC925790; Name=FC925790; organism=Citrus clementina; type=EST; length=360bpback to top |