FC925793

Overview
NameFC925793
Unique NameFC925793
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length585
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PRX2F_ARATH (Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana GN=PRXIIF PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 2.228e-26
Identity = 57/126 (45.24%), Postives = 82/126 (65.08%), Query Frame = 3
Query:  144 GKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESG-GDFTVSSADDIL 518
            GKKV++FG+PGA+T  CS +HVP +    D+ K+K +D ++C+SVNDPF +  WA+      +++F  D   K+  +LGL+ DLS   LG RS R++  V+D KVKA NVE    DF V+ A+ IL
Sbjct:   73 GKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDPFAINGWAEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGKVKAVNVEEAPSDFKVTGAEVIL 198          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PRDX5_MOUSE (Peroxiredoxin-5, mitochondrial OS=Mus musculus GN=Prdx5 PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 3.801e-26
Identity = 71/165 (43.03%), Postives = 98/165 (59.39%), Query Frame = 3
Query:   42 MAPIAVGDPLPDGILFYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 527
            MAPI VGD +P   +F   E +  ++V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A  LK+K    + C+SVND FV++ W +       V+ LAD +  +  A  L LD S   L    R +RF++++D+  VKA NVE  G   T S A +IL  L
Sbjct:   49 MAPIKVGDAIPSVEVF---EGEPGKKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAGALKAKGAQVVACLSVNDVFVIEEWGRAHQAEGKVRLLADPTGAFGKATDLLLDDSLVSLFGNRRLKRFSMVIDNGIVKALNVEPDGTGLTCSLAPNILSQL 210          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PRDX5_BOVIN (Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PRDX5 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 3.801e-26
Identity = 70/165 (42.42%), Postives = 99/165 (60.00%), Query Frame = 3
Query:   42 MAPIAVGDPLPDGILFYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 527
            MAPI VGD +P   +F   E++   +V++  L  GKK +LFG+PGAFTP CS  H+PGF+E+AD LK+K +  + C++VND FV + WA+       V+ LAD S  +     L LD S   L    R +RF+++++D  VK+ NVE  G   T S A +IL  L
Sbjct:   58 MAPIKVGDAIPSVEVF---EKEPGNKVNLAELFKGKKGVLFGLPGAFTPGCSKTHLPGFVEQADALKAKGIQVVACLTVNDVFVTEEWARAHKAEGKVRLLADPSGTFGKETDLLLDDSLLFLFGNHRLKRFSMVIEDGIVKSLNVEPDGTGLTCSLAPNILSQL 219          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PRDX5_HUMAN (Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=PRDX5 PE=1 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 4.202e-25
Identity = 70/165 (42.42%), Postives = 95/165 (57.58%), Query Frame = 3
Query:   42 MAPIAVGDPLPDGILFYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 527
            MAPI VGD +P   +F   E +   +V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A+ LK+K V  + C+SVND FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V D  VKA NVE  G   T S A +I+  L
Sbjct:   53 MAPIKVGDAIPAVEVF---EGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 214          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PMPA_CANBO (Putative peroxiredoxin-A OS=Candida boidinii GN=PMPA PE=1 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 4.202e-25
Identity = 68/167 (40.72%), Postives = 97/167 (58.08%), Query Frame = 3
Query:   42 MAPIAVGDPLP--DGILFYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIF--PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLK-VKAANVESGGDFTVSSADDILKAL 527
            MAPI  GD  P  D + +   E  +   + +      KK ++  VPGAFTP C+ +H+PG+I+    + SK VD +L IS NDPFV+K W K     + K + F++D + K T  LG  +DLS  GLGTRS R AL+V+    V+ A +E+GG+  VS+A  I+  L
Sbjct:    1 MAPIKRGDRFPTTDDVYYIPPEGGEPGPLELSKFVKTKKFVVVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVISQNDPFVLKGWKKELGAADAKKLVFVSDPNLKLTKKLGSTIDLSAIGLGTRSGRLALIVNRSGIVEYAAIENGGEVDVSTAQKIIAKL 167          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PRDX5_CERAE (Peroxiredoxin-5, mitochondrial OS=Cercopithecus aethiops GN=PRDX5 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.168e-25
Identity = 70/165 (42.42%), Postives = 94/165 (56.97%), Query Frame = 3
Query:   42 MAPIAVGDPLPDGILFYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 527
            MAPI VGD +P   +F   E +   +V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A+ LK+K V  + C+SVND FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V D  VKA NVE  G   T S A  I+  L
Sbjct:   54 MAPIKVGDAIPAVEVF---EGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVLACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPSIISQL 215          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PRDX5_PAPHA (Peroxiredoxin-5, mitochondrial OS=Papio hamadryas GN=PRDX5 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 9.362e-25
Identity = 70/165 (42.42%), Postives = 94/165 (56.97%), Query Frame = 3
