FC929015
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929015 vs. ExPASy Swiss-Prot
Match: RLP7_YEAST (Ribosome biogenesis protein RLP7 OS=Saccharomyces cerevisiae GN=RLP7 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.650e-23 Identity = 62/131 (47.33%), Postives = 79/131 (60.31%), Query Frame = -1 Query: 352 LLFIIRIRGINAVDPKTK--KILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY------GKLNKQRIALTDNSIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPF 720 LLFI+R+RG AV+ K KIL LLRL + GVF+K+ K +L + PYV G P+L S++ LI KRG + I L DN+I+E+ LG HGIIC+ED IHEI T+G F N FL PF Sbjct: 141 LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPF 271
BLAST of FC929015 vs. ExPASy Swiss-Prot
Match: RLP7_CANGA (Ribosome biogenesis protein RLP7 OS=Candida glabrata GN=RLP7 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.065e-22 Identity = 56/136 (41.18%), Postives = 87/136 (63.97%), Query Frame = -1 Query: 352 NPEAKLLFIIRIRGINA--VDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRG---YGKLNKQR---IALTDNSIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPF 735 N E +LLF++R++G A + K +IL LRL ++ VF+K+ + T ++L + PYV G P+LKS++ LI KR Y + +++ I L DN+I+E+ LG G+IC++D IHEI T+G +F + N FL PF Sbjct: 131 NGEEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVGKPSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATLGENFTKCNFFLQPF 266
BLAST of FC929015 vs. ExPASy Swiss-Prot
Match: RLP7_KLULA (Ribosome biogenesis protein RLP7 OS=Kluyveromyces lactis GN=RLP7 PE=3 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 5.309e-22 Identity = 57/134 (42.54%), Postives = 80/134 (59.70%), Query Frame = -1 Query: 352 EAKLLFIIRIRGINAVD--PKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNK------QRIALTDNSIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPF 729 E LLF+IR++G AV K K+L LLRL ++ GVF+K+ K +L V PY+ G P+L S++ LI KR + + I L DN+I+E+ LG G+IC+ED IHEI T+G +F + FL PF Sbjct: 134 EPSLLFVIRVKGPTAVKIPAKAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKRSRIMWQRPEDKEPKEIILNDNNIVEEKLGDEGVICIEDIIHEISTLGENFSKCTFFLLPF 267
BLAST of FC929015 vs. ExPASy Swiss-Prot
Match: RLP7_ASHGO (Ribosome biogenesis protein RLP7 OS=Ashbya gossypii GN=RLP7 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.666e-21 Identity = 53/133 (39.85%), Postives = 78/133 (58.65%), Query Frame = -1 Query: 352 AKLLFIIRIRGINA--VDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY------GKLNKQRIALTDNSIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPF 726 A LLF++R+RG A + K ++L LLRL ++ GVF+++ +L V PYV G P+L S++ L+ KR G+ + L DN ++E+ LG G+IC+ED IHEI T+G F + N FL PF Sbjct: 110 ATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGRPSLASIRALVQKRARVVHQRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIHEIATMGEAFAKCNFFLLPF 242
BLAST of FC929015 vs. ExPASy Swiss-Prot
Match: RL7_ENCCU (60S ribosomal protein L7 OS=Encephalitozoon cuniculi GN=RPL7 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.221e-19 Identity = 53/168 (31.55%), Postives = 94/168 (55.95%), Query Frame = -1 Query: 244 FYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRN-PYVEGGDAGNREDYINELIRRM 744 FYV EA+ +I IR PK +K+L+L RL++I V ++ NK+T ML ++ +V +G ++ +++L+Y +G G+ R+ LT+ I + G+ I C+E+ +H I FK+ N+FL+PF +++ + +GG GN +D ++ L+ RM Sbjct: 73 FYVPKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSGRNGHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGTEMFKKVNSFLYPFHLSPPRGGFKGQKSKSFNDGGSVGNHQDLLSNLLERM 238
BLAST of FC929015 vs. ExPASy Swiss-Prot
Match: RLP7_DEBHA (Ribosome biogenesis protein RLP7 OS=Debaryomyces hansenii GN=RLP7 PE=3 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.494e-19 Identity = 56/136 (41.18%), Postives = 82/136 (60.29%), Query Frame = -1 Query: 352 AKLLFIIRI----RGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY-----GKLNKQRIA-LTDNSIIEQALGQH-GIICMEDFIHEILTVGPHFKEANNFLWPF 726 AKLLFIIRI +G+ V K +K+L LLRL + GVF+K+ AT+ +L + PY+ G P+L S+++L KR + + RI L +N ++E G G IC+ED IHE+ T+G HFK +N++ PF Sbjct: 92 AKLLFIIRIPDHTKGLK-VPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKRACISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIHELATLGEHFKTVSNWILPF 226
BLAST of FC929015 vs. ExPASy Swiss-Prot
Match: RLP7_PICJA (Ribosome biogenesis protein RLP7 (Fragment) OS=Pichia jadinii GN=RLP7 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16 Identity = 49/131 (37.40%), Postives = 77/131 (58.78%), Query Frame = -1 Query: 352 LLFIIRIRG-INAVDP-KTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKL------NKQRIALTDNSIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPF 720 L I+R G + A P K +K+LQLLRL +I +GVF+K+ + +L + PY P+L++V++L+ KR + +++ L DN+++E+ LG GIIC+ED IHE + FK +FL PF Sbjct: 32 LYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTVIXQPSLQTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIHETSHLATTFKTVTHFLDPF 162 The following BLAST results are available for this feature:
BLAST of FC929015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929015 ID=FC929015; Name=FC929015; organism=Citrus clementina; type=EST; length=744bpback to top |