FC928830

Overview
NameFC928830
Unique NameFC928830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length749
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC928830 vs. ExPASy Swiss-Prot
Match: DCR_ARATH (BAHD acyltransferase DCR OS=Arabidopsis thaliana GN=DCR PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.332e-15
Identity = 56/139 (40.29%), Postives = 76/139 (54.68%), Query Frame = 3
Query:  261 MKEALSNVLVPFYPVAGRLQKDERGRIEILCNGE-----GVLFSEAEASCV-IDDFGDFSQGSKLLPLVPSVDHAN-DISSSPLMLTQVTHFKCGGACIGLRLNHTLVDGLSAYHFVNSWAEITRGV-PITIQPLFDRT 653
            +K+ L  VL  FY +AG+L KD+ G   +  + E     GV FS A A+ V +DD       +K   LVP     N +  S PL+  QVT  K  G  +GL  NH ++DG S +HF++SWAEI RG   I+ QP  DR+
Sbjct:   65 LKDGLGLVLEDFYQLAGKLAKDDEGVFRVEYDAEDSEINGVEFSVAHAADVTVDDLTAEDGTAKFKELVPYNGILNLEGLSRPLLAVQVTKLK-DGLAMGLAFNHAVLDGTSTWHFMSSWAEICRGAQSISTQPFLDRS 202          
BLAST of FC928830 vs. ExPASy Swiss-Prot
Match: SALAT_PAPSO (Salutaridinol 7-O-acetyltransferase OS=Papaver somniferum GN=SALAT PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.553e-12
Identity = 55/181 (30.39%), Postives = 85/181 (46.96%), Query Frame = 3
Query:   90 IHVRKSTMIRPSQETPKHC--LKVSDLDLLVPSVY-VPTVYFYGRGGPNEC--SFNFFDAGLMKEALSNVLVPFYPVAGRLQKDERGRIEILCNGEGVLFSEAEASCVIDDFGDFSQGS-KLLPLVPSVDHANDISSSPLMLTQVTHFKCGGACIGLRLNHTLVDGLSAYHFVNSWAEITR 614
            + V     I+P+  TP       +S LD   P  Y VP + FY     N    S +  D  L+K +LS  LV FYP+AGR+  +    I + C+ +G+ F + +    + +F   SQ    L  L+PS   +  +    L++ QV  F CGG  I   ++H + D  +   F+ SWA  T+
Sbjct:    9 VEVISKETIKPTTPTPSQLKNFNLSLLDQCFPLYYYVPIILFYPATAANSTGSSNHHDDLDLLKSSLSKTLVHFYPMAGRMIDN----ILVDCHDQGINFYKVKIRGKMCEF--MSQPDVPLSQLLPSEVVSASVPKEALVIVQVNMFDCGGTAICSSVSHKIADAATMSTFIRSWASTTK 183          
The following BLAST results are available for this feature:
BLAST of FC928830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
DCR_ARATH6.332e-1540.29BAHD acyltransferase DCR OS=Arabidopsis thaliana G... [more]
SALAT_PAPSO6.553e-1230.39Salutaridinol 7-O-acetyltransferase OS=Papaver som... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YK17FM1 TF Citrus clementina cDNA clone KN0AAP1YK17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928830 ID=FC928830; Name=FC928830; organism=Citrus clementina; type=EST; length=749bp
AAACCAAATTTTGTTTCAAGCTCGGACTCGCCCGTAGCTCCCAGTCACAG
CCACTCCTTTCTGTCACTCCTGGCGCTAACACAATGGAAATCCACGTAAG
GAAGTCTACAATGATACGCCCTTCTCAAGAAACACCCAAACATTGCCTAA
AAGTTTCCGATTTGGACTTGTTAGTCCCATCAGTCTACGTGCCTACAGTG
TACTTCTATGGGCGCGGGGGCCCAAATGAATGTTCTTTCAATTTCTTTGA
TGCTGGTTTGATGAAGGAGGCTTTGAGCAACGTTCTCGTGCCGTTTTATC
CGGTGGCCGGAAGGTTGCAAAAGGATGAAAGGGGAAGAATTGAGATACTG
TGCAATGGAGAGGGAGTTTTGTTCTCGGAGGCCGAAGCCAGTTGTGTTAT
TGATGATTTTGGTGACTTCTCACAAGGCTCAAAGCTTTTGCCGCTTGTTC
CGTCTGTGGATCATGCCAATGATATATCCTCTTCCCCACTCATGCTGACA
CAGGTAACTCATTTCAAGTGTGGAGGCGCATGTATTGGACTCAGATTGAA
TCATACATTGGTAGATGGTCTTTCAGCATACCATTTCGTCAACTCTTGGG
CTGAGATTACACGTGGTGTTCCTATTACGATTCAACCATTATTTGATCGA
ACTATACTAGGTGTTGGGGTCCCAAATTCTCCTAAATTCCATCACATTGA
ATATGACCCACCTCCAACTTCCCTAAATACTACTATTTCTCAAACTTCT
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