Query:   42 MAPIAVGDPLPDGILFYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 527
            MAPI VGD +P   +F   E +   +V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A+ LK+K V  + C+SVND FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V D  VKA NVE  G   T S A  I+  L
Sbjct:   54 MAPIKVGDAIPAVEVF---EGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVLACLSVNDAFVTGEWGRAHKVEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPSIISQL 215          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PMPB_CANBO (Putative peroxiredoxin-B OS=Candida boidinii GN=PMPB PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 1.597e-24
Identity = 67/167 (40.12%), Postives = 96/167 (57.49%), Query Frame = 3
Query:   42 MAPIAVGDPLP--DGILFYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIF--PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLK-VKAANVESGGDFTVSSADDILKAL 527
            MAPI  GD  P  D + +   E  +     +      KK ++  VPGAFTP C+ +H+PG+I+    + SK VD +L I+ NDPFV+K W K     + K + F++D + K T  LG  +DLS  GLGTRS R AL+V+    V+ A +E+GG+  VS+A  I+  L
Sbjct:    1 MAPIKRGDRFPTTDDVYYIPPEGGEPGAFELSKFVKTKKFVVVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVITQNDPFVLKGWKKELGAADAKKLIFVSDPNLKLTKKLGSTIDLSSIGLGTRSGRLALIVNRSGIVEYAAIENGGEVDVSTAQKIIAKL 167          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: PRDX5_RAT (Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus GN=Prdx5 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.557e-24
Identity = 69/165 (41.82%), Postives = 93/165 (56.36%), Query Frame = 3
Query:   42 MAPIAVGDPLPDGILFYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 527
            MAPI VGD +P   +F   E +  ++V++  L   KK +LFGVPGAFTP CS  H+PGF+E+A  LK+K    + C+SVND FV   W +       V+ LAD +  +     L LD S   L    R +RF++++D   VKA NVE  G   T S A +IL  L
Sbjct:   52 MAPIKVGDTIPSVEVF---EGEPGKKVNLAELFKDKKGVLFGVPGAFTPGCSKTHLPGFVEQAGALKAKGAQVVACLSVNDAFVTAEWGRAHQAEGKVQLLADPTGAFGKETDLLLDDSLVSLFGNRRLKRFSMVIDKGVVKALNVEPDGTGLTCSLAPNILSQL 213          
BLAST of FC925793 vs. ExPASy Swiss-Prot
Match: MALF2_MALFU (Putative peroxiredoxin OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 8.762e-23
Identity = 59/166 (35.54%), Postives = 88/166 (53.01%), Query Frame = 3
Query:   54 AVGDPLPDGILFYFDEQDQLQQVSVHSLAA---------GKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKIFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVK--AANVESGGDFTVSSADDIL 518
            A G+ +PD ++ Y     +L    V  +           GKKV++  +PGA+TP C  +H+P  +++ DELK+K VD +  I+ NDPFVM AW         V F  D    ++ ALG  +DLS K  G R+ R+AL++DD K+   A++    G    +S D IL
Sbjct:    9 AKGNEIPDTLMGYIPWTPELDSGEVCGIPTTFKTRDEWKGKKVVIVSIPGAYTPICHQQHIPPLVKRVDELKAKGVDAVYVIASNDPFVMAAWGNFNNAKDKVVFATDIDLAFSKALGATIDLSAKHFGERTARYALIIDDNKIVDFASDEGDTGKLQNASIDTIL 174          
The following BLAST results are available for this feature:
BLAST of FC925793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PRX2F_ARATH2.228e-2645.24Peroxiredoxin-2F, mitochondrial OS=Arabidopsis tha... [more]
PRDX5_MOUSE3.801e-2643.03Peroxiredoxin-5, mitochondrial OS=Mus musculus GN=... [more]
PRDX5_BOVIN3.801e-2642.42Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PR... [more]
PRDX5_HUMAN4.202e-2542.42Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=... [more]
PMPA_CANBO4.202e-2540.72Putative peroxiredoxin-A OS=Candida boidinii GN=PM... [more]
PRDX5_CERAE7.168e-2542.42Peroxiredoxin-5, mitochondrial OS=Cercopithecus ae... [more]
PRDX5_PAPHA9.362e-2542.42Peroxiredoxin-5, mitochondrial OS=Papio hamadryas ... [more]
PMPB_CANBO1.597e-2440.12Putative peroxiredoxin-B OS=Candida boidinii GN=PM... [more]
PRDX5_RAT3.557e-2441.82Peroxiredoxin-5, mitochondrial OS=Rattus norvegicu... [more]
MALF2_MALFU8.762e-2335.54Putative peroxiredoxin OS=Malassezia furfur PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YO12FM1 TF Citrus clementina cDNA clone KN0AAP3YO12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925793 ID=FC925793; Name=FC925793; organism=Citrus clementina; type=EST; length=585bp
CGTGTATTTAACCTTTAGGGCGGATCAGATTCTATCTCTAAATGGCTCCT
ATCGCAGTCGGTGACCCCTTGCCGGACGGTATTCTCTTTTACTTCGACGA
ACAAGATCAGTTGCAGCAAGTGTCCGTACACTCGCTCGCTGCCGGTAAAA
AGGTCATCCTCTTTGGCGTCCCCGGTGCTTTCACTCCTACTTGCAGCTTG
AAGCATGTGCCTGGATTCATCGAGAAGGCTGATGAGTTGAAGTCAAAAGA
CGTCGATGAAATTCTCTGCATAAGCGTTAATGACCCATTTGTGATGAAGG
CATGGGCCAAAATATTTCCTGAGAACAAGAGCGTGAAGTTCCTGGCTGAT
GGCTCAGCAAAATACACCCATGCTTTGGGGCTTGAGCTTGACCTCAGTGA
GAAAGGACTTGGCACCCGGTCAAGGAGGTTTGCTCTCTTGGTTGATGACC
TCAAGGTGAAGGCCGCAAATGTTGAATCTGGTGGAGATTTCACAGTCTCC
AGTGCTGATGACATCCTCAAGGCTCTTTAAATTTGCAGTTCCATCCCAGC
TGCTTAGTGTTGGTTGAGTTATTACTTCCTTTTTG
